Esab025016.1
Basic Information
- Insect
- Eumerus sabulonum
- Gene Symbol
- ZIPIC
- Assembly
- GCA_951905685.1
- Location
- OX645062.1:55269329-55271704[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 0.78 1.4e+02 4.4 1.0 2 23 187 207 186 207 0.95 2 15 9.1 1.6e+03 1.0 5.6 1 23 213 236 213 236 0.86 3 15 0.00034 0.061 14.9 1.8 1 23 245 268 245 269 0.96 4 15 0.0013 0.24 13.1 1.6 2 23 275 297 274 297 0.95 5 15 2.8 4.9e+02 2.6 0.1 3 11 306 314 305 318 0.89 6 15 5e-05 0.0089 17.5 1.9 2 23 344 365 343 365 0.98 7 15 0.027 4.7 9.0 0.9 1 13 371 383 371 384 0.89 8 15 0.36 63 5.4 5.5 2 23 403 424 402 424 0.95 9 15 0.052 9.3 8.1 0.3 1 21 432 452 432 455 0.87 10 15 0.0011 0.2 13.3 0.7 1 20 462 481 462 482 0.95 11 15 1.7e-05 0.0031 19.0 1.2 1 23 491 513 491 513 0.97 12 15 1.3e-07 2.3e-05 25.7 0.3 3 23 520 540 518 540 0.97 13 15 0.002 0.36 12.5 2.5 1 23 546 568 546 568 0.98 14 15 0.037 6.5 8.5 7.5 1 23 573 595 573 595 0.97 15 15 0.016 2.8 9.7 0.2 1 23 600 623 600 623 0.96
Sequence Information
- Coding Sequence
- ATGGATTCGTCATTGATTTGTCGCGCATGTTTAACTACGATTTCCCTCGAGTACATCGATTTAGAAACTCCAATATACGAGAGTACAACATTTTTGGATTGCTTCAAGTTTTGCACTAAACTACAAGCACACTTGGATGATGAATTGCCAAATAATATTTGTGTGACTTGTGGCAAATCACTGCAGGTAGCGTATGAGTTTATCAAAGCATCTATCGAAGCGGATCGTGCCTTGCGAGATAGCTTGTCCAGATTTGGTGATTTGTATCATTTGGACAAAACAACCAACTTGGACTCGATGATGATAAAAAAGGAAGAAGATAATTGCGAGAAGCAGGAACTCGAATTTCATACGATAAGCGAGGATGACTACTATTACATGGAAATTAAGGAGGAAAAAGATAAACAACAAGAGTTCCCTGCATTCGAGGTGGTGATTTCTAATGAAAAACCCGATGCTGGTGGAGGCTATGATATGTGGCTGTCTGCGAATGATGACGACGGCACATTGTCGGATGTCAAACTAGAGAACGACCAAATCGATGAGGATTCATATAAAAGCTGCACCATTTGCACGAAAAAGATTCACGAGGATGAGTACGAGGGACATATAAATATGCACAGAGGTCAAAAACCTTATAACTGCGATAAATGTGATGAAAAGTTCTTTTGCAAAAAGAGAATGGAAATCCATAAGAAATCAAAGCACAAGAAAAACCGACGTCAGGATACTTACGTTTGTGGATGGTGTGGTGAGACGTTCGACCTTAGATCAAAATTATGCCAACACCGACTGGTAGACCATCATGGTAAAGTACCAACATCATGCTTAACATGTGGCGAAGAATGCTCAGATGAAACTAGCTTACGGCGTCATGTTAAGAAGGAACACGGAACTACAAAAAAACCAGTACTATGCACATATTGCAATAAAGAATATAAGGGCATATCACTTCATATAAAGAACAGTCATCCCGATGTTCTGCGTATTCCCTTGCCGGAAGGCGGTTATGCAGAATTGTCGCCAAATCAATGCCCTTATTGTTATCGTTACTTTCAAAGCAAGACCAGTCTCAACTATCACATGAATACACACACAGGTGAACGACCATATTCGTGCTCTATCTGTGGTAAAAAATTCCATAACAAGATAATATGTGACAGACATGAACGCGCCGTACATCAATCTAAGGACGCACCAAAAATGAAATGCGATTGCTGCGATTTCACTTCGTCTAATATTCATTCCTTGAGATCTCACATGCAACGTCATTTTAAACCGACCGAAAAGAAATATCTCTGCTCGTTTTGTCCTGTGAGATTCATCAACCCAAAAATGCTTTACATTCACGAGGAGTTCAAACACCGCAACGGAAAAAAGAAATACGAATGTGATGTGTGTCAGAAGAAATTCGCTATGAAACGGAAGCTGAAAGATCATAAACTATGCGTTCATGTGAATGGACGGCCATACGCATGTTCCGAGTGTAATAAAACATTTAAAAACGATTTCCAATTGAAAGCACATGAAAAACTACACTTGGAACGGGATATCGATTGTCCGCAGTGTGAGAAGAAGTTCGCTCGTCAAGCTGATCTAAAGATTCATATGCGAACGCATACGGGCGAGTTGCCGTATGAGTGTCACTTGTGCGACAAACGATACGCAATTAAAGTAAGACTTACCTATCATCTGCAGAAACACATGGGCGTCATGCATAAATGCCAGCATTGTTCAAGTGAATTCAATAGTCGAAGTAAGCTACGTATGCACTTGTTTAAGCATATCGGCATGCCGTATAACTGTGATACCTGCAATCTTGGATTCCCAAGCCGTGTGGGGGCACGTCGGCATGCGAAAAGTACCCACAAGATCATTTTAAGTGATGAAGACTTGATGGAAAACCGTCGGAAAAACGAAAAGAACATGCTCAAGGACGTACAAAGCACAAGCATCCTCATTTTGCCAAACAAGTCCAGTCTCGACGACGAGATCGAAATGTAA
- Protein Sequence
- MDSSLICRACLTTISLEYIDLETPIYESTTFLDCFKFCTKLQAHLDDELPNNICVTCGKSLQVAYEFIKASIEADRALRDSLSRFGDLYHLDKTTNLDSMMIKKEEDNCEKQELEFHTISEDDYYYMEIKEEKDKQQEFPAFEVVISNEKPDAGGGYDMWLSANDDDGTLSDVKLENDQIDEDSYKSCTICTKKIHEDEYEGHINMHRGQKPYNCDKCDEKFFCKKRMEIHKKSKHKKNRRQDTYVCGWCGETFDLRSKLCQHRLVDHHGKVPTSCLTCGEECSDETSLRRHVKKEHGTTKKPVLCTYCNKEYKGISLHIKNSHPDVLRIPLPEGGYAELSPNQCPYCYRYFQSKTSLNYHMNTHTGERPYSCSICGKKFHNKIICDRHERAVHQSKDAPKMKCDCCDFTSSNIHSLRSHMQRHFKPTEKKYLCSFCPVRFINPKMLYIHEEFKHRNGKKKYECDVCQKKFAMKRKLKDHKLCVHVNGRPYACSECNKTFKNDFQLKAHEKLHLERDIDCPQCEKKFARQADLKIHMRTHTGELPYECHLCDKRYAIKVRLTYHLQKHMGVMHKCQHCSSEFNSRSKLRMHLFKHIGMPYNCDTCNLGFPSRVGARRHAKSTHKIILSDEDLMENRRKNEKNMLKDVQSTSILILPNKSSLDDEIEM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -