Esab032660.1
Basic Information
- Insect
- Eumerus sabulonum
- Gene Symbol
- -
- Assembly
- GCA_951905685.1
- Location
- OX645064.1:11128733-11132390[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 21 1.1 2e+02 3.9 1.1 2 23 167 189 166 189 0.95 2 21 0.011 2 10.2 4.8 2 19 232 249 231 252 0.91 3 21 0.049 8.7 8.1 0.0 3 23 293 314 292 314 0.95 4 21 0.0037 0.66 11.7 3.7 2 23 321 342 320 342 0.96 5 21 0.00053 0.094 14.3 6.0 1 23 348 370 348 371 0.96 6 21 0.00012 0.022 16.3 3.5 1 23 377 400 377 400 0.95 7 21 0.16 28 6.6 0.1 1 21 409 429 409 430 0.91 8 21 0.00064 0.11 14.1 0.1 1 23 446 468 446 468 0.97 9 21 0.03 5.3 8.8 0.7 1 23 473 495 473 495 0.95 10 21 0.1 19 7.1 0.9 1 23 511 535 511 535 0.95 11 21 4.2e-06 0.00074 20.9 0.7 1 23 541 563 541 563 0.98 12 21 0.0012 0.21 13.2 0.8 1 23 569 592 569 592 0.96 13 21 0.0022 0.38 12.4 0.8 2 23 598 620 597 620 0.93 14 21 6.1e-06 0.0011 20.4 1.0 2 23 624 646 623 646 0.96 15 21 0.00019 0.033 15.8 0.8 1 23 652 675 652 675 0.95 16 21 0.089 16 7.3 1.3 1 23 680 702 680 702 0.97 17 21 0.65 1.1e+02 4.6 10.3 1 23 708 730 708 730 0.92 18 21 3.4e-05 0.006 18.1 0.3 1 23 736 761 736 761 0.96 19 21 0.063 11 7.8 1.3 1 19 798 816 798 817 0.96 20 21 0.51 91 4.9 8.9 1 23 826 848 826 848 0.94 21 21 0.016 2.9 9.7 0.5 1 23 854 879 854 879 0.95
Sequence Information
- Coding Sequence
- ATGGAAGTTAAGTGTGTACGTTGCGACACGATTTTGGTGGGTGATTACCAGCTGATCTTTGACGAGATCGGCGTCGAGCTGAAACTGGACAAACTTCTCGAGGAGTTTTTTGAAATCACCATCGAAGAGAATGCAACAATCACTCAGGCACTGTGCGAGGAGTGTGTAAGTGCACTAACTGAACTGTACGACATCAGTCAGAGGGATCGTCAAGCTACCGAGGGAGATGATCAGCCAGTGGACGACGATGTTCAATTTGATGATCAAGATTATATCGTAGAGGAGTTGAACGAGGATGATGCGGCGAATATTGAGCAAAGTGATTCTAACTCACTGGATGGTGGTCATTCTTCAGATGCCAGCACGAACGCTGTCGAAACACTGGATAGTGCGGTGGTCACGGATGGCGTGTGGTATGTAGATGACATCAATACGCAAGAGTATGTCAAGGAGGTGATCAAAACGGAGCTGCAAGAGATCACGTTTGAGCAGAATACCGTGTGTAGATTCTGTGACGAGGTGCTGAAAACTCATACCGCAGTCCTGATGCATACGTCGACAAGCCATGAAACCGATAACAAATCGTATCCGTGTATCATATGCGATAAGGTCGAGGAAGTCAAGACAATTAACGACTTAGCGTACCACATTGTCCTGAAACACTACGCCTTGGAAGCAATCACCATTTACTGTACGTGTCCCGAGTGCGGAAAGCGATTCTCTAACTTTCTCGAGTACAACAAGCACTCGTGCTACCGGAAAACGGTCGGCAATCGACTGCTGCAGGAATGTGTGCCGTGTCATAAGAAATTCGCGTCAAATAAGAGGTACCGCTTTCACCTGCAATTCCATTTGGAGAAACGTCGACCAAAGGCGTGCCTAATCTGTGACATTTTGTTCAGCGATGAAAACGAATTTTTCGAGCATATAATGTACGCCCACGAAAAGGAGGATTCGCTGATATGCAAAAAATGTGATCGTATCTGcacgtcaagcaaatcgtacaagAATCACGTCAAGCTTCACAGCGCGATTCGGTCATTCAAGTGCAAATACTGTACGAAATCGTACTTCTACAAGCAGATGTTGGTCAATCATATCCAACGACATCACACGCAGAAAAAGCACCACATATGCACCAAATGCGACAAGGCGCTGGCGAACAAACACCTGCTGACGAGGCATATGCAATTGAAACACGGCGAAGACCTCGAGGCAGACGTATACGTCTGTTCCGACTGTGGACATGTGGGCAAATCCGAGAAAGACACACTGGAACACATTAAAGAAAATTGCGCCGATGCCAATGCAATCAAGGAGCACTCTAAGATCGCCTATGCCTGTGAGTACTGCGAAGCGGCATTCAATACCATAGACAGCTTACAACTCCATCGGAAGGAGCACAGCAACAAAATGTTCTTGTGCTGGATATGCTCGAGTGAATATTCGGAATATAAGAAGCTCAAGACGCACATAATGACGCACACTAAGTGCGAACCGATACACAAAACGTTTCCCGTGAGCAGGCACTACGTGTGCGACTATAAGTCGTGCAACAAGTCCTACTTGACGTGGCCCACTCTACGGGCGCACAAAACACGCCACAAGGCTGACGCCAAGTTCACCTGTGACGTATGTGAGCAAACGTTCCGCACGCAAACCCTTCTCAACAATCACATAAAGGCGCACGAAAACAACGAGGAGTACCCATGCCAGTTCTGCTCGAAAATGTGCAGTTCACAAATGGCCTTGGCAGTCCACATCGCCCGAAAGCACAACAACAATTGTATAACATGTCCGCACTGTAAGAATACCTACAATAGCGAGGAATCGCTTAAGGAGCATATCGACCTGAATCACATCAAGTTAACCTGCGAGCATTGCGGCAAGGAGACCAAGAATAAGCGAAACCTTGAGATCCATATCCAAATGGTTCACACCAAGATCAAACGATTCTTTTGCTCGCAATGCGGCAAGGGCTACTACAACAGAGGTGATCTTAAAGTCCACGAAACGACGAGCCATTCGGGGTCGCGATTCAAATGTGAACATTGCGACTTCACCACGGGCTATGAGATCTCAATTAAAGCGCACACCCTCATGCATGCCTCTACGAAACCATTCAAATGCGAACATTGTGCTAAGGAATTCACCCGAAAGACGTGCTTTAAACTGCATTGCCTGAGACATGCCAACCACAAACCATTTTCCTGCCCGGTGGAGGACTGTGGAAAGCACTTTGTCACGCGGGGAGTCCTCAATACCCACATACGCGACAGTCACCAAAAAGGTGTTGGCAAGTCGAAACGAAAACATGTAGGCCAAGAAACACTCAAGGACAAAGAGGGTGAGCTTGAGGTCCATGACACGACGATCCATTCGGGACCGCTTTTCAAATGTGATCAATGTGAATTCACCACGACCCAGGAGACGTCGTTTAAAGCGCACACTCCCGACGATGCTTCTACAGAACTATTTAAATGCGACCAATGTGCTAAAGAGTTCACCCGAAAAACGTGCTTTAAACTGCATTGCCAAAGGCACTCCAACGACAAATCATTTCCCTGTCCAGTCGAGAATTGTGGGAAGCACTTTCTCACGAAGCGAATTCTCAATGCCCACATGCGTGACAGTCATCAAAAAGGTGTTGGCAAGTCCGGACGATTAACCAAACGGCAGCATGCTAGCCAGGAAACACCATCGATCGATGAGGGTGATCATCACAGCGAACCAAAATACATTATGGTGGAAATCGATTCCAACACCATACCAGTTAGAATAGACGATAATGCTGTGGTGATCTACGAAGAAGTCCAATGGTAA
- Protein Sequence
- MEVKCVRCDTILVGDYQLIFDEIGVELKLDKLLEEFFEITIEENATITQALCEECVSALTELYDISQRDRQATEGDDQPVDDDVQFDDQDYIVEELNEDDAANIEQSDSNSLDGGHSSDASTNAVETLDSAVVTDGVWYVDDINTQEYVKEVIKTELQEITFEQNTVCRFCDEVLKTHTAVLMHTSTSHETDNKSYPCIICDKVEEVKTINDLAYHIVLKHYALEAITIYCTCPECGKRFSNFLEYNKHSCYRKTVGNRLLQECVPCHKKFASNKRYRFHLQFHLEKRRPKACLICDILFSDENEFFEHIMYAHEKEDSLICKKCDRICTSSKSYKNHVKLHSAIRSFKCKYCTKSYFYKQMLVNHIQRHHTQKKHHICTKCDKALANKHLLTRHMQLKHGEDLEADVYVCSDCGHVGKSEKDTLEHIKENCADANAIKEHSKIAYACEYCEAAFNTIDSLQLHRKEHSNKMFLCWICSSEYSEYKKLKTHIMTHTKCEPIHKTFPVSRHYVCDYKSCNKSYLTWPTLRAHKTRHKADAKFTCDVCEQTFRTQTLLNNHIKAHENNEEYPCQFCSKMCSSQMALAVHIARKHNNNCITCPHCKNTYNSEESLKEHIDLNHIKLTCEHCGKETKNKRNLEIHIQMVHTKIKRFFCSQCGKGYYNRGDLKVHETTSHSGSRFKCEHCDFTTGYEISIKAHTLMHASTKPFKCEHCAKEFTRKTCFKLHCLRHANHKPFSCPVEDCGKHFVTRGVLNTHIRDSHQKGVGKSKRKHVGQETLKDKEGELEVHDTTIHSGPLFKCDQCEFTTTQETSFKAHTPDDASTELFKCDQCAKEFTRKTCFKLHCQRHSNDKSFPCPVENCGKHFLTKRILNAHMRDSHQKGVGKSGRLTKRQHASQETPSIDEGDHHSEPKYIMVEIDSNTIPVRIDDNAVVIYEEVQW
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -