Basic Information

Insect: Eumerus sabulonum
Gene Symbol: -
Assembly: GCA_951905685.1
Location: OX645060.1:6922063-6924098[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.00027 0.047 15.3 0.8 2 23 98 119 97 119 0.96

2 10 0.034 5.9 8.7 2.4 1 23 199 222 199 222 0.92

3 10 8 1.4e+03 1.2 0.8 2 22 230 250 229 250 0.82

4 10 5.6e-07 9.8e-05 23.7 2.8 1 23 299 321 299 321 0.96

5 10 2e-08 3.5e-06 28.3 1.6 1 23 328 350 328 350 0.99

6 10 3.5e-05 0.0063 18.0 3.2 3 23 365 385 364 385 0.94

7 10 1.8e-06 0.00033 22.1 0.4 1 23 391 413 391 413 0.99

8 10 3.6e-07 6.3e-05 24.3 0.2 1 23 419 441 419 441 0.98

9 10 3.4e-07 6.1e-05 24.4 1.1 1 23 445 467 445 467 0.99

10 10 0.13 23 6.8 0.4 2 20 474 492 473 497 0.88

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.00027	0.047	15.3	0.8	2	23	98	119	97	119	0.96
2	10	0.034	5.9	8.7	2.4	1	23	199	222	199	222	0.92
3	10	8	1.4e+03	1.2	0.8	2	22	230	250	229	250	0.82
4	10	5.6e-07	9.8e-05	23.7	2.8	1	23	299	321	299	321	0.96
5	10	2e-08	3.5e-06	28.3	1.6	1	23	328	350	328	350	0.99
6	10	3.5e-05	0.0063	18.0	3.2	3	23	365	385	364	385	0.94
7	10	1.8e-06	0.00033	22.1	0.4	1	23	391	413	391	413	0.99
8	10	3.6e-07	6.3e-05	24.3	0.2	1	23	419	441	419	441	0.98
9	10	3.4e-07	6.1e-05	24.4	1.1	1	23	445	467	445	467	0.99
10	10	0.13	23	6.8	0.4	2	20	474	492	473	497	0.88

Sequence Information

Coding Sequence: ATGGACACGACGGAGGAGGATTATTCTCAGGACGAAGAAAACCTGGACAACGAGGATGAGCAGTCATCACAAGATTCCGACAAGTGGAGTCAAAGGCGTTCGACCAGAAAACGACCAAGAACTTACCCCAACGCTTCGAAAAGGAAGAGGCGGAAACGTCGTCTGCAGCCCAAGGATATCAAAAACGAGGACGAAAGCGACGCGCATGTCGAAGATGAGTCCACAGTAGAACCTGCTGTGCTGACAGACATCGAAGAGGATGAGTGCATCCCGAATGGCTGCAAATCAATCGAGTGCTTCATATGCGGCTGTAGACTGAGTCGGATATACAACCTCCGAATCCACATGGAATCCCACACCGAGGTAGACTCATACGACAAGGAAGCGTTCGAGAACTCAGAGATATTCAATATCCTTAACCCGCACAAGCGAAACATTGATTCGAACATCATCAGAAACTTTATAATCCAAGAAATCAAAGCAAAGCGTTATTCGCAATTCTACTGCATCCTCAACGAGGCAGCCGTTGAGCTACACATCAGCGACTCGGAAACGGACTCGGATAGTGCGAGCGACTTAATCCCCCGGAACAACTACCGCTGCGAGTTGTGCAAAAAGAACTTTGACCGTCGCTACAAGGCGCTCTTTCATCAGAAAACCGCCCACACAAAGTCCGAATTCGCCGTCGAGTGCGACTATTGCATGAAAAAGTTCGTCTGCATGAACCTTCTTATCTACCACCTCAAAACACAATGCGAGAGTGACGAGAAACCCGTGCCGTGTACTGAGCGCTTCATGAAATTCCTCCTCAAAGCCAATCTCGACCATTATGCAAGTCTGGCGCAAGCCAGAGAACAGAAAAAACTTCGCAAAATGACCGAAGCGCCAAAGCAGTACGTTTGCAACACGTGTAACAAGACATTCACTCGTCAAGAGCACCTGACCCGCCACAGTGCTGTGCACCTTCCGGATGAGATGAAATTCGAATGTCCGATCTGTGACCGGAGGTTCAATCGTAAGGACAACATGCGGTCGCATATGAAAACCCATACCGAGGAGGGTTCTCGCAGTGCGGAATCTCAAAAGATTCTCTGTTCCTGCTGCGGTCGGAGCTTCACCAGCAAATCGAACTATGTTGTGCACATGCGCCGCCACACCGGAGAAAAACCGTACAAATGTGATGTATGCGGTAAGGGCTTCCCCAAGTCTACAGATCTGAATTCCCACAAAATCACCCACACGGGGGAGAAGAACTTTGTGTGTACGATTTGCAATAAGGCGTTTGCCCGATCGGCGGTTCTATCGAAGCATATGCGCGTCCACAATGGTCCCTACGAGTGTACGTTTTGCAAAAAAACATTCGCAAAGCCAAGTGCCTTGACGCTGCATTTGCGAACGCACACGGGCGGTCGATTGTGCGTATGTGTCGCATGCAGTAAAGCCTTTGACACGAAGACTGAATTAGACGCGCATTTCGCGTTAACGGGGCATGATTGCGAGTCAAAACCACCGATCAGTGCTCAACGTTGTTCAGTGGCAGAAAAAGCATTTAAGAATGCACAAGTGGATCCTCCGGCGATTTCGATTTCACCAGAACCACCTCAAGCGAACATCGACAACCACGTGAAGAGGAACAGCGATCCCTTAGAGATAAACGAATACGAGTGGCGTACAACTAAAGTGAAAGTGCCTGTAAATGAAGCCATCCAGAGTGTCCTACAGAGATCCACCGGCGCCAACAATACCGAAGCGGCAACTATTTCAGACAACGCCGCGCCACCGACTAAGCCACTCGACAGTGATTCGTTGCTGACACCTTATACTCCCATGCATACCAACTACGAAGACGATATTTCCTACAGCGACTGGTGA
Protein Sequence: MDTTEEDYSQDEENLDNEDEQSSQDSDKWSQRRSTRKRPRTYPNASKRKRRKRRLQPKDIKNEDESDAHVEDESTVEPAVLTDIEEDECIPNGCKSIECFICGCRLSRIYNLRIHMESHTEVDSYDKEAFENSEIFNILNPHKRNIDSNIIRNFIIQEIKAKRYSQFYCILNEAAVELHISDSETDSDSASDLIPRNNYRCELCKKNFDRRYKALFHQKTAHTKSEFAVECDYCMKKFVCMNLLIYHLKTQCESDEKPVPCTERFMKFLLKANLDHYASLAQAREQKKLRKMTEAPKQYVCNTCNKTFTRQEHLTRHSAVHLPDEMKFECPICDRRFNRKDNMRSHMKTHTEEGSRSAESQKILCSCCGRSFTSKSNYVVHMRRHTGEKPYKCDVCGKGFPKSTDLNSHKITHTGEKNFVCTICNKAFARSAVLSKHMRVHNGPYECTFCKKTFAKPSALTLHLRTHTGGRLCVCVACSKAFDTKTELDAHFALTGHDCESKPPISAQRCSVAEKAFKNAQVDPPAISISPEPPQANIDNHVKRNSDPLEINEYEWRTTKVKVPVNEAIQSVLQRSTGANNTEAATISDNAAPPTKPLDSDSLLTPYTPMHTNYEDDISYSDW

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00991988; iTF_00992003;
90% Identity: -
80% Identity: -