Basic Information

Insect: Eumerus sabulonum
Gene Symbol: -
Assembly: GCA_951905685.1
Location: OX645062.1:1493787-1495679[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 3.2e-06 0.00057 21.3 4.6 1 23 197 219 197 219 0.98

2 12 4.1e-05 0.0072 17.8 5.8 1 23 226 248 226 248 0.97

3 12 1.4e-05 0.0025 19.3 1.6 1 23 266 288 266 288 0.98

4 12 4.9e-05 0.0086 17.6 1.6 1 23 298 320 298 320 0.98

5 12 4.6e-06 0.00082 20.8 0.7 2 23 327 348 326 348 0.97

6 12 2.6 4.6e+02 2.7 0.1 14 23 387 396 382 396 0.85

7 12 2.4e-07 4.2e-05 24.9 0.3 1 23 402 424 402 424 0.95

8 12 0.00031 0.054 15.1 2.0 1 23 430 452 430 452 0.99

9 12 2.3e-05 0.004 18.6 1.4 1 23 458 480 458 480 0.98

10 12 0.0045 0.8 11.4 8.2 1 23 486 508 486 508 0.99

11 12 4e-06 0.0007 21.0 1.3 1 23 514 536 514 536 0.98

12 12 3.7e-05 0.0066 18.0 0.4 1 23 542 564 542 564 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	3.2e-06	0.00057	21.3	4.6	1	23	197	219	197	219	0.98
2	12	4.1e-05	0.0072	17.8	5.8	1	23	226	248	226	248	0.97
3	12	1.4e-05	0.0025	19.3	1.6	1	23	266	288	266	288	0.98
4	12	4.9e-05	0.0086	17.6	1.6	1	23	298	320	298	320	0.98
5	12	4.6e-06	0.00082	20.8	0.7	2	23	327	348	326	348	0.97
6	12	2.6	4.6e+02	2.7	0.1	14	23	387	396	382	396	0.85
7	12	2.4e-07	4.2e-05	24.9	0.3	1	23	402	424	402	424	0.95
8	12	0.00031	0.054	15.1	2.0	1	23	430	452	430	452	0.99
9	12	2.3e-05	0.004	18.6	1.4	1	23	458	480	458	480	0.98
10	12	0.0045	0.8	11.4	8.2	1	23	486	508	486	508	0.99
11	12	4e-06	0.0007	21.0	1.3	1	23	514	536	514	536	0.98
12	12	3.7e-05	0.0066	18.0	0.4	1	23	542	564	542	564	0.95

Sequence Information

Coding Sequence: ATGGAGTTGGATAGAAACAATTTCGACAAAATATGTCGCGCTTGCATAAAAATGGAAAAGGGACCACTCCAGCAGATATTCAATACGAATGTTGAAGTGTCCGACAAATGTAGCATAGCCGAGGTCTTAACTGCCGTTTCAATGCTTCAATTTGAGCCAAACGATGTTCTCCCCAAAGGGATATGCCCCGATTGCGTTGAAGCTTTGTTAAAAGCGTACAATTTCCAGAAGATGTGCATAAACTCAGACCAATCGCTGCGaaatatcgttctttgcgatgaaaAAACCAGTAATGTCCTCGTGGGGCATACTGCTGAAGCCACTTTGAAGGCGGAAGTTACCGCGAATGGTTGTCATACTCAACATAACTTATCTCCGAATTTGGAAGCGATTCTTGACCCTACTCCTACTGACAATCATGCCATTACTGTGAAGAACGAATGTGACGATGAGGCGGATCAGTATTCAGACAATAGTTCAGGAGAGAACAGATGTGATGGTGAACATCAGAACGAAGTGGACTCGTTCGACAACACTACAAGTACCGAAATTGAAAGACCGAATCCACGCAATCGTCGTAGTGCCTGCCATACCTGTGATACCTGCGGCAAATCATTCGACCGTCAACATCGTCTTCTGCGACATATGAACGTGCACAAAGCCGATGGACGACCTCATGAGTGCGAGCACTGTAAACGTCGTTTCACCAAAGCTGCACATCTTCAACGTCATGCCATAACCCACGAAAAGAATTTCCAAGAAAAAACAGAGCTAAGCAAGCAAAGCCCAGACGGCCACAAGTGTCCCGAGTGTCCGCGAAAATTCCTTAAACAGGAATCACTCGCCTCCCATATGCGCACACACCGTCGGGAAAAAAATGCCACGAAGAGCTATCAGTGTGAGATTTGCTTAAAAGTCTTCGAACGGCTATACCGGCTAACGCGGCACAAAAAACTACATGAGGAAAATCGCAAGTTGAGCTGCGATATTTGCGGGAAAACCTTCGGCCTAAGTTCACATCTCATCGATCATCTAAACAAGCATAGCGGAATCAAGCCACACGTGTGTCATTTCTGTGATAAATGTTGGTATCTCATCGAGGGTGATTGTTTGCCGGTTTTAAATCAATTCCTCATCTTTACAGCGTTCCTTCAAGCCTGCACTCTGAAGGATCATCTGCGTACACATACTGGTGAGCAGCCATTCCTCTGTGCGGAATGTGGTAAGGCTTTCAACAATGCCAGCAATCTGCGTCAACATCAATTGCGACATTCCGGTATCAAACGATATCAGTGCCCCGAGTGCCCTAGTAAATTCACATGTAAAAGCGGTTTATCATCTCACATGAGCACGCATCGCAACCAGAAACCGTTTGTCTGCGATACCTGCGGTTCACGGTTTACAAAACTCTACTCGCTAAAGAAGCACGAACGGATACATACGGGCGAAAAGCCCTACAAGTGTGACTATTGCGAAATGAGGTTCAACTGCTCGGATCATATGAAACGTCACCGGCGAACGCACACGGGAGAGAAGCCGTACGCTTGTAAATATTGTACTAGGACCTTTGCACAGTCCAACGACATGATAAAGCACCTGAGATCGCATGTCGGCGAGAATGTGTACAAGTGCGAGCAATGCGATGCGTCCTTCCGACTGAGTACGGAGCTGAAGAGGCACGTTGCCGACCATTACAAAGTCGAGAAGGCGCAAGTTGGAGTTGATCATAGATAG
Protein Sequence: MELDRNNFDKICRACIKMEKGPLQQIFNTNVEVSDKCSIAEVLTAVSMLQFEPNDVLPKGICPDCVEALLKAYNFQKMCINSDQSLRNIVLCDEKTSNVLVGHTAEATLKAEVTANGCHTQHNLSPNLEAILDPTPTDNHAITVKNECDDEADQYSDNSSGENRCDGEHQNEVDSFDNTTSTEIERPNPRNRRSACHTCDTCGKSFDRQHRLLRHMNVHKADGRPHECEHCKRRFTKAAHLQRHAITHEKNFQEKTELSKQSPDGHKCPECPRKFLKQESLASHMRTHRREKNATKSYQCEICLKVFERLYRLTRHKKLHEENRKLSCDICGKTFGLSSHLIDHLNKHSGIKPHVCHFCDKCWYLIEGDCLPVLNQFLIFTAFLQACTLKDHLRTHTGEQPFLCAECGKAFNNASNLRQHQLRHSGIKRYQCPECPSKFTCKSGLSSHMSTHRNQKPFVCDTCGSRFTKLYSLKKHERIHTGEKPYKCDYCEMRFNCSDHMKRHRRTHTGEKPYACKYCTRTFAQSNDMIKHLRSHVGENVYKCEQCDASFRLSTELKRHVADHYKVEKAQVGVDHR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -