Esab033132.1
Basic Information
- Insect
- Eumerus sabulonum
- Gene Symbol
- -
- Assembly
- GCA_951905685.1
- Location
- OX645064.1:21448709-21452045[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 17 4.3 7.7e+02 2.0 4.3 3 23 179 200 178 201 0.95 2 17 0.13 24 6.8 1.7 6 23 209 226 209 226 0.95 3 17 6.2e-05 0.011 17.3 2.5 1 23 232 254 232 254 0.99 4 17 0.00055 0.097 14.3 3.2 1 23 259 281 259 281 0.97 5 17 0.51 90 4.9 0.7 3 23 288 306 287 306 0.75 6 17 2.2e-05 0.004 18.7 0.5 2 23 315 337 314 337 0.96 7 17 0.00016 0.029 16.0 0.6 1 23 344 367 344 367 0.95 8 17 0.00023 0.041 15.5 0.5 1 20 373 392 373 395 0.94 9 17 0.01 1.9 10.3 0.7 2 23 665 687 664 687 0.96 10 17 9.1 1.6e+03 1.0 0.8 6 23 696 713 694 713 0.96 11 17 3.8e-06 0.00068 21.1 1.8 1 23 719 741 719 741 0.99 12 17 2.4e-05 0.0043 18.5 1.5 1 23 749 771 749 771 0.99 13 17 0.00017 0.029 15.9 0.5 2 23 778 800 777 800 0.88 14 17 1.9e-05 0.0034 18.9 0.4 3 23 808 828 806 828 0.95 15 17 0.00012 0.021 16.4 0.2 2 23 837 859 836 859 0.95 16 17 0.00021 0.038 15.6 0.1 1 23 866 889 866 889 0.94 17 17 0.0017 0.31 12.7 0.1 1 17 895 911 895 912 0.91
Sequence Information
- Coding Sequence
- ATGCAGTGCATTCTGTGCACAAAACAATCCGCAGGGTTCTTGTGCATATTTGACGACACCGGACTGCGTCTGGACATCGACTATGTCATAAGAAAACACTTTTGGTTGAAGCCGGAGGTAGATGACCCGAAAACCAGTGCCGTGTGCTGCACCTGTTGGGATGCCGTCAACGCGTTCCATAAATTCTATCTGCTGATCGAAGAAGCTCATGCTAAACTGACCAGCGTGATACTTTCAGTGGACAATAGTGCAATTGATTTACAATGTGATCATCTTGCTCCAGTCATCGGTACTCGTGGCGCCAAAAAGGAATTGCAAGAAACCGATAGGGAATCTAAATCGAAAAAATCAAACAGATCGGATTCTGAATCGGAAATCCCTCTCCTGGCGTTAAGAAGGCGAAGAAAACCAGTAGGCCACCACAAAAACCTCTCCACACAACGTCAAGAAACGGATAAGACCACCAAAAGCAATGAGAAGCAAATTTCCTGCCGCGATTTCGACGACATCATCAAACAGAACATCAATCTCTTGTGCAATATTTGCCACGTACAATTGACCAGTTTCTTTGCGCTCAAAGAGCACTACCATTCCGTGCACCACCAAATCGGCTACGTCATCTGCTGCGACAAGAAATTCCAGAGCCGTCACGCGTTAGCACACCATATCGTGCTGCACCAAAACCCAGACAGTTTCAAATGCAACACATGCAACAAGGTCCTAGCGAACAGGAAAAGCTATCGAAATCACCTAAACACACATGTGGAACGTGTCCATCGGTGCGATAAATGCAGCAAAGGCTTCGCGAAGAAAGAGAGGCTAGAACGTCACAAGCAGGTGCACGTAAAACCGGAAAGGATTTGCGAGCAGTGCGGCAAGGTCACCCGGAATTTGAATCAACACCAATTCCGGGAGCACTCCAAGGAGCCTCGAAAACGAATACAATGCCAAAAGTGTGGCACATCCCTGGCAGACAGTTCCAGTCTGAACACGCACATGAAGTACCAGCATCCGGCGAAGGAAACATTGCACGTTTGTAGCATTTGTGGCAAGATATCATCGACGGGATATGGTCTGAAGCGGCATATTCAGTACATGCACAAATCGGAACGGCGGCACAAGTGTCCGATGTGTGAGAAGGCCTTCAAGCTGGCACAGAACCTAAGGATTCATTTACCAAACCATTCTGGCATCACTGTTTATTGGTGCATCAAAGCACCATTAGGTGGCGCCACTTACGCTCGAAGAAAAGTCAAACTCAGACTAAACAAAAAAGTTCCAAATGTCGATGATTCGGACACGAGTGTCATATGCATATCCTGTTGGACggcattggactcgttccataAGTTTTACTTGCAAGTGGAGGAAGCGCACGAGAAACTGTTAAAGGCAAAAGCGATCGTTGATAGCGACGATCTTAAACTAGAGAGCGAGACTGGTCAGCAGCATAATAGTGTCTTTGAGGTGGAGCCAGAGTTACTGAATGCAGACATCAAATTGGAAGTGCAAGAAGATTTGGACGTAATACTACCACCCGACATCGACAAGGAATCCACATTCGACCCGGTTCAAAACGATTCCACAGACTGCAAGAAATCCATCGACAGCAAAACGCCCGCATCTCAAAACTCCACCCGCACAACACGAAGCCGAACTTCGACTGAGAAATCGTACAACGACTATTCAACAGACAATGACGACAAGGACAGCGATGACAATCGACGGCCCAGCTCTTCGATCGATTGGCAAGAACAAAActccgacgacgatgatgatgatgatgacagtGACTACGAGGATGGTACCTCAAAAGCGAAggcaaaaacaaaatcacaacCAGAACAGTCTTCAATCGGTGGAAAGAAACGCGGTCGCCCCAGAAAGGGAGACTCGTCGTCACACAAACGAAAGCGAAATTCGGAGAGTCAGTCGACGAAAATGGAACGCGTACGGGAATACGACGAGATCATAGCGAAAAACGTGAAACTCTCCTGCACCAAGTGCTCGATCGAGATCACCAATTTCGCTACTCTCAAACGCCACTATCGTTCGGTGCACAACGAATGCGGTTACGCAACTTGCTGCAGCAAAAAGTTCCTTAAACGTGGCATGTTGGTCGACCATATCTACACCCACTTGAATCCCGAGTATTTTAAGTGCGAGAAATGTGGTAAAGTGCTCGCGAGCAGGAAGAATCTCGACCACCATATGCTGACGCACGACACACAGAAGCAACGACTCTATCAGTGCGACCAATGCACATTGAGCTTCTTCACTCGACCACTGCTTACGCGACACTTGCAGACACATATCTCCGAACGCAACATCAAATGCCCCGATTGTGGTAAATTCTTCTCCACGCAGGATATCCTGCGGACGCATTTCTACAATGTTCACAATGCAGCCTACACGACGATCTGCGATCAGTGTGGGAAGTTATTTCGCCGGCCGGATGCATTCCGTCGTCATCAGCTGGAGCATGACGGTATTATGCAACCATTGGTTCCGTGCGAGAAGTGCGGCGTGAAACTAACGAGCAAGTATGGACTGAAGCGACACATGGAATCGATGCATCCCGAGACGGAAGTCACGCATGTGTGTAATACGTGCGGGAAAGTTGCACCAAGTGCGGCGGCATTACAGAGGCATATATCGTATATGCACAAAATGGAAAGGAAGTACAAGTGTCCGATGTGCGATAAGGCTTTCAAGAAGACCGGTGCGCTTAAGGTATGTATACCTTAG
- Protein Sequence
- MQCILCTKQSAGFLCIFDDTGLRLDIDYVIRKHFWLKPEVDDPKTSAVCCTCWDAVNAFHKFYLLIEEAHAKLTSVILSVDNSAIDLQCDHLAPVIGTRGAKKELQETDRESKSKKSNRSDSESEIPLLALRRRRKPVGHHKNLSTQRQETDKTTKSNEKQISCRDFDDIIKQNINLLCNICHVQLTSFFALKEHYHSVHHQIGYVICCDKKFQSRHALAHHIVLHQNPDSFKCNTCNKVLANRKSYRNHLNTHVERVHRCDKCSKGFAKKERLERHKQVHVKPERICEQCGKVTRNLNQHQFREHSKEPRKRIQCQKCGTSLADSSSLNTHMKYQHPAKETLHVCSICGKISSTGYGLKRHIQYMHKSERRHKCPMCEKAFKLAQNLRIHLPNHSGITVYWCIKAPLGGATYARRKVKLRLNKKVPNVDDSDTSVICISCWTALDSFHKFYLQVEEAHEKLLKAKAIVDSDDLKLESETGQQHNSVFEVEPELLNADIKLEVQEDLDVILPPDIDKESTFDPVQNDSTDCKKSIDSKTPASQNSTRTTRSRTSTEKSYNDYSTDNDDKDSDDNRRPSSSIDWQEQNSDDDDDDDDSDYEDGTSKAKAKTKSQPEQSSIGGKKRGRPRKGDSSSHKRKRNSESQSTKMERVREYDEIIAKNVKLSCTKCSIEITNFATLKRHYRSVHNECGYATCCSKKFLKRGMLVDHIYTHLNPEYFKCEKCGKVLASRKNLDHHMLTHDTQKQRLYQCDQCTLSFFTRPLLTRHLQTHISERNIKCPDCGKFFSTQDILRTHFYNVHNAAYTTICDQCGKLFRRPDAFRRHQLEHDGIMQPLVPCEKCGVKLTSKYGLKRHMESMHPETEVTHVCNTCGKVAPSAAALQRHISYMHKMERKYKCPMCDKAFKKTGALKVCIP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -