Basic Information

Gene Symbol
ncor1
Assembly
GCA_951905685.1
Location
OX645062.1:72554731-72574868[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 4.9e-08 0.00011 23.4 0.0 3 43 702 742 701 744 0.97

Sequence Information

Coding Sequence
ATGATGCCACCGCAATATAGGATAATCACCATGAACACACATTTCTTTACGGACAAGTATGCAACAttagttagGCCGGTCGATACGCCGCAATCGTACTCCAAGGGTGGCATTGTACAGCCGCCCGCACAGCAGCAACAGCCTCAATCCCGTTCGGCAACTAGTCCCCTTTCACCGCCACGTCCAGGACCGGGCGCTGCAGCTACCACCTTTCCGAAATTCGATGTTAATGCTGTTCGCGAAGCACCGCACCGTTACATACAGCAAAGCTCGTATAGTATCGGGCCTGTGGCGCAATATCGCGAAAGTCCCTACACTCGAATACCTCAAATGCCGCCAGCCCAAGTCCAAGAGTATCATCGTGCCGCTGCCGCAGCAGTTGCCTCATCACCCGTTGTCGTGTCCACCAACAATAGCCTACCCACAATTGTATCTGGCGTACCCACCGCCAATACGATGGACGTTACGCCGGTTCAATTCTCGCATGCACCGTCCGGTCAGTTGCTTGCCAGTGTTGGTGTAGCCGGAGGTCCGGGCGGCGGACCAGCGGGTAATATGTTAACTGTTGGACGACAGCGTATACCAGGCGTAATGTTGGCACATCAACAACAATCAGCTGCCGTACCATATGCAACAAGTGAATATATTGCGCACGttcgacaacaacaacagccaacGCAACAAGCACCGCCCGATCCCGGAGGACAACCGTACAAGAAGATGAGACTTAGCGAATCAAATCACCTGCCATCTGTAGTTACAAGCATGAACGCTGCTTCTCAACAAAACATACAAACGCAACCGCCTCATCCGCATTCACAACAACAGGCATCGATGCAACCTCCcccacagcagcagcagcagcaacaacaacagcaaccagTACCCCAACAATCACAGCATCCTTCCCAACAGGCATTACAACAATCCCAAttgcaacagcagcaacatcaacaacatcaacaacaacttcaccaacaacagcagcagcaacaacaacaacaacagcagcaacaacaacaacagcagcaacaacaacagcagcagcagcagcagcaatccACATCGTCCCTCATAGTCAATCGTAGCTCGCACCTAATACAGTCGCATACGCAATCACCATCAGGACCTCCCCTCCCGCCAAATAACATGAGCAACAATAGTGGCGTACCAAATAGTGGTCACCAGCCGGCGATAATCAATATTCCAGCGACGCAACAACTAAAAATCGAGACGCGCGATCATCAACGGCCCCCGCAGACGACTGAAGCCTATCATCCCCAAGTAGAGGCGATCTCCCCCACACTGCCAAATGACACCGCCGAAGAGCGTCGTACTACCGCCAAGGAAGATCTTCTCATGCAAATCCAGAAGGTCGATCAAGAGATCGTTAATGCCGAGAATGCCTTGAGTGCTCTGcagaaaaaagtcgaaatactACAGGAAGCCTCAAGTAAACCGAAGAAAGCGAAGGAAGAGCAGTTGTTGCAGCCGAAACGACGCCATCAAAGTTTGGTACAAAAGATCTACGAGGAAAATCGTAAGATTGCCGCCTCCCGACATTCCATTCTGAGTGCGTTAGGTCCGCCAATCGAGCTGCCACTATACAATCAACCATCCGATGTGGAGCCATGCGCCGAAGTGATCAAACGTTACAATGCCACAATGAAAACGCATCTGTTGCAGCATTTAAAGAAATTCAAACACGATCGATACGTTCGGAATACGGCGCTGGTCGAGAAATACGCGCAAGCGTCACAGGAATGGCTTAAGCGGGTTGAAAAGTCTGAATCGAGCGCTAAGCGAAAAGCCCGCGAAGCGAAAAATCGCGAATTCTTCGAGAAAGTATTCACGGAGCTGCGCAAACAACGGGAGGATAAGGAACGATTTAATCGTGTCGGTTCGCGGATCAAATCCGAAGCCGATCTCGAAGAGATTATGGACGGTCTACAGGAGCAGGCTCTGGAAGATAAGAAAATGCGATCCTATGCTGTGATACCACCACTCATGTACGATACGAAGCAGCGACGTTGCATCTATCACAACGAGAACGGTGCACTGGACGACATGGTGGCGGACTATAAAGACCGTCAGAACATCAATGTGTGGACAGCAGGCGAGAAGGAGATTTTCAAAGAGAAATTCCTACAGCATCCGAAGAATTTTGGTGCAATAGCAGCTAGCCTGGATCGAAAGTCGCCGCAAGATTGTGTTCGCTACTACTACCTCAGTAAAAAAACGGAAAATTACAAACAATTGCTGCGAAAGTCGCGACAGCGAACGCGAAGCTCTCGGAATCCGCAAAAATCACAACAAGCGCAGACACAATGCATTATAGATTCAATGACGACGGGAGTGACAACGCGATTGCAACGTGAACAGCAGCAAAAGACTGGCGGTCGAGATCGTTCGTCAGCCGCACATTTGTCGCATAACACATCGGCGTCATCATCTGCCACCGCTGCGTCCAATTCGACTGCATCTGCAACAACATCCACGACGACATCAACAATAGCAGCCTCATCAACGGCCGTGACGACATCCTCGTCGACAGGCAATGCCGTTTCCTCATCGAAATCGTCTGGTTCTGCGATAACAGCAACCATAAAGTCTCCATTATCGTCTTCGTCATCATCGTCAACGTccagtggtggtggtggtaaaTCGACAACAAACGATTCGTCATTTGTCGcttcagcaacagcaacaacatctGCAGCATCGGTGTTGAGCAGCACATCGGCAACATCATCATCTACCACCACTTCCACTTTGTCATCGTCGACAACAGCCAGTACAAGTACTGCAACAACGATTGTTTCATCCACAACATCGTCGTCAACAATTACAGAGTCCACGACGGTGGCCACAAATGCCGACTTGTCCTCCTCGTCGTCCTCCTCTGTGGATCGTAAATCACCGTCGACGACAGCGGCTGCGGCAGTTTCGAATTCGACTTCTGGCAAAGAGAATAAATCTGAAAATGGCGCCGCCTCTGGTCTATCTAGTTCAGAAACCAACGGACCCAAGACGGCAACCATGGCCGATGCGACTGGTGAGAAACCGATTTCCACCACAAGTTCCACAGATACCAAGAGTAGCGAGGACAGAAACAGCAACTCTCCAAAGGTGGAAAAGGATTCGGCTGCGTCGATGCCACCAAAATCTGTGACACCCAGTGCAGCCGGAAACGGAAGTGCCAAGGGATTGGATGAAAATAACGCACCACtattgcaacaaggtaatgctgGTGTTTTGAATTCAAATTCCAACACACATCCTATTGGCACACCGAACGGCATCAAGTCGTCATATGCCGCGGTGTATGCCTCCTCTATGAATGCAAGTGGTATAGGAAGTGACGCAAAGTCGGGAGCGACAGTTATCGGTGGGAGTGAGAGCGAGGGAGCTGCAAAGAAATTGGCAGAAGGTGGTGTTGGTGGTGGCAATAGTGTTCTTCTGCTAGCTGGACAAAAAACGAAAGCAACCGACACCGACGGTGGCAGTGATAATAACTCGAATGTTAGCCGGGCATGGTTCCGGGCAACAAATCAGGTGGGAGTTGTTTGTGCTTAG
Protein Sequence
MMPPQYRIITMNTHFFTDKYATLVRPVDTPQSYSKGGIVQPPAQQQQPQSRSATSPLSPPRPGPGAAATTFPKFDVNAVREAPHRYIQQSSYSIGPVAQYRESPYTRIPQMPPAQVQEYHRAAAAAVASSPVVVSTNNSLPTIVSGVPTANTMDVTPVQFSHAPSGQLLASVGVAGGPGGGPAGNMLTVGRQRIPGVMLAHQQQSAAVPYATSEYIAHVRQQQQPTQQAPPDPGGQPYKKMRLSESNHLPSVVTSMNAASQQNIQTQPPHPHSQQQASMQPPPQQQQQQQQQQPVPQQSQHPSQQALQQSQLQQQQHQQHQQQLHQQQQQQQQQQQQQQQQQQQQQQQQQQQQSTSSLIVNRSSHLIQSHTQSPSGPPLPPNNMSNNSGVPNSGHQPAIINIPATQQLKIETRDHQRPPQTTEAYHPQVEAISPTLPNDTAEERRTTAKEDLLMQIQKVDQEIVNAENALSALQKKVEILQEASSKPKKAKEEQLLQPKRRHQSLVQKIYEENRKIAASRHSILSALGPPIELPLYNQPSDVEPCAEVIKRYNATMKTHLLQHLKKFKHDRYVRNTALVEKYAQASQEWLKRVEKSESSAKRKAREAKNREFFEKVFTELRKQREDKERFNRVGSRIKSEADLEEIMDGLQEQALEDKKMRSYAVIPPLMYDTKQRRCIYHNENGALDDMVADYKDRQNINVWTAGEKEIFKEKFLQHPKNFGAIAASLDRKSPQDCVRYYYLSKKTENYKQLLRKSRQRTRSSRNPQKSQQAQTQCIIDSMTTGVTTRLQREQQQKTGGRDRSSAAHLSHNTSASSSATAASNSTASATTSTTTSTIAASSTAVTTSSSTGNAVSSSKSSGSAITATIKSPLSSSSSSSTSSGGGGKSTTNDSSFVASATATTSAASVLSSTSATSSSTTTSTLSSSTTASTSTATTIVSSTTSSSTITESTTVATNADLSSSSSSSVDRKSPSTTAAAAVSNSTSGKENKSENGAASGLSSSETNGPKTATMADATGEKPISTTSSTDTKSSEDRNSNSPKVEKDSAASMPPKSVTPSAAGNGSAKGLDENNAPLLQQGNAGVLNSNSNTHPIGTPNGIKSSYAAVYASSMNASGIGSDAKSGATVIGGSESEGAAKKLAEGGVGGGNSVLLLAGQKTKATDTDGGSDNNSNVSRAWFRATNQVGVVCA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00991751;
90% Identity
-
80% Identity
-