Basic Information

Gene Symbol
hzg
Assembly
GCA_951905685.1
Location
OX645061.1:104915979-104929611[-]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.6e-09 7.2e-07 29.9 0.0 3 36 18 51 16 56 0.93

Sequence Information

Coding Sequence
ATGGCTTCAAATTCGAAGAAGTGCACAAAACAACGACAAACGTGGGCGAAGGATGCTATGATGAAAGCAATCACTGCCGTTAACCAAAAAGAGATGGGCTTTTTAAGGGCTGCAAGAACGTTTAATGTCCCAAGAACTACGTTGAGGCGTTTAGTGGCAAAAAAGGATCAGCCTTTGGAGGAAGTGGTTAGTGCCAAACTAGGCAGAAAACCCGTTTTTCCTCTAGAACTTGAGCAGTGCCTTGTAGGATATTGCATGCAAATGGAAGGGAAACTATTTGGTCTAACCAGGAATGACATAAGGTCTTTAGCATTCCAGCTTGCTATAAAAAACCAAATTCCAAATCCATTCTCGATTCTTAAGGAAGTTGCGGGAAGGGACTGGCTACGTTTCTTTCTGAAACGTCATCCATCGCTTTCGTTCCGTCAGCCGACTGGAACATCTTTAGCCCGTGCTTCTGGATTTTCAAAAGAAAACGTAGCAATTTTTTTTGACAATCTAGAAATGCTTATGACCAAGTACCATTTTACTCCTAACAATATCTATAATGTGGACGAGACGGGAATTTCAGTTGTCCCAGCCAAAATGCCAAAGGTGGTTCCTACAAATTTGATATTTGGTGATAATGAACAAATCATGGCAAAGAAAAAGGGAAGCTATCGCAAAATTGAATCCTCGTCATCAGAAAGTGAGGACGATTTCATTCCAGACGACGGTTCAGATCCAAGTCCTGATAGATGTAATGAGCCGGATGCAAAATGCATATATTGCGCTAGCCTGTTCTCTGATGATAAGCAAGGCGAAGCTTGGCCAATTCCAAATGCAGATTTTATAGTACCGGTAGAAATAGATGGAACCATTCACCAGGTGTATGTATTGAAACGACCGCATGTCGATGAATTCCTTCGAAAAATGGGGGAATTATATGAATGTGTACTGTTTACAGCATCACTAGCCAAATATGCAGATCCAGTTGCTGATCTGTTAGATAAATGGAATGTGTTTCGTGCAAGACTGTTTAGGGAATCATGCGTTTATTACAGGGGAAATTATATTAAGGATCTTAACCGACTAGGTCGTGATTTACAAAAAATTGTAATCGTCGACAATTCACCAGCTAGTTACATATTTCATCCGGATAATGCGGTTCCTGTGAAGtcgtggtttgacgacgtcaCCGATTGCGAACTGCTCGAGTTGATTCCCCTTTTCGAGAAACTAAGCAAAGTCGATTCTGTATATAGTGTTCTGTGCAATTCAAACAATCCACTAAACAGTCAtattcaacaacaacaacaacaacagcaaatcctCCAACAAACTCACCTAACACAATCCAACCATCAAATGCAAATGGTGCAACCGACATCTGCGACAACGTCCATCATTAcccaacaacaaccgcagcaaTCGACACCAATAATTCAatcccaacaacaacaacaacagcagcagcaacaacaacagcaacaaatcGGTAGTCCGCCCAATTTAAACGACATTAGTAACAAGACGTAA
Protein Sequence
MASNSKKCTKQRQTWAKDAMMKAITAVNQKEMGFLRAARTFNVPRTTLRRLVAKKDQPLEEVVSAKLGRKPVFPLELEQCLVGYCMQMEGKLFGLTRNDIRSLAFQLAIKNQIPNPFSILKEVAGRDWLRFFLKRHPSLSFRQPTGTSLARASGFSKENVAIFFDNLEMLMTKYHFTPNNIYNVDETGISVVPAKMPKVVPTNLIFGDNEQIMAKKKGSYRKIESSSSESEDDFIPDDGSDPSPDRCNEPDAKCIYCASLFSDDKQGEAWPIPNADFIVPVEIDGTIHQVYVLKRPHVDEFLRKMGELYECVLFTASLAKYADPVADLLDKWNVFRARLFRESCVYYRGNYIKDLNRLGRDLQKIVIVDNSPASYIFHPDNAVPVKSWFDDVTDCELLELIPLFEKLSKVDSVYSVLCNSNNPLNSHIQQQQQQQQILQQTHLTQSNHQMQMVQPTSATTSIITQQQPQQSTPIIQSQQQQQQQQQQQQQQIGSPPNLNDISNKT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-