Esab001852.1
Basic Information
- Insect
- Eumerus sabulonum
- Gene Symbol
- -
- Assembly
- GCA_951905685.1
- Location
- OX645060.1:26226125-26226655[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 9.7e-11 4.3e-08 33.9 0.0 1 38 16 54 16 57 0.92
Sequence Information
- Coding Sequence
- ATGGTGCGGACTTATAAACCAAAAAAGACAAGTAGACAAGCTGTGGATGAAGAATCCATGCAGTCAGCAATACAAGATGTTATGCAAGGAGTATTGTCATACAGAAAAGCTGCGGACAAGTACAATTTGAAATTGTCAACATTAGAAAGCCGAGTAAAAAAATGCAATAGCAATGATGCTGCAGGATCAAGCAACCGTAAATTTGACTCTAAATATACAAGTTTCCAAGTCTTTTCTATGGAAGAAGAAAAACTGCTAAATGATTATATTATCAAATGTTGTAAGATGCATTATGGACTTACGACGATCCAAGCAAGAAAGCTAGCATATGAGTATGCCAAATCTTTGAGTTTGAAATATCCAGCAAAGTGGGAAGAAAATAAGATGGCTGGGAAAGAATGGATGTATGGTTTTCGCAGAAGAAAACGGGAACTCAGTTTACGCAAACCCGAAAACACAAGCGTTGCCAGATCTTTAGCGTTTAACAAAACCTCGGTTACCGAGTTTTATACCAACTTGAAGACAGTGTAG
- Protein Sequence
- MVRTYKPKKTSRQAVDEESMQSAIQDVMQGVLSYRKAADKYNLKLSTLESRVKKCNSNDAAGSSNRKFDSKYTSFQVFSMEEEKLLNDYIIKCCKMHYGLTTIQARKLAYEYAKSLSLKYPAKWEENKMAGKEWMYGFRRRKRELSLRKPENTSVARSLAFNKTSVTEFYTNLKTV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01088265; iTF_01414890; iTF_00998543; iTF_00677527; iTF_00998521; iTF_01152027; iTF_01195198; iTF_00755484; iTF_01197663;
- 90% Identity
- -
- 80% Identity
- -