Esab001905.1
Basic Information
- Insect
- Eumerus sabulonum
- Gene Symbol
- -
- Assembly
- GCA_951905685.1
- Location
- OX645060.1:26630509-26632360[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5.8e-13 2.6e-10 41.0 0.2 4 41 18 55 16 57 0.92
Sequence Information
- Coding Sequence
- ATGCCACGAACTAGAAAGCGGATGACATCAAAGGCTAGTTGGGCGTCCGCTACTTTAGAGTCTGCAATAGAAACTATTCGAAACGAAGGTATATCAGTTAATAAAGCGGCAAAGCAATATCAAATACCTTATAGCACGCTGAAGAAACGGTACAGGTTAGCAACTAGTAATGATATTACTTACAATAGTGCTCCGTTGCTTGGTAGGAAACCTGTGTTTACTGGTGAACAGGAACAGATACTTGTTAACCATATACTTGATATGTCGAATATGTTTTATGGTTTAACAAGTATCCAACTACggAAAGATTGGTTGTACGGTTTCATGAACCGACACCCTGAGCTCAGTATTAGAAAGCCAGAAGCGACAAGTATTAACCGAATTCTGGGCTTTAATAAAACTGAAGTCACTCGTTTCTTTAACAATCTTGAATCCGTAATGACAAAATTTAGTTTTGAGCCACAAAACATATTTAATATGGACGAGACAGGGTTTTCTACAGTCCACGAGCCAGACAATATAATTGCTCTCAAAGGACAGAAGCGTGTTGGTGCAGCCACTTCATGGGAGAGGGGCAAAAATGTTACGGCAATTTGTGCTATGAGTGCTACAGGCATTTATGTGCCTCCATTATTCATTTTCCCTCGACAGAGACACTCTCCACAGCTGGAACGTGATGGGCCACCAGGAGCTGCATATACTTGTTCAAAAAATGGGTGGACTAATGAGCAAATATTCTTAACATGGCTTcaacatttcattaaatttacaAAGCCTACTGCAGAAAACCAGATTTTGCTTATTATGGACAATCATAATAGTCACGCTACATTAGAAGCATATGAGATAGCCAAAAAGAATTATATAACTATGTTGAGCATCCCTCCACATTCGTCAAATCGCTTACAACCCTTAGATGTGACCTTTTTTGGTCCACTTAAAACAGCTTACAGAAGGGAATGCGACATGTACATAAAATCGAGAAACATGATTAAAATAACTCCATACGAAATAGCTGGACTATTTAATAAAGCCTATTCGAAGATAGCATCTTTAGATAAGGGAATATCTGGCTTTAAAACAACCGGAATATTTCCTATGGACCCATCAGTTTTTTCAGATGAAGATTTTATTGCTCTTGGCCAGAATGAACATGATAATAACACAACTAACGATGGTAAAACTGTTGGACCTTCGGAAACAATAGCTACAATTACTTCACAATCAGTGACTTCCTCTCAAAGGTCACTACAAAGGTCCACTACTCCTCAACAACATATGAGCAACCAACCATCACAACAAGATGTGCAAAGGGATTCTCCACAGCCTTCTACAAGTTTTGTTGATATCTTAAATGTTTTAAGTCCTCACCCACAGATATTAACAAAATCAACAAAGAGCAACAGAAACAAGCAGCATTCAGAGGTTTTGACTAGCACCCCCATGAAGAGAGTTTTCGAGGAGAAGAGAGAGAAAAGGAATAAAAAAGACAATGAAAATAATAGACCGaagaaaatccaaaaaaagaaatttaagaATACTGAATTAAAGATTAAGAATAAATCATCTCAAAAAATCTTAAAGAGAGCTACTAGAAATTTGTTTCAGGATGATTTTGACTACTCAGAGGAGGAAACTAAATGCATGATATGTAACGATGTTAGCAAAAATGAAGAATTATGGTACCGTTGCAGAGCTTGTGGCAAATGGGCCCATTCTGAGTGTTCAGGCTGCGATGATCCTAAAGATTACGTTTGCATTTTTTGTTTAGAACCCTAA
- Protein Sequence
- MPRTRKRMTSKASWASATLESAIETIRNEGISVNKAAKQYQIPYSTLKKRYRLATSNDITYNSAPLLGRKPVFTGEQEQILVNHILDMSNMFYGLTSIQLRKDWLYGFMNRHPELSIRKPEATSINRILGFNKTEVTRFFNNLESVMTKFSFEPQNIFNMDETGFSTVHEPDNIIALKGQKRVGAATSWERGKNVTAICAMSATGIYVPPLFIFPRQRHSPQLERDGPPGAAYTCSKNGWTNEQIFLTWLQHFIKFTKPTAENQILLIMDNHNSHATLEAYEIAKKNYITMLSIPPHSSNRLQPLDVTFFGPLKTAYRRECDMYIKSRNMIKITPYEIAGLFNKAYSKIASLDKGISGFKTTGIFPMDPSVFSDEDFIALGQNEHDNNTTNDGKTVGPSETIATITSQSVTSSQRSLQRSTTPQQHMSNQPSQQDVQRDSPQPSTSFVDILNVLSPHPQILTKSTKSNRNKQHSEVLTSTPMKRVFEEKREKRNKKDNENNRPKKIQKKKFKNTELKIKNKSSQKILKRATRNLFQDDFDYSEEETKCMICNDVSKNEELWYRCRACGKWAHSECSGCDDPKDYVCIFCLEP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- iTF_00688530; iTF_00688529; iTF_00688531; iTF_00688532; iTF_00688533;
- 80% Identity
- -