Esab027105.1
Basic Information
- Insect
- Eumerus sabulonum
- Gene Symbol
- -
- Assembly
- GCA_951905685.1
- Location
- OX645062.1:106504007-106505385[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 2.7e-11 1.2e-08 35.6 0.1 4 39 122 158 119 163 0.89 2 3 0.67 3e+02 2.4 0.1 28 37 193 202 166 207 0.70 3 3 3.2e-08 1.4e-05 25.8 0.0 3 39 231 267 230 271 0.86
Sequence Information
- Coding Sequence
- ATGTCCGTTACCGGGGTGTTCCACCATCATCATGACATTGAAGAATTTAAAGTCGAACCCGCACTGCCAATTCCACCTGTTCAAACAATCCCCAACGACACATCATCGTCCGATCAATACATCATATTCGAACTAAAGACCGACATGGAACCCACATGCAGCTACGTCGTAAAACAGGTGATAAACCAATTGCCTACCGATGGCGATGTCAATAAGTTACCCGATGATTTAAACAACAGTCAGAACGATAATGGACGTCAGTTGAACACAACGCCAATTGTTATAAATGTCCAGATAGCTGGAGAAAGTGCCAAAGAGAAAGAGAAAAGGCTGCGAAAATCCAAGCGAGCCTTGAAGCAAAAGCGACTCGAACAAGCCGTCGAGGCTGTTGTTAACAATCAGTTGACAATAAGTAAAGCCGCCAGTATGTACCAAGTGACAAAGAGTACTCTATGGAAGGAGGTAAACAAGCATACGAACATCCGTAAGAAAAGAATCGACGAGGACCTGAATAAAGCCATTGCAGACCGCATATGTGCTGGTGAATCTCTATCATGCATTTCGCGGTCATTAAAGGTGCCCAAGTCTACTCTGCACTTACACAAAGTTCGACTGGCACGAAAGGGTCAGCTACCGGCGAATGTGAAGCTGAGACCAGCTCCGAATTCGGCAGAACACCTTGCTATGAAGGATCGTATTATTCAGGCATTTCGCGGTTGTCGTGTGAATGGGATGTCTATACGTTTTGCCGCCAAGTTTTTCTCAATACCCCCGTCGACGCTGTGGAAGCACATACATCGCTTTAGAGCTGCTCAAAAAGCTCAAGTAGCAGCAGCAACTAAAAGTGTTGCGGTGTCGTTGGGTAGAACCGAAACCATGCAAGACGAAGCGGAAGCAAATGAATCGTCTGACAGTGCTGGCGAGGAAAGTATAACAGAAGAGGAGGATCACGACGGGTTCAAAGAACAGATCACGGTTTCGAATAGTGACACAGATGACACAATGGCGACAAGCAGCGAGGACGGTGACTATCTGATTAGTTTTGATTTCGATGCCTTTGAGAAATATGTAAAAAGGGAATTACAGTAA
- Protein Sequence
- MSVTGVFHHHHDIEEFKVEPALPIPPVQTIPNDTSSSDQYIIFELKTDMEPTCSYVVKQVINQLPTDGDVNKLPDDLNNSQNDNGRQLNTTPIVINVQIAGESAKEKEKRLRKSKRALKQKRLEQAVEAVVNNQLTISKAASMYQVTKSTLWKEVNKHTNIRKKRIDEDLNKAIADRICAGESLSCISRSLKVPKSTLHLHKVRLARKGQLPANVKLRPAPNSAEHLAMKDRIIQAFRGCRVNGMSIRFAAKFFSIPPSTLWKHIHRFRAAQKAQVAAATKSVAVSLGRTETMQDEAEANESSDSAGEESITEEEDHDGFKEQITVSNSDTDDTMATSSEDGDYLISFDFDAFEKYVKRELQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -