Basic Information

Gene Symbol
ct
Assembly
GCA_951905685.1
Location
OX645062.1:596639-671713[+]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 1.7e-26 2.2e-22 80.0 0.0 3 71 786 855 784 861 0.94
2 3 7.7e-32 1e-27 97.0 0.0 3 77 1211 1286 1209 1288 0.96
3 3 1e-30 1.4e-26 93.4 0.0 3 77 1424 1499 1422 1501 0.96

Sequence Information

Coding Sequence
ATGCAGCCAACATTGCCACAAACAGCGGGGACAGCCGATATGGATTTGACGGCTGTTCAATCGATGGATTGGTTATTTAAAAAGGAGCGAATCTATCTATTGGCACAATTCTGGCAACAGAGGGCAACTTTGGCTGAGAAGGAAGTAAACACATTGAAGGAGCAACTGTCAACAGTTTCCATCGTTACAACATCAACATCTTCAACGATAACCACAACATCATCTTCGATACATTCGTCCCCACCATCTCCATCATCAGTGAGCACAACACCAACATCTACTCCTATACCAAATATTAAGTTGTCTTCGATCGAGAGTAATAATAGCAGTTTTAACAACAATTATAAATTAAATAGTGCTGCGATTTCACAGCATTTACATCAAAACGGGAATTTGTTAGCGGCGACGCCCTCACCATCTCCGCCGCTTTCGGAAAACGGCAATACACTAAACGGCTGCCTTAGTAGTTCGACAAAATTACTTTTCAATCATAATCAAATAATGGACACTAATACATCGAGTTCTACAGCCGATCTCCCCGTGGTAGCAAATACAACAACCGTCTCTCAGAGCAGTAGTATAACCGATGCTAGTAAACTTATTACCGCTATGACGGCCGAAATGAATCTCCACCAAGATTCGAGTGAATCGGCAGAGCAAGCAACCAATCAAATATCAAATAGGCCTCACAGTCCTCCCCACCTACCCGAAGGTGGAAATGGAAGCGAAACTACCCGaaacaataataacaataatagtaGCTGTAACAATAATAAGAATGCAGATAGTGGTAACAGTAGTAGTTGTAACAATAATTTAGCTGATGAATTGGCTGCCAAAGAAAAAGAGATTAAAGCACTTATCGATGAGGTAAACAGACTGCAAGCCCTCCAAGAATCCCACATTGTACAAATACAAAGACTCGAAACTAATCTAGAAGCAAAGCGCCAGCATATTTTAAGACTAGAAGCTCGTCTAGAAAAACAACAAGTTCAGAACAGTGATGCTGCATTAAAACAAAGTCCAGAAGTGATTAGGGATTGCGAAAAAATCGGACACTCCATAGCTTCGGAACAACAATCAATAGTATCGGATGATGTACATATTAAGAAGGAAAATCAAACAACAGCAACTCCAGTTCCGGTTGATGTTACAAGCCAGTCAGTAGTAGCGGTGGCAGCAGCAGCAGCTGTAGCTGCAGCTAATGACCCCAAGCAATTTCAGGAACTTTTAATTGAAAGAACAAAAGCATTGGCGGCTGCTACACAAGCCTCGAATGAGGCGGCAAAAGCTGAAGGATCCACCAGTGACACAACCTCAGGAGACACTTCCAAGGCTGCTGGTAATGAACATGCAACATGCGAAGTTCTCAATAGTGATCCACCAAATGATGCTTGTCTCCAAGAACAGCAGCAACAGGAGCTAAGATCACCAACTCAGCTAGCTGCACCTACACCCGTAGAACAGATTCCGTCATCTAATTTCCAAAGTGTTGACCAATTCGGTTCGTTACTTGGTGGTGAATTAGTTAATTCATATTGGCGCCGGGGTTTTGATCTGCCTGCCGACCTTAAGTTACCGTTGTCACATCACGTACCCTTAGCTCCACCGGTACTACCCCCCGCCCAACAGCAGATAACATCAACAAATATCACAGCTTCAATAGCACATCCGCAACAACCATCGTTATCAACAGTCACAACAAATCCAACCTCTAAAACGCCTACATCGATCTTTCAAAATTTTTCATCAATTCTTTCTGGCCGATCACCTCCGCCACTTTCGATGTCGGCATCGGGACCATCGACTACCACTTTATTGAGTCAACTAGTCAATACAACATTTTCATCAAATTCAACTCCTTCTCTTCGAACAGATCCTCATTCGTCGCTTTCATCATCTTCCACAACGACAACGGGCGCCCATTTGCAACAATCTACACACCATCACCACCATCACCATCCTTCTCTACAACAGCATCATCATCTTCAACAACACCAACACCAGGACTATGAAAAAGCCAGCAGTCATCACGATTCTTCGTCAACCGCGAGCACACCCAATCTACAAGACCAACGTTCCAACGATGAACATATGAACGGGTCCAAGTCCAGCAAGGCTCAGGAAGACAATAATAATTCACTGGGATCCTTAGCACATTTACCACCTGCATTCCTACCTGGCTTACCATTCCAATTCCAAGATCGTGGTCATTTTCGTTTCGCTGAAGATATCCAACTTCCGCCCGGTGCTTCCATGGCCGGCCGCCTCGGCGAGTCCCTCATACCGAAGGGAGATCCGATGGAGGCTAAGCTGCAGGAAATGCTACGGTATAATATGGACAAATATGCTAATCAAAGTTTAGATACATTAAGCATATCGCGTCGTGTTCGCGAACTACTTTCCGTACACAATATCGGACAGAGACTTTTTGCTAAATATATACTCGGCTTGTCACAAGGCACTGTTTCTGAGTTGCTTTCAAAACCGAAGCCCTGGGATAAACTGACTGAAAAAGGCCGTGACAGTTACCGTAAAATGCATGCCTGGGGATGTGATGATAACGCTGTGATGTTATTAAAGTCCTTAATACCCAAAAAAGATTCGAGTATGCCTCAGTACGGTCGAAATGAAGATTCGATGTCAGACGATCGTATTGCACATATTTTGAATGAGGCTTCTAGCCTTATGAAGACATCACAGGGACCAAGTTCACAACTGCAACATCAAATGCAACACGATGTACATCgacagcagcaacatcaacagCATTCTTCTTCACTTGAAGATTCTCACAGTAATGATGATTCAAAGTCACCACATACGCAATGTACATCACCTTTCTATAAGGAATCAGCGGCACCGCCGCTACAGCAACAACCGCCGCTACGGCAAGAGAATCAACGACGAAGTGCGAGCACGAAACCTGATGAGATATCACAAGATAAAATGGCACGAATATATCAGGAAGAACTGGCAAAACTCATGACACGCACGCCCCGCGATACATTTCCGAGTTTTTTGTTTCCACATTTTTTTAGTGCGGCTGGTGGTCTCCCGCCCGCCAATAGCGCAATACCACCTGACGATAATATTCGAATGGCTTTCGAAGCTTACCATAGAGAAATGGCTAAACTACAACAGGGTAACAGTAGTAATATATCCAGTTTTCCAAATTTTTCGAGCTTGATGGCTTTACAACAACAAGTGCTTAATGGCGCCCAAGATTTATCCGTCCCAAAAGAAAACGAATTAAAGACCAACGGGCAACGTAGTTCAATGGAAAGCTGCGATACAAACCAAACCAAAGAAATAAACGAGGAGACTGCATTGCGACACTCAAGTGCATTCAGTTTAGTACGCATAAAACCAGAGTCTTCGTCTATTCCGAATTCTAATTCGAATACCAATACTAATTCCGCTGCTCCAAGCCCTTTAAGTAATTCCATACTTCCGCCAGCAATGACGCCTACCGAAGATTTTTCAACGGCAGCCAGCCCTTTGCAACGTATGGCGTCGATCACAAATTCACTTATCACTCAACCGCCAGTCACGCCCCACCATACACCACCGCAAAGACCCACTAAAGCTGTTTTACCACCCATAACTCAACAACAATTCGACATGTTCAACAATCTGAACACGGAAGACATAGTTCGTCgagtaaaagaggctttgtctcaGTATTCTATAAGCCAAAGGTTATTTGGAGAATCAGTTCTAGGTCTGTCCCAGGGATCCGTCTCAGATTTGCTCGCCAGACCGAAACCATGGCATATGTTGACGCAAAAAGGTCGTGAACCCTTTATACGTATGAAAATGTTTTTAGAAGACGAAAATGCCGTACACAAACTTGTGGCTAGTCAGTATAAAATTGCCCCCGAAAAGCTTATGCGCACTGGCAGTTATAGTGGCAGCCCTCAAATACCACAAGGTCTTGCAAACAAAATGAGTAGCATTCCAATGCAAAAAATGATGAACGAACTAAAAATGCAAGAACCCCAAGCCCAGCATATTATGCAACAAATGCAAGCAGCATCTGCGATGGCTGCTGCGGCTGCTGCCAATCATATGCAAAATGCCCAACATCAGGGCATGTTATTAACCACGCCAGGGCTTCCACCACAACACACGATAAGCCTTCAGCAAGCCGCCAatgaaaaaaagacaatgatgaTGCCAATTCATTCGCCTCATCAGAATAATGCAATGCGCAGTAGCATGCACCAGCACATGTCTCCTACAGTATATGAAATGGCTGCGCTTACACAAGACTTGGACACTCAAGTAATTACTACAAAGATAAAAGAGGCTCTATTGGCAAATAATATTGGTCAGAAAATATTCGGCGAGGCCGTTTTGGGTCTCTCGCAAGGTTCGGTGTCCGAATTACTTTCGAAACCAAAGCCATGGCATATGTTAAGCATCAAAGGTCGCGAGCCATTTATTCGAATGCAATTATGGCTATCGGATGCAAATAATGTCGAGAGATTACAGGTACTTAAAAATGAACGACGGGAGGCTAGCAAACGACGACGATCTACGGGACCTAATCAACAGGACAATAGTTCGGACACAAGCAGTAATGATACCGCTGATTTTTACACGAGTAGTCCAGGACCTGGTTCAGTTGGATCTGTGGGAGCGCCCCCAAACAAGAAACAACGAGTACTTTTCTCCGAGGAACAAAAAGAGGCATTAAGATTAGCATTCGCCTTGGATCCGTATCCAAATGTCGGTACAATTGAATTTCTTGCCAATGAACTTGGTTTAGCGACGCGCACCATTACCAATTGGTTCCATAATCATAGAATGCGATTGAAGCAGCAAGTCCCACACGGACAACCCGCAGAACCTGTTCCTAGTCGTGAAAATACTAATACAACGCCCTTCGATCCCGTCCAATTCCGTATACTTCTTAATCAAAGACTGATGGAATTGCAGAAGGAACGTATGGGTTTAAGTGGCGCACCGATTCCATACCCACCGTACTTTGCCGCCAATCCCAATCTAGCAGCGCTAATTGGTCGTGGACTTTTACCAAGTGGAGGCGAACCGGATTTGCAAGCTCTAAATAATGCGTTTAAAGAGCAAATGAGTGGCCTAGATCTTTCCCTAAAACGAGAACGTGATGAGGACTTTGAAGACGATGGcgaaggtgatagtcacttatCCGACAATGAGTCCATTAATGGTAGTGATGAAAAATCAGATTTGAACGAAACACCTCGATCTTCCTTATCCAGAGCTGGTATGCAATCGAGAACTTCTAGACGTAAGCCCGCTGCTCCACAATGGGTTAATCCTGATTGGCAGGGGGATAATAAGTCTGGACTTATGCCTCCTATTCCAACCGCCACAACCGATAAGGAAGTAATTATTAATGGTGTTTGCGTAATGCAGCAGCAAGCAGCGGATTACAGTCGAAAATCTGCATCTGCTGAAGATGATGATGAAGCTGCATCTGATGCTAATGATGAGGGCCCATCTACTCAGCATCGAACACAATCACCTGATTGTGATGATCCTACCATTGACATTGATCAGCGGTTTATGGAACCCGAAGTACGAATAAAGCAGGAAGAGGATTGTGATAGCAATGACAGCCATCAAGACGATCATAATTCGAGCTTGAGAAAATCTTCGCATCAtggcgacgacgacgacgatactCCTGGCGCATGGAACTATTAA
Protein Sequence
MQPTLPQTAGTADMDLTAVQSMDWLFKKERIYLLAQFWQQRATLAEKEVNTLKEQLSTVSIVTTSTSSTITTTSSSIHSSPPSPSSVSTTPTSTPIPNIKLSSIESNNSSFNNNYKLNSAAISQHLHQNGNLLAATPSPSPPLSENGNTLNGCLSSSTKLLFNHNQIMDTNTSSSTADLPVVANTTTVSQSSSITDASKLITAMTAEMNLHQDSSESAEQATNQISNRPHSPPHLPEGGNGSETTRNNNNNNSSCNNNKNADSGNSSSCNNNLADELAAKEKEIKALIDEVNRLQALQESHIVQIQRLETNLEAKRQHILRLEARLEKQQVQNSDAALKQSPEVIRDCEKIGHSIASEQQSIVSDDVHIKKENQTTATPVPVDVTSQSVVAVAAAAAVAAANDPKQFQELLIERTKALAAATQASNEAAKAEGSTSDTTSGDTSKAAGNEHATCEVLNSDPPNDACLQEQQQQELRSPTQLAAPTPVEQIPSSNFQSVDQFGSLLGGELVNSYWRRGFDLPADLKLPLSHHVPLAPPVLPPAQQQITSTNITASIAHPQQPSLSTVTTNPTSKTPTSIFQNFSSILSGRSPPPLSMSASGPSTTTLLSQLVNTTFSSNSTPSLRTDPHSSLSSSSTTTTGAHLQQSTHHHHHHHPSLQQHHHLQQHQHQDYEKASSHHDSSSTASTPNLQDQRSNDEHMNGSKSSKAQEDNNNSLGSLAHLPPAFLPGLPFQFQDRGHFRFAEDIQLPPGASMAGRLGESLIPKGDPMEAKLQEMLRYNMDKYANQSLDTLSISRRVRELLSVHNIGQRLFAKYILGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWGCDDNAVMLLKSLIPKKDSSMPQYGRNEDSMSDDRIAHILNEASSLMKTSQGPSSQLQHQMQHDVHRQQQHQQHSSSLEDSHSNDDSKSPHTQCTSPFYKESAAPPLQQQPPLRQENQRRSASTKPDEISQDKMARIYQEELAKLMTRTPRDTFPSFLFPHFFSAAGGLPPANSAIPPDDNIRMAFEAYHREMAKLQQGNSSNISSFPNFSSLMALQQQVLNGAQDLSVPKENELKTNGQRSSMESCDTNQTKEINEETALRHSSAFSLVRIKPESSSIPNSNSNTNTNSAAPSPLSNSILPPAMTPTEDFSTAASPLQRMASITNSLITQPPVTPHHTPPQRPTKAVLPPITQQQFDMFNNLNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDENAVHKLVASQYKIAPEKLMRTGSYSGSPQIPQGLANKMSSIPMQKMMNELKMQEPQAQHIMQQMQAASAMAAAAAANHMQNAQHQGMLLTTPGLPPQHTISLQQAANEKKTMMMPIHSPHQNNAMRSSMHQHMSPTVYEMAALTQDLDTQVITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDANNVERLQVLKNERREASKRRRSTGPNQQDNSSDTSSNDTADFYTSSPGPGSVGSVGAPPNKKQRVLFSEEQKEALRLAFALDPYPNVGTIEFLANELGLATRTITNWFHNHRMRLKQQVPHGQPAEPVPSRENTNTTPFDPVQFRILLNQRLMELQKERMGLSGAPIPYPPYFAANPNLAALIGRGLLPSGGEPDLQALNNAFKEQMSGLDLSLKRERDEDFEDDGEGDSHLSDNESINGSDEKSDLNETPRSSLSRAGMQSRTSRRKPAAPQWVNPDWQGDNKSGLMPPIPTATTDKEVIINGVCVMQQQAADYSRKSASAEDDDEAASDANDEGPSTQHRTQSPDCDDPTIDIDQRFMEPEVRIKQEEDCDSNDSHQDDHNSSLRKSSHHGDDDDDTPGAWNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00976241;
80% Identity
iTF_00688500;