Basic Information

Gene Symbol
kn
Assembly
GCA_951905685.1
Location
OX645063.1:50822197-50939745[+]

Transcription Factor Domain

TF Family
COE
Domain
COE domain
PFAM
AnimalTFDB
TF Group
Helix-turn-helix
Description
This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 2.5e-70 1e-65 223.4 0.0 11 158 94 228 85 229 0.94
2 3 5.2e-141 2.1e-136 456.8 0.0 182 385 229 440 228 443 0.99
3 3 2.8e-11 1.1e-06 28.4 11.0 422 508 443 532 440 545 0.81

Sequence Information

Coding Sequence
ATGCATTTTCGGTATTCGGGTTTCGGGTTACGGGTTTCGGTTTTCGGGTACTCGGTTTCGCGATCTCGTGTGACAAGCAACAACAAGTGGAAGGAATCCAATAAGCTGCGATCCGACGAACCGGTGCCGGGCTTTAGCTCGGCTTCTCCATGGCCCACATTGGAATTGGAATGGGGACGCAAGCTCTATCCTACGACAGGGCCACGCTCTGCAAGCGGTTTGATGTTCGGCCTACCGCCAACCGGGGCCGATTTAAATCAACCCCGCGGTCCGATGACATCGCTAAAGGAAGAACCACTCGGAGCTCGAGCTTGGATGCAACCAGTCGATCAGACAAACCTTGGCATCGGTCGTGCCCATTTCGAGAAGCAGCCGCCAAGTAACCTGCGCAAATCAAACTTTTTCCACTTTGTCATTGCGTTATATGACCGGGCCGGGCAGCCGATCGAGATCGAACGAACGGCATTCATTGGTTTCATCGAGAAGGAGTCAGAATCGGATTCAACTAAAACCAATAATGGCATTCAATATCGATTGCAACTTCTCTACGCGAACGGTGCCCGACAGGAGCAGGATATTTTCGTGCGACTCATCGATTCGGTGACCAAGCAGgCAATTGTATACGAGGGGCAGGATAAGAATCCGGAAATGTGCCGAGTTCTACTAACTCACGAAGTCATGTGCAGGTTTTTCTTAAAGTTCTTTTTGAAATGTAACCAGAACTGCTTAAAGAATGCCGGAAATCCGAGGGATATGAGGCGATTTCAGGTTGTGATATCGACACAAGTGACGGTCGATGGGCCACTCTTAGCCATATCCGATAACATGTTTGTGCATAACAATTCGAAACATGGTCGTCGCGCTAAACGGATGGACGCCACGGAAGGACTCTATCCACCCCTACCGGTAGCAACACCCTGCATAAAGGCAATATCGCCCAGCGAAGGCTGGACTACTGGCGGAGCTACGGTCATCATTGTGGGCGACAATTTCTTCGACGGCCTTCAAGTTGTCTTTGGCACAATGTTGGTTTGGAGCGAGTTAATCACCTCTCATGCTATACGCGTGCAAACACCACCGCGACACATACCGGGTGTAGTCGAGGTGACACTCTCCTACAAGAGCAAACAATTCTGCAAAGGTTCACCGGGACGATTTGTTTATGTTtCAGCCCTCAATGAGCCGACGATAGATTATGGCTTCCAGCGCCTCCAGAAATTGATACCACGTCATCCGGGCGATCCGGAGAAGCTACAAAAAGAAATTATTCTCAAACGTGCCGCCGATTTGGTCGAAGCCCTCTACTCAATGCCGCGATCTCCCGGTGGTACGACTGGATTCAATTCATATGCTGGGCAACTGGCCGTCAGTGTTCAGGATGGAACTGGTCAATGGACCGAAGATGAATACCAGCGAGCACAGAGCAGTAGTGTCAGTCCACGTGGCGGCTACTGTAGTAGTGCATCGACGCCACACTCATCGGGTGGCTCCTACGGGGCTACTGCGAATGGCTATGGACCGGCACCGAACATGGGAGCGTTGTCATCATCGCCAGGCAGTGTATTCAATTCAACATCCATGTCGTCCCCGTGGCATCAGGCCCTTGTTcaacatcatcaccatcatcactcGCATCCGCATCCGCACCATCATCATTCGCATCATCCGCATCAGCCGTGGCATAATCCGACAACGGTATCAGCGGCAGCAGCTGtttaa
Protein Sequence
MHFRYSGFGLRVSVFGYSVSRSRVTSNNKWKESNKLRSDEPVPGFSSASPWPTLELEWGRKLYPTTGPRSASGLMFGLPPTGADLNQPRGPMTSLKEEPLGARAWMQPVDQTNLGIGRAHFEKQPPSNLRKSNFFHFVIALYDRAGQPIEIERTAFIGFIEKESESDSTKTNNGIQYRLQLLYANGARQEQDIFVRLIDSVTKQAIVYEGQDKNPEMCRVLLTHEVMCRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVISTQVTVDGPLLAISDNMFVHNNSKHGRRAKRMDATEGLYPPLPVATPCIKAISPSEGWTTGGATVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGSPGRFVYVSALNEPTIDYGFQRLQKLIPRHPGDPEKLQKEIILKRAADLVEALYSMPRSPGGTTGFNSYAGQLAVSVQDGTGQWTEDEYQRAQSSSVSPRGGYCSSASTPHSSGGSYGATANGYGPAPNMGALSSSPGSVFNSTSMSSPWHQALVQHHHHHHSHPHPHHHHSHHPHQPWHNPTTVSAAAAV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00251134;
90% Identity
iTF_00322206;
80% Identity
-