Eata020579.1
Basic Information
- Insect
- Eumaeus atala
- Gene Symbol
- -
- Assembly
- GCA_017140195.1
- Location
- JAOYMN010000222.1:2008-4910[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 0.00023 0.021 15.6 2.2 1 23 270 292 270 292 0.97 2 11 0.00081 0.072 13.9 0.9 1 23 422 445 422 445 0.96 3 11 0.00026 0.023 15.5 1.3 1 23 449 471 449 471 0.98 4 11 0.0019 0.16 12.8 0.4 2 23 493 515 492 515 0.94 5 11 0.16 14 6.7 5.9 1 23 519 542 519 542 0.97 6 11 0.045 4 8.4 0.4 2 23 565 587 564 587 0.91 7 11 2e-05 0.0018 19.0 3.7 1 23 597 619 597 620 0.96 8 11 0.00097 0.086 13.7 0.9 2 23 636 657 635 657 0.96 9 11 0.0038 0.33 11.8 1.0 1 23 663 685 663 685 0.95 10 11 0.37 33 5.6 2.4 1 22 691 712 691 715 0.90 11 11 0.0091 0.8 10.6 1.6 2 23 767 788 766 788 0.96
Sequence Information
- Coding Sequence
- ATGTCAACTACAGAAAATTATGAAGTTCAAGAAAGCGAAGCACAACATGTACCTGAACTGGATATAAAAAATGAAGAATGTGATTTGACAATACATATTAAACCTGAAAATTATGAGGATATAAATACAGCTAACGACGATGATGATAATCCATTTCAAAACATACAAGTCGAAATAAAACAGGAGGAGTTACAACAAACAAACAAACACTTTGAATCTAATATGAAGATGGAAATAATTCCAAAGCATATAAAGGAATTGTGTCATATATCAGAGACAAAAACTGATGAATTTGATATCAAAAGTGAAATAGAGTCGAGTGAGATGGTTGTGCCGGATGATTATCCCTCGCAAGACGAGGGAAGCATGGACAGTAATGAAGCAAGGGCACTTCACAACGTTGAAGCCTGTTTGCAAGATGACATTGATGGAAAAGTAGGAGATTATCAGGTTCACAACAATGCCATAGACAATGTTAAGGATGAAATGGGATATATGGTCACAGAGACTCATTTAATTTCAAATAAACTTATAAACACTACATCCACAGTAACAATACCATGCGAGGGTATGATTGAATCGGAAACCACTAAGACATTGATCATGGAAATACATCCTATGTTACACACGGCCACTACACTGCACAAAATTGGTACTCCTGAAGTTATACTACCCACAGCTTATCATGAAACAGGTTATGATGATTTCCAATTAAATTCAATCACGAGTAACATACTGCCGTTAGAACAAGAGGCTTATGGATTATTACAAGCTAAAAAGAAGAAATGTTTAAATAGGCCAACACAATATGCGTGTCCGAAGTGTACAAAATTATGTAACACCCCTTATACTCTGAAGAAACACTTGAGTGTTCACGACAGCATTGAAAGGCGAGCTTTAGGTGTTGTAAAAGGGTTGCAGACGAGAATAGAAAGAAAAAGCAAAAATTATTATGATAAAGTTAGCAAGGTGAAAGAGAAACAAAAGGAACAAAAAAACAAAATAACAACTCAACAAATACGAAGAGATCGTCTGGAAAAACGGTTACAAAGGATAAAGAGATCTGAAAGAAAAAAGTCCAATAGTGTAAAAACTACGAATACACCACAAGATAATATTAAAATAGAAATCGAAGTAAAGGGAGTTAAGAATGAAAATATTAAAAAGGAAGGCTACGTTTGCACTTGCGGGCAAGTGTTTCAACGTAAAAGCAGAATGGAGACATGTCTTCGGTCCCACGAAACATATACAGACAGTAATTGTTACGCTTGTATGTCATGTTCGAAGCAATTTAAAGACAAAGTAGAGCTGGCTTCGCATAGGAAGAGGCTACATCGAAAGCGTTTTCCATGCAAATTTTGTCCGACAGATTATAATACTAGAAAAGAACTTTTCAAACATCTCCAAATTCATCAGGAGGTTCAGCTGACGGAATACAAAGTTATATCTCAAGTTGTGATGGGAAAACAGAAGTTGAAGTGTTTCATGTGCAGAAAAGCTTATTCAGAGTTATCCGATTTGAAATCCCATGTAATGGAGGACCATAAACAGCCTTATATTTGTTCGCATTGCAAAGGAACTTTTTCGAAAATTATTGATTTCTGCAATCACACAAAGACCCGTCATCCAGAGGTGGAGGGTCAGCCAGTACTAGACGTACTAGAGGCCTTTTCTAAATTGGTCAAAGCGTGGAAATGCGAAGAATGTGAGCTGCAATTTCACGAGGCAGATAAACTTGCGAAACATCAAGTCGAACAGCACAGTCCTGAAATCAAAACCGAAGCACAGTTTCAGTGTCAGGACTGTCATAGAATGTTTGTCAGTCAAAAAGGGCTCACTTCCCATGCGAGAATACACCACAATATAGAACATAATGAGGATTTGGAGACAGCTGAGCAAGGGGTTATGTGTGTTGAATGCCGTAAAATATGCAAAGACATGGATGCTTTAACGTCGCATATGCGTCTACACTCTCCAGAAAGGAAATATCCGTGTAAATTTTGTGATTTCCGTTTCACAACACCGGAAAAAAGGAAAGCGCATTCAGAAATACATACTGGGGACATGAAATATGTATGTTTTATTTGCGAATACCAGTGCAGTTCAGAAAATAGGTTGCAGCAACACAAAATTTCTCTAAAACATGCTAACATGAAAGAGTTTCTTTTAACTGGCAAACCATTAATACAGGAAGATCCACCTACATCTTCGAAGAAACAATCATCCAGTAAAGACACGGAGGCTAAAAAAAGAAAGAAAGAAAAAGATAACTTGTCATCAGAGGATGAAGAAGAACTAATGTGCGATGTTTGTGGTGATAAATTCTCTAGTAAAAAGAAAATGTTAAAACACAAGAGCACACACCCATTTATAGAATTCCCTAATGAAGATACGCCTACTAGAATATTTTTTAAATAA
- Protein Sequence
- MSTTENYEVQESEAQHVPELDIKNEECDLTIHIKPENYEDINTANDDDDNPFQNIQVEIKQEELQQTNKHFESNMKMEIIPKHIKELCHISETKTDEFDIKSEIESSEMVVPDDYPSQDEGSMDSNEARALHNVEACLQDDIDGKVGDYQVHNNAIDNVKDEMGYMVTETHLISNKLINTTSTVTIPCEGMIESETTKTLIMEIHPMLHTATTLHKIGTPEVILPTAYHETGYDDFQLNSITSNILPLEQEAYGLLQAKKKKCLNRPTQYACPKCTKLCNTPYTLKKHLSVHDSIERRALGVVKGLQTRIERKSKNYYDKVSKVKEKQKEQKNKITTQQIRRDRLEKRLQRIKRSERKKSNSVKTTNTPQDNIKIEIEVKGVKNENIKKEGYVCTCGQVFQRKSRMETCLRSHETYTDSNCYACMSCSKQFKDKVELASHRKRLHRKRFPCKFCPTDYNTRKELFKHLQIHQEVQLTEYKVISQVVMGKQKLKCFMCRKAYSELSDLKSHVMEDHKQPYICSHCKGTFSKIIDFCNHTKTRHPEVEGQPVLDVLEAFSKLVKAWKCEECELQFHEADKLAKHQVEQHSPEIKTEAQFQCQDCHRMFVSQKGLTSHARIHHNIEHNEDLETAEQGVMCVECRKICKDMDALTSHMRLHSPERKYPCKFCDFRFTTPEKRKAHSEIHTGDMKYVCFICEYQCSSENRLQQHKISLKHANMKEFLLTGKPLIQEDPPTSSKKQSSSKDTEAKKRKKEKDNLSSEDEEELMCDVCGDKFSSKKKMLKHKSTHPFIEFPNEDTPTRIFFK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00262131;
- 90% Identity
- -
- 80% Identity
- -