Basic Information

Insect: Eumaeus atala
Gene Symbol: -
Assembly: GCA_017140195.1
Location: JAOYMN010048723.1:2791-7308[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.0028 0.25 12.2 1.1 3 23 31 51 30 51 0.98

2 14 5.1e-05 0.0045 17.7 1.4 1 23 89 112 89 112 0.98

3 14 0.002 0.17 12.7 0.6 1 23 114 136 114 136 0.97

4 14 0.23 20 6.2 0.0 1 23 171 193 171 193 0.94

5 14 0.13 11 7.0 0.5 2 19 223 240 222 242 0.92

6 14 0.0046 0.41 11.6 2.4 1 23 252 274 252 274 0.93

7 14 4.5e-05 0.0039 17.9 0.4 1 21 280 300 280 301 0.95

8 14 0.091 8 7.5 1.7 1 23 313 336 313 336 0.96

9 14 0.00048 0.042 14.7 0.7 2 23 342 365 341 365 0.95

10 14 0.23 21 6.2 1.4 3 23 372 392 372 392 0.97

11 14 0.002 0.18 12.7 0.8 1 23 397 419 397 419 0.96

12 14 0.0007 0.061 14.2 2.4 1 23 425 447 425 447 0.97

13 14 3.8e-05 0.0034 18.1 3.5 1 23 453 475 453 475 0.97

14 14 7.3e-05 0.0065 17.2 2.9 1 23 481 504 481 504 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.0028	0.25	12.2	1.1	3	23	31	51	30	51	0.98
2	14	5.1e-05	0.0045	17.7	1.4	1	23	89	112	89	112	0.98
3	14	0.002	0.17	12.7	0.6	1	23	114	136	114	136	0.97
4	14	0.23	20	6.2	0.0	1	23	171	193	171	193	0.94
5	14	0.13	11	7.0	0.5	2	19	223	240	222	242	0.92
6	14	0.0046	0.41	11.6	2.4	1	23	252	274	252	274	0.93
7	14	4.5e-05	0.0039	17.9	0.4	1	21	280	300	280	301	0.95
8	14	0.091	8	7.5	1.7	1	23	313	336	313	336	0.96
9	14	0.00048	0.042	14.7	0.7	2	23	342	365	341	365	0.95
10	14	0.23	21	6.2	1.4	3	23	372	392	372	392	0.97
11	14	0.002	0.18	12.7	0.8	1	23	397	419	397	419	0.96
12	14	0.0007	0.061	14.2	2.4	1	23	425	447	425	447	0.97
13	14	3.8e-05	0.0034	18.1	3.5	1	23	453	475	453	475	0.97
14	14	7.3e-05	0.0065	17.2	2.9	1	23	481	504	481	504	0.97

Sequence Information

Coding Sequence: ATGGCTTCGCTTACCCATTTAGACCCTGAAAGCCTTATAAAACTGGGGCTCCCAAAACCTACTACAATTGATTTAGTTGGTGGTATACTCTGCCACATATGTCGATTGACATTTGCTAATAAAAAAGAGTATGATGCACATTATGCTACACATGAAACAGACAATACAAAAATAATCTACACATGTGTGGTATGCTATAAAGAAATTGCTGGCTATCCAAGTTTCCGAGGGCACTGTTATACTTCCCATGTTGCTAAAGAAAAATATAAATGTGAGTACTGTTCAAAAAGATTTTCAAAAATAACAGCGTTCAAAGAACATATAAATGTGATGCACAGTTTCAAATGTGGAGCTTGCAATAATGAATTCAACACAAAGAAAGAATTGCAAATGCACAGAATTATACACAATCAAACTGACATGCCCCCATACAACTGTCAGATGTGTGAGACAAAAATTGATTCTGTTGAGGGTTGTCATAAGCACATAGATATGCACTGCAAGTTTATCTATGCATGTCCCATATGTAATGAGAATATACCTAATATCAATAATGCAACTGACCATTTAAAATTTCATTTTGACGAAGAAGTTGATGAGAACGACTTAGAGTTTCCAAAAAAGACAGATATTAAAGAATGTTCTATTGAGAAACTGGGGGGAATCAAATGTTCATTATGCTCTCAAGCATTCAAAAACCGAATGGAGTTTGACACACATTTCTCGTGCAGTCATGGCGATGAAGATATAGTGTACACCTGCACTATGTGTGGAAAAAAGTTTGAAAAGTATTCCGTGTTCAGTAACCATGCTTATTACCATGTTGTAAAGGATAAATTTGAATGCAATATATGCTCCAAAACATTTCCAAGGATCTCCCTGTTAGTAACGCACATGTCTCATTGTCGACGGGACAACAGTGCTACTGGTAAGCCATATGTGTGTGTCAAATGCAATCATCGATATGGAACAGAAAATCGATTTAGAGATCATTTAAGGGAAGCACATGCCATTTTCCAACTACAATGTCAAGAACAAGGTTGTGATGAAAAATTTAATACAAGTAAGGAATTGTTGCTCCATCAAAGGTTCCATTCATCACAGAAAAAGTGGTGTGGCCAGTGCGGCTACCTTTTTACTTCTCTCTCATCATGTCAGCAACATCTGGATGTGCACTGTAAGCAACTCTTCATTTGTCCCATATGCAATCGAAATTACTCTGACAAGCATCCCATATTGAAGCATGTGAATCAGCATTTTGAAACAGTGCTCCACATGTGCAAATTTTGTGGCAAAGTATACAATGCTAAAAATCGTCTTATGGAACATATAAAAACACATTCCGAAACAAAGGTACACTCTTGTAATTATTGTGATAAAAGTTTTATGAAATTGACAACCCTACAAGAGCATTTAAACACACATACAGGGGCGAAGCCATACAAGTGTCCAATATGCCCAAAAACATTTACAGCCTATGCAAATTGGCACAAACATTTGCATAGAATGCATAATGTTGCCGGCGAAAAGTATAGTAAGGAAATGAATAAGTATGTAGATACAAAAGGAACACATAAGGTTGAGAGCAGCAATACAGAAGAAATTGATGATAGCAAGCAAAATGTCAATGAAAAAGAACCAAGTATTGAATATTCTGGAATGGATATTTGTAATAATCTAACAGAACTCATCATGAAGGACAATGAAAATTCAAAATTAGATTCCTATGGTATTAGTGGGCAAGACGACAGTACAATAGAAATAGAATCTGATATAATTGATCATATTACCATTGAAAACGAACTACAACTCTTTGAGAATAACCTCAACACAGAGAACAATGCCATCTCAACTGTGGAAGTGCCATCAACCACAGAGCCTATCCAGGGGCTGATCACAGAGACTTCCCAGTATCCACAGACCATTAACTACCCACGTGAGTATGGCCCTGAATTTACCAACACTGGCTTAGAGACAGGTTGCAGCAGCGGATTCATTAATCTGGATGACCATAATCTGCCACATATTGATCCATTGCTGACCATCAAAATTGAAGAACATAACAGATTGTATGTAAACACACCACACTATCAAGGAAATTTCACACCAAATATTGAATATAACGACTACATCGACACACCCAAATGGGAACCACCGATCATAACTAAAATAGAACAGGATTTATACAACATGACAGAAGCTAACAAGTTAATGTTATTGAACAGTGATAATTTTGAAGTTTTTACATAA
Protein Sequence: MASLTHLDPESLIKLGLPKPTTIDLVGGILCHICRLTFANKKEYDAHYATHETDNTKIIYTCVVCYKEIAGYPSFRGHCYTSHVAKEKYKCEYCSKRFSKITAFKEHINVMHSFKCGACNNEFNTKKELQMHRIIHNQTDMPPYNCQMCETKIDSVEGCHKHIDMHCKFIYACPICNENIPNINNATDHLKFHFDEEVDENDLEFPKKTDIKECSIEKLGGIKCSLCSQAFKNRMEFDTHFSCSHGDEDIVYTCTMCGKKFEKYSVFSNHAYYHVVKDKFECNICSKTFPRISLLVTHMSHCRRDNSATGKPYVCVKCNHRYGTENRFRDHLREAHAIFQLQCQEQGCDEKFNTSKELLLHQRFHSSQKKWCGQCGYLFTSLSSCQQHLDVHCKQLFICPICNRNYSDKHPILKHVNQHFETVLHMCKFCGKVYNAKNRLMEHIKTHSETKVHSCNYCDKSFMKLTTLQEHLNTHTGAKPYKCPICPKTFTAYANWHKHLHRMHNVAGEKYSKEMNKYVDTKGTHKVESSNTEEIDDSKQNVNEKEPSIEYSGMDICNNLTELIMKDNENSKLDSYGISGQDDSTIEIESDIIDHITIENELQLFENNLNTENNAISTVEVPSTTEPIQGLITETSQYPQTINYPREYGPEFTNTGLETGCSSGFINLDDHNLPHIDPLLTIKIEEHNRLYVNTPHYQGNFTPNIEYNDYIDTPKWEPPIITKIEQDLYNMTEANKLMLLNSDNFEVFT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00262075;
90% Identity: -
80% Identity: -