Basic Information

Insect: Eumaeus atala
Gene Symbol: -
Assembly: GCA_017140195.1
Location: JAOYMN010051425.1:10316-15900[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 3e-05 0.0026 18.5 0.4 1 23 210 232 210 232 0.97

2 10 0.0044 0.39 11.6 0.2 2 22 260 280 259 280 0.95

3 10 0.00015 0.013 16.2 0.3 3 23 302 322 300 322 0.96

4 10 3.2e-06 0.00028 21.5 0.7 1 23 326 348 326 348 0.98

5 10 0.088 7.7 7.5 0.6 1 23 353 376 353 376 0.92

6 10 0.046 4 8.4 0.8 1 23 382 405 382 405 0.93

7 10 5.3e-05 0.0047 17.7 0.7 1 23 412 435 412 435 0.98

8 10 3e-05 0.0027 18.4 3.6 1 23 441 463 441 463 0.98

9 10 0.00017 0.015 16.1 4.1 1 23 469 491 469 491 0.98

10 10 1.3e-06 0.00011 22.8 1.0 1 23 497 519 497 519 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	3e-05	0.0026	18.5	0.4	1	23	210	232	210	232	0.97
2	10	0.0044	0.39	11.6	0.2	2	22	260	280	259	280	0.95
3	10	0.00015	0.013	16.2	0.3	3	23	302	322	300	322	0.96
4	10	3.2e-06	0.00028	21.5	0.7	1	23	326	348	326	348	0.98
5	10	0.088	7.7	7.5	0.6	1	23	353	376	353	376	0.92
6	10	0.046	4	8.4	0.8	1	23	382	405	382	405	0.93
7	10	5.3e-05	0.0047	17.7	0.7	1	23	412	435	412	435	0.98
8	10	3e-05	0.0027	18.4	3.6	1	23	441	463	441	463	0.98
9	10	0.00017	0.015	16.1	4.1	1	23	469	491	469	491	0.98
10	10	1.3e-06	0.00011	22.8	1.0	1	23	497	519	497	519	0.98

Sequence Information

Coding Sequence: ATGGAATCTAATATAATGGTGGAAACTCTTCCGATAGTTGGAAACTGTAGTTTATGTACTTTTGATGGTGTAGTGGAAAGTATGTTGATAAAACTCAATAAAGAAGGTGTAAGCCATATGGAAATGTTATTACAGTGTTTTACAATTGATATTACAAATTTGAATTTAGATGATACAAAACTTCTTATATGTAATGCATGCATACAGAAATTGCGAGATTGTCTTGACTTCAAAAAACAGGTTGTTGCAACACTGAAAAACTTGGAAACAGCTGTGTTGATGGAAAAAGTGGATCAGCAAGCATTTCAACATGTGAAGGAGGAAGTAAAGGACGAGGATGCTTTGATGATTGTTACCGACAATGAACTGGATGATGATAACAATGACATAGATGATGAAATTGCAGATTTAAAACAAGAGTCTATGAATATAAGCGACCTAGACGAAATGGTGCTAGACGAGCTGGTTTTAAAGAATGCCAATGCTCACGGATATTGTACAAGGTCGACAAAACCCACAAGCAAAAAGAAAATATCATATACCATGAGAAAAGCGGTCAATTTAAATGAAACGGAAGAAATGATAGAGTCTGGCTTGTTTCCTTTCAAAATATGCAAAAATCAAATGTTTTCCTGCACCATTTGCTCTGAAAAGTACACAAGCTTGGATGATTTGAGGGTGCACATAAAAGACCATACACTATCAAACATACACAGCGCCTTCAGAAAAATGATCAATTCCAACATTCAGGGTTACTACAAATCTTTGTCCAAACTCAAATGTAAAATTTGCAAAACGGACATATCTAATTACGAGGAGCTAAAGCAGCACATCAATACGTGTAGCCGGATCAGAAACACGTCCAGCACTTTACCCTTCAAACTGGAAAAGGACCAGTTAGACTGTCCGATATGTCAGAAGAGTTTCCTAAATTTCGTCAGTCTTAACACCcacatgaacgtgcattatccgaaccacgtctgcgagagctgcgggaaagctttcgcgtcgaaagctagattgcgaggccatatgaggacccacgaggtgggagactttccgtgcagatattgcgacgctgtgttcaataaagtcaccaaacgggagaaccacgtatcgaaagaacacaaatccggcatcagatacacttgcaaacgctgcaatatctccttgacgtctttctacgctcggcagaagcatctggccgaagtacataatgaggagttgaagagatacaagtgcaaagcttgcccgcagagctacataacacctggacatttgtcgagccacgtgagaagggaccatttgaacgagagaaaccacaagtgcaataaatgtgatttagccttttacacgaggaattcactaaagatgcacatgatcaaacacgacggagccagaatccacacttgtaacatatgcatgaagtcgtaccagaggaagaaaacactgagagaacatatgagaattcatgataatgataagagatttgtgtgtcccgtttgtggcagagcattcactcagaagtgcacgttgaaaggtcatttgaAAGTTCATGAACGGAAAATGGATGTGGACGATAGGATTCCACAGCCTTTACATTCTATTTAG
Protein Sequence: MESNIMVETLPIVGNCSLCTFDGVVESMLIKLNKEGVSHMEMLLQCFTIDITNLNLDDTKLLICNACIQKLRDCLDFKKQVVATLKNLETAVLMEKVDQQAFQHVKEEVKDEDALMIVTDNELDDDNNDIDDEIADLKQESMNISDLDEMVLDELVLKNANAHGYCTRSTKPTSKKKISYTMRKAVNLNETEEMIESGLFPFKICKNQMFSCTICSEKYTSLDDLRVHIKDHTLSNIHSAFRKMINSNIQGYYKSLSKLKCKICKTDISNYEELKQHINTCSRIRNTSSTLPFKLEKDQLDCPICQKSFLNFVSLNTHMNVHYPNHVCESCGKAFASKARLRGHMRTHEVGDFPCRYCDAVFNKVTKRENHVSKEHKSGIRYTCKRCNISLTSFYARQKHLAEVHNEELKRYKCKACPQSYITPGHLSSHVRRDHLNERNHKCNKCDLAFYTRNSLKMHMIKHDGARIHTCNICMKSYQRKKTLREHMRIHDNDKRFVCPVCGRAFTQKCTLKGHLKVHERKMDVDDRIPQPLHSI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00289069;
90% Identity: -
80% Identity: -