Eata009418.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Eumaeus atala
Gene Symbol
-
Assembly
GCA_017140195.1
Location
JAOYMN010006832.1:12451-21606[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 16 0.03 2.6 9.0 2.4 1 23 230 252 230 252 0.96
2 16 0.088 7.7 7.5 0.1 3 23 282 303 280 303 0.93
3 16 0.008 0.71 10.8 0.5 2 23 324 346 323 346 0.95
4 16 0.00027 0.024 15.4 2.2 2 23 352 374 351 374 0.95
5 16 0.025 2.2 9.3 1.1 1 23 379 402 379 402 0.93
6 16 0.019 1.7 9.6 0.8 2 23 405 427 404 427 0.95
7 16 0.0021 0.19 12.6 1.2 2 22 434 454 433 454 0.95
8 16 0.0023 0.2 12.5 0.6 1 23 511 534 511 534 0.93
9 16 0.35 31 5.6 0.1 3 23 563 584 561 584 0.94
10 16 0.06 5.3 8.1 0.2 3 23 608 630 606 630 0.94
11 16 0.00041 0.036 14.9 0.6 3 20 637 654 635 658 0.90
12 16 0.0065 0.57 11.1 0.4 1 23 663 686 663 686 0.97
13 16 0.00076 0.067 14.0 0.5 2 23 692 714 692 714 0.94
14 16 3e-05 0.0027 18.4 4.7 1 23 718 741 718 741 0.97
15 16 0.00013 0.011 16.5 0.6 2 23 748 769 747 769 0.96
16 16 0.0032 0.28 12.1 3.3 1 23 775 797 775 797 0.98

Sequence Information

Coding Sequence
ATGGAATTTGACGAAGTAGTTGTGAAGGACAGTCCCGGTTTATGCCGGTGCTGTCTTTCTGAGGGTTGTTATAAGGACATGGGATCAGAGTATGTTTGGATGAGTGAGAGTGAGGTATATGCAGATATGTTATTAGACTGTTTCGATATAAGTATATCACAGCACAATGATGGGCCTAATGGTCCCAACAGGCTTATCTGTGAAGTTTGCATCACAAGGCTACGTGATGCTTGTAATTTTAAGAAACAAGTACATGATTCAGAGAAGAAGTTTGTTGATATGGTTGGGAAAGGTGAATTCAGGAAAACAGTTGTAACATATCAGGATCCTATGAAATCAGAATGTGCCGTTCAACCTGATGTGACTGATGTGGAATATCTTGATGAAGATTTGGACTTTGGAAATGATAATTTGAGTGAACCGATAGAAACTGAGGCGGCCGTTGAAGAGGACATAACGGTATCGATGTTGCCAGTTAAAACGAAAAGAGGCAGGCCAAAAAAATCTGTTGTAAAACCCGAAAAAGTGAAAGTGCCTAAACTTGAAGAGAAACCAAGGACCTCTAAAGTTGCTAAAGATGTAAAAATGCGGAAAGTCAAAGGCGAATCGTCATCGATGCGTAGACGTAAAAATCTTCAAATATTGTTCAATAACACGACAATAATTCCATTCAAATGGCGCGGGAGATATCTATGCTTCTATTGCAGCAAAGATAGCTCTGAATACACTGAACTACGTAAACATACGAAATCGCATGGAAACTGCTCTACCAAAGATCATTCTTTGAAGGTATTGAAAGGTGGCCAGAATATGGAAATCAAAATTGATATATCTGAGATGAACTGTGAAATATGCAACGAAGAGTTTCCTTTGTTCGATGGACTAATTGATCATTTATACAGCAAACATAGCCTGGAATACGAGAGGGACGTAGATATGGCAATCGAGGAATATAGACTTGTGGATTTGACTTGTGTAACATGCAACGAGAGATTTACTTACTTTGGATATTTAGTATCGCATGTGAACAGTAATCACCCGAAAAAATGTCTCATGTGCGATAAATGTGATCAAAAATTTAACAAAAAGAGAGACTTGTTTTCACATATCAAAAATTACCACCGAGAAGGAGGGTATACATGTGATGTTTGTTCCCAAAATTTTAGCTCGTTGAACATACTGAGGAAACACAGGGACAATCGGCACTTGACCACGTGTAACATATGCCATTTGAAACTACCTTCCGCTTCGCTTAAACAGAAGCACATGGAAATCGAACACCCCGACGACGGCTCCCTGCAATGTGAAATATGTTACAAAGACTTTCATACTAAACAAGGACTGAAAATGCATTTGCGAAAATGTAAAGGTGATATATACGATGTAAGTGTAAAGAAAGAGGACGGAGCTATGGATACCGATATCTTTTATGAAACAGCAAAACGTCCTAGCGTGAAACAGATCAGAGAGAATATTGTAATAGTCATCAATATGTCTACTGCGATACCATTTAACTTTTACAAAAACAAATTCAATTGCTTCTATTGCTCCAAAGACTTTCCTGATTCGGATTCAATGAGAGAACACACCGTCATGGAACATCCAACTTGCGACACTAAGGAAAAATGCATTAAAAAGTGCCGAGAATCAGTCGCGTGCGTAAAAATTGACGTATCATCTCTGGCGTGTAAGGTTTGCTTCGAATCAATGAAAGACCTAGACGCTTTACTTGATCATTTGATAATGAAACACCAAGCCAATTATGATAAATCTATCACAACTTGTTTGCAACCTTATAATCTTATCAAAGATCACATGGCGTGTCCGAATTGTCCAAACGAAGTATTCAGGTTTTTCGGCACACTGCTGAAACATATGAACAATGAACATACAAATAATAATATTATATGTGTCTATTGTGGTCAGACGTTTAGAAGAGATCAAAATTTAAGGGTGCATATTTGGAGACACCATAGAGATGGAAGATTTAAATGTAATATATGTGGAGCTGAATGCAATATACCATCTAGACTGTACATGCACATGGCCAAAGCTCATGGCGTTAAAGCAGCGAAGTGCACAAAATGTCCAGAAACGTTCGCCACACAATATCTGCGTCAGAAACATTTAATTGAAATTCACGATTCGGGACACAAGTGTTCATACTGTGGGAAATTGTTTACACGTAATTCTTTCATGAGAGATCATATAAGACGGACACACTTGAAAGAGAAAAATGTGGAATGCTCCATATGTAATATGAAGTTCTTTAATAATATCCTTTTAAGGAGACACATGGTGAAGCACAGCGGAGAAAAGAACTATCACTGCGAAATGTGTGGAGAAAGGTTTTATTGGAGGAAAAGTCTTCGAAGTCACATGACAAGACACGGAAAACACATCCCTGTACAGATCTAA
Protein Sequence
MEFDEVVVKDSPGLCRCCLSEGCYKDMGSEYVWMSESEVYADMLLDCFDISISQHNDGPNGPNRLICEVCITRLRDACNFKKQVHDSEKKFVDMVGKGEFRKTVVTYQDPMKSECAVQPDVTDVEYLDEDLDFGNDNLSEPIETEAAVEEDITVSMLPVKTKRGRPKKSVVKPEKVKVPKLEEKPRTSKVAKDVKMRKVKGESSSMRRRKNLQILFNNTTIIPFKWRGRYLCFYCSKDSSEYTELRKHTKSHGNCSTKDHSLKVLKGGQNMEIKIDISEMNCEICNEEFPLFDGLIDHLYSKHSLEYERDVDMAIEEYRLVDLTCVTCNERFTYFGYLVSHVNSNHPKKCLMCDKCDQKFNKKRDLFSHIKNYHREGGYTCDVCSQNFSSLNILRKHRDNRHLTTCNICHLKLPSASLKQKHMEIEHPDDGSLQCEICYKDFHTKQGLKMHLRKCKGDIYDVSVKKEDGAMDTDIFYETAKRPSVKQIRENIVIVINMSTAIPFNFYKNKFNCFYCSKDFPDSDSMREHTVMEHPTCDTKEKCIKKCRESVACVKIDVSSLACKVCFESMKDLDALLDHLIMKHQANYDKSITTCLQPYNLIKDHMACPNCPNEVFRFFGTLLKHMNNEHTNNNIICVYCGQTFRRDQNLRVHIWRHHRDGRFKCNICGAECNIPSRLYMHMAKAHGVKAAKCTKCPETFATQYLRQKHLIEIHDSGHKCSYCGKLFTRNSFMRDHIRRTHLKEKNVECSICNMKFFNNILLRRHMVKHSGEKNYHCEMCGERFYWRKSLRSHMTRHGKHIPVQI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00013343;
90% Identity
-
80% Identity
-