Basic Information

Insect: Eumaeus atala
Gene Symbol: -
Assembly: GCA_017140195.1
Location: JAOYMN010034921.1:29270-45424[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.16 14 6.7 2.4 1 23 547 569 547 569 0.97

2 11 0.0022 0.19 12.6 3.0 1 23 583 605 583 605 0.97

3 11 3.4e-06 0.0003 21.4 3.8 1 23 611 633 611 633 0.98

4 11 0.00013 0.011 16.5 5.5 1 23 640 662 640 662 0.98

5 11 1.6e-05 0.0014 19.3 0.3 1 23 668 690 668 690 0.93

6 11 1e-06 9.3e-05 23.0 0.1 1 23 696 718 696 718 0.97

7 11 8.8e-06 0.00077 20.1 0.5 1 23 724 747 724 747 0.95

8 11 0.00034 0.03 15.1 1.0 1 23 753 776 753 776 0.95

9 11 0.00027 0.024 15.4 0.4 2 23 783 804 782 804 0.96

10 11 9.5e-06 0.00084 20.0 1.3 1 23 810 832 810 832 0.98

11 11 0.0017 0.15 13.0 0.3 1 23 838 862 838 862 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.16	14	6.7	2.4	1	23	547	569	547	569	0.97
2	11	0.0022	0.19	12.6	3.0	1	23	583	605	583	605	0.97
3	11	3.4e-06	0.0003	21.4	3.8	1	23	611	633	611	633	0.98
4	11	0.00013	0.011	16.5	5.5	1	23	640	662	640	662	0.98
5	11	1.6e-05	0.0014	19.3	0.3	1	23	668	690	668	690	0.93
6	11	1e-06	9.3e-05	23.0	0.1	1	23	696	718	696	718	0.97
7	11	8.8e-06	0.00077	20.1	0.5	1	23	724	747	724	747	0.95
8	11	0.00034	0.03	15.1	1.0	1	23	753	776	753	776	0.95
9	11	0.00027	0.024	15.4	0.4	2	23	783	804	782	804	0.96
10	11	9.5e-06	0.00084	20.0	1.3	1	23	810	832	810	832	0.98
11	11	0.0017	0.15	13.0	0.3	1	23	838	862	838	862	0.94

Sequence Information

Coding Sequence: ATGCGGGTGGAAATATATATGAACATGGTGCTAGATATTTTAATTCTGTTTTCAGATGGCGATCCTCTCACCAACAGTTGCTTTATATGCAACTCGGCGGCAATCGTCGTGAGGGTGGTGGTGGACATATTCAAAGATGAGAAACCACTTAAGTCTGGCAAGAAGCTGTGCGAGGTGGTCGGTGAGATTGTGAAGAAGCCGGTGGTGGTGGACGGAGTGCACTCCCCGTCTCTGTGCTCCAAGTGCCACAAGATCGTGGTGGAGTACGACTGCCTGTGGAGCAGATGCAGAAAAATCGAAGCAGACCTTTTGGAGAGTTTCAAAAAGACACTTGCCAAATTTAATTTTGACTATGATACATACTATCTGAAGGGTCCGAAGCTGAGCACAGATAAAAACGACCCTTCGCTGGTCACCGGATGGAGCGAAGCCAGTATTTCTACAAAGGGAACGAGCGAAGCGATTGCCAACAGTCCGGAAAGCGAGAAAGCCAGTATTGTTGTCCGGGGAAGCAAGGAAGCCGACTTATCTGTAGAGAAAAAAATGCCGATGTTTGATGGGATGAAAATTGTCTTGTCTGCATCTAAATTACAACCGCTTCCACCAAATTTCGTCTTAAAATCAGGATCATTTCCGCCGGCACCGATCAAGACAAATTTTCCAGTTGTTCCCAAATTGCAGCCAATACCAACACAAAGTGCAAACCAAATCGCCCAAACTAGCCCACTCAAGCCCTTCCAAAGCAAAATGACTGTGGAACAAAAGTTGATATCCAACAAAATTGGCAAACTCAAGACGGACTTGTTCAACAAAACCCAAAAAGTCCCTGTAGTGAGATTAAGTACCGACAGTGGGCAGTTGATAAAGACAGAAATTGCATCTTTGTTGAAGTTCGATAATAAAAGTGATAATGTGTATACGCTGGATATGCCCAAATATCTGCCAAATGCGATGGTGGCTGATGATGTGAAAAGAGAAATGGCCTTAAGTGATGATGAGGCTGTGGATAATCCGATGGAGATAGATGAAGAATGCTCGCTGGCGGTGCTGTCACAAGACAAGCTAGAGGGCGAGCAAATGTTCGAGAAGCTGGACGAGCAGACGGGGCCGGAGAAGGGCACGTACGTGCGCCTGGTGCCGTCCGAGGAGGTGGTCAAGCTGCAGATCATCGACAAGGCCGAGGAGGACGACGCGGAGGAACATACGATAGTAGTGGACGAGGATGGATCCATAATTAGACTGGTATCGGGACAGAAGCTGATGATTGGGGACAACGAGATCTCGCTGGTGATGCCCGGGGACGGGGACGTGGGGGACAGCCGAGATTCCAACGACGAGTCCCAAATCGAGTTGCAAGTGTCCGGAGATGAGGAGACGGCCAATGCCATCATAGCCGCGGCGCAGGAACAGGGTGGAGCGTTCATCAAGGTGGAGTCGGGAGAGATGTACCGAGTGCAGTCCATTCAGAGCAAAGAGGACAGCGGGGACGAAGCCGACATCGATTTCCAGGTGGAGAGGAAGGGGGACGGCAAGTATCGCTGTCGCTTCTGCGAGAAGTACTTCCACTCGGAGATGGTGTTCGAGGGCGACGCCAGCGCCATGATGCAGCACCTGAAGTCTGCTCACGACGCGCGCATCTACATATGCTCGGTGTGCTGCAAGTTCGTACGCAAGAAGTCGGACTACGTCAAGCATCTGGCAATGCACGCGGACGGCGAGTACAGCCCAACCGAGCGGGCGCGGTCGCACGAGTGCGGCGTCTGCCACAAGAAGTTCGCCTCGCGCGTGCTGCTGGCCGAGCACACACACGTACACGCCGGCGCGCGCCCGCACGTGTGCAGCGTGTGCAACAAGAGCTTCGCGTCCAAGTACACGTACCAGTCGCACATGAAGACACACACGAACCGCCCCCGGCCGCACAAGTGCAGTCAGTGCCAGAAATCCTTCTTCACCCAACAAAACCTGCTGCAGCATGAGAAGACTCACTCCGGCATCAAGGACTTTGTGTGCAAGATATGCAACAAGGCGTTCGGCACACAGCACAACCTGGAGGTGCACGGCGTGGTGCACTCGCGCAAGAAGCCCTTCGCCTGCTCCGACTGCGGGAAGGCGTTCGCGAGGCGAGCAGAGCTAAGGGACCACGCACGCATACACACCGGCGAGCGCCCATTTGCGTGCGAGGTTTGCGGCGCGCGATTCACGCAGCGCTCCAACCTGTACTCGCACCGGCGCGCCACGCACATGGACGACAAGCGGTACGCGTGCGACAGGTGTCCGAAGCGCTTCAAGCGACGTAGACTCTTAGACTATCACATAAAGGCGTCACACACGGGCGAGCGACCCCTGTCCTGTGACCTCTGTCCCGCGACCTTCGTGTACCCCGAGCACTACAAGAAGCACGCCCGCATACACAGCGGGGAGAAGCCCTACGTGTGCGAGATATGCGGCAAGTCCTTCAACTCCCGCGACAACCGCAACATGCACCGCTTCACGCACAGCGAGCGCAAGCCGTACGAGTGTCTGGTGTGCGGGCTCGGCTACATGCGCAAGCAGCTGCTCTACCAGCACATGAACACCAGGGGACACATGGCAGAATCCATTGTCGTCAACCAGCCGCGGCTAGTGGAGTCCACTGGGGCTCTGAAAACCGTAATAGACGTCGACAGTCGAAGTATGGACGCCTCCGAAACGATGTATGAGACCAGGGAGACGGCGGACAGAGACAAGATGCTGGCTACAATGCAGCACTACTTCCTACTATCAATGATCGCCAAGACGTCTGATACTGTGCACATATGCCTTCCGGCCGCGACTGTGGACACTAACATAATTGCGCTTGCAGGTAAAACCATCAGCATACCTCAAGATGGAGAGGCGACGCTATTGaccatacATAACATCGAGGGCGAGCTGAAGACTGAAGGTCTACTGGAGACGGTGTCCGTGGACCAACTCGACCACACGCAGTTGGGAGAGAGGGTGCTGCTGTCTGCTGGCGGGGGCGTTCAGGGAAGCGAAGGAGTCATGCGGCTGGTGCAGGTGCAGCTGCCCGGTGGCGATTGCGGGTGGGTGGCCGTCGACTGA
Protein Sequence: MRVEIYMNMVLDILILFSDGDPLTNSCFICNSAAIVVRVVVDIFKDEKPLKSGKKLCEVVGEIVKKPVVVDGVHSPSLCSKCHKIVVEYDCLWSRCRKIEADLLESFKKTLAKFNFDYDTYYLKGPKLSTDKNDPSLVTGWSEASISTKGTSEAIANSPESEKASIVVRGSKEADLSVEKKMPMFDGMKIVLSASKLQPLPPNFVLKSGSFPPAPIKTNFPVVPKLQPIPTQSANQIAQTSPLKPFQSKMTVEQKLISNKIGKLKTDLFNKTQKVPVVRLSTDSGQLIKTEIASLLKFDNKSDNVYTLDMPKYLPNAMVADDVKREMALSDDEAVDNPMEIDEECSLAVLSQDKLEGEQMFEKLDEQTGPEKGTYVRLVPSEEVVKLQIIDKAEEDDAEEHTIVVDEDGSIIRLVSGQKLMIGDNEISLVMPGDGDVGDSRDSNDESQIELQVSGDEETANAIIAAAQEQGGAFIKVESGEMYRVQSIQSKEDSGDEADIDFQVERKGDGKYRCRFCEKYFHSEMVFEGDASAMMQHLKSAHDARIYICSVCCKFVRKKSDYVKHLAMHADGEYSPTERARSHECGVCHKKFASRVLLAEHTHVHAGARPHVCSVCNKSFASKYTYQSHMKTHTNRPRPHKCSQCQKSFFTQQNLLQHEKTHSGIKDFVCKICNKAFGTQHNLEVHGVVHSRKKPFACSDCGKAFARRAELRDHARIHTGERPFACEVCGARFTQRSNLYSHRRATHMDDKRYACDRCPKRFKRRRLLDYHIKASHTGERPLSCDLCPATFVYPEHYKKHARIHSGEKPYVCEICGKSFNSRDNRNMHRFTHSERKPYECLVCGLGYMRKQLLYQHMNTRGHMAESIVVNQPRLVESTGALKTVIDVDSRSMDASETMYETRETADRDKMLATMQHYFLLSMIAKTSDTVHICLPAATVDTNIIALAGKTISIPQDGEATLLTIHNIEGELKTEGLLETVSVDQLDHTQLGERVLLSAGGGVQGSEGVMRLVQVQLPGGDCGWVAVD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -