Basic Information

Insect: Eumaeus atala
Gene Symbol: -
Assembly: GCA_017140195.1
Location: JAOYMN010006425.1:4656-9798[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 2.4e-05 0.0021 18.7 2.1 2 23 131 152 131 152 0.98

2 11 4e-05 0.0035 18.1 2.8 1 23 158 180 158 180 0.98

3 11 0.02 1.7 9.6 6.6 1 23 232 254 232 254 0.98

4 11 0.79 70 4.5 0.2 1 23 261 283 261 283 0.95

5 11 2.4e-05 0.0021 18.8 2.2 1 23 289 311 289 311 0.99

6 11 2.5e-05 0.0022 18.7 0.5 1 23 317 339 317 339 0.96

7 11 0.00024 0.021 15.6 2.1 1 23 348 370 348 370 0.98

8 11 5.5e-05 0.0049 17.6 0.6 2 23 417 438 417 438 0.97

9 11 0.0067 0.59 11.1 5.4 1 23 455 477 455 477 0.96

10 11 1.1e-06 9.6e-05 23.0 0.7 1 23 483 505 483 505 0.98

11 11 2.3e-07 2e-05 25.1 3.1 1 23 511 534 511 534 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	2.4e-05	0.0021	18.7	2.1	2	23	131	152	131	152	0.98
2	11	4e-05	0.0035	18.1	2.8	1	23	158	180	158	180	0.98
3	11	0.02	1.7	9.6	6.6	1	23	232	254	232	254	0.98
4	11	0.79	70	4.5	0.2	1	23	261	283	261	283	0.95
5	11	2.4e-05	0.0021	18.8	2.2	1	23	289	311	289	311	0.99
6	11	2.5e-05	0.0022	18.7	0.5	1	23	317	339	317	339	0.96
7	11	0.00024	0.021	15.6	2.1	1	23	348	370	348	370	0.98
8	11	5.5e-05	0.0049	17.6	0.6	2	23	417	438	417	438	0.97
9	11	0.0067	0.59	11.1	5.4	1	23	455	477	455	477	0.96
10	11	1.1e-06	9.6e-05	23.0	0.7	1	23	483	505	483	505	0.98
11	11	2.3e-07	2e-05	25.1	3.1	1	23	511	534	511	534	0.98

Sequence Information

Coding Sequence: ATGTTTGTGGACGAGCTGCTGGTGCGGAAGATGCGGGGGAGACGGCGACGTGAAGAGCGAGGCGTGAGTATTTTTGTGGACGAGCTGGTGGTGCGGCAGGAGCGAGACAGACGGCGACGTGAAGAGCGAGGCGTGAGTATGTTTATGGACGAGCTGCTGGTGCGGCAGGAGCGAGGGAGACGGCGACGTGAAGAGCGAGGCGTGAGTATTTTTGTGGACGAGCTGCTGGTGCGGCAGGAGCGAGGGGGACCTCGACGTGAAGAGCGAGGCGTGAGTATGTTTGTGGACGAGCTGCTGGTGCGGCAGGAGGGCTCCGACGAGGACTACTTCCCGTCCAACACGTGGGCGGTGACGCCCAAGGAGGAGCCCCCGACCAAGCCGAGTAAGCGCGAGTGCCCCGTCTGCCACAAGCACATCAGCTCCGCTTCGTACTTGCGGGTCCACCTGCGGACCCACTCCGGGGAGAAGCCCCACCAGTGCCCGCAGTGCGACCAGTCCTTCATCACCGCCAGCAAGATGCACAGGCACGCGCTCACCCATCCGGAGACGTGGACAGACGACATCAAATCTGAAGTTAAAACCGAAAAGGAAGATGGGGAGGAGGATAACAAGGTGAGGATGAAGAAGGCTCTCGCGAAGTTCACGAAGAAGTCCAAGAAGGGAGATAAGAAAAAGAGCTACCAGCGGCGACCCTACTCCTGCGAGTTCTGCCACAAGCGCTTCCTGCACTCGGAGACGTTACAGATTCACAAGAAGTCTCATGATGGCGAAGCCCTGGTGTTCAAGTGCAACTTTTGCCTCGCGGAACAGACGGATGCGGAGGCGCTGCGGACGCACGAGAGCACCCACACAGGTCCGAAGCCCTACCAGTGCACTATCTGTGGCAAGAGCTATACAAAACGGGAGACTATGGTATACCACCGCAAGTCCCACTCGACTAACACGCTGCACATCTGCGACATCTGCACCAAGTCATTCAGCGCGGCGGGCAAGCTGCAGCGGCACCTGGCGAGCCACCGCGCCGGCCGCTACGTGCTGCGCTATGAGTGCCCCGTGTGCGCGCACATGTTCAACACCAAGTACCACGTGCAGATGCACCTCGCCACCCACCAACGGGAGGGCCTAATACAAGAGGAGAACCGCAACGAAATCCTGGCGATGGTGCTGCAGAACGCCCGCAAGATCCCCAAACAACCCGACGCGCCTGCCAACCTGTCCGACACAGCGCCTACAGACGAGCGAAGCCGCGTGTGCAACATATGTGGGGAAGTTTTCCAACATTTCTATTACCTAGAAGAACATCTCAAAAGCCACGGCTCAAAAATAGCCATCGAGGACAGCGAAAAGGCAGAAGAAAAGAAACATGTTTGCGGAGTTTGCAACAAAAGCTTCAAGTTGCACTACTATCTCAAGCTGCACAGCTTTACCCACACTAAAGAAAAACCGTTCATATGCCAGCAGTGCGGTAAAGGGTTCATAACCAGGGGCAAACTGAAACGACACCTGGAAACACATTCCGGACTCAAGAAGTATCAGTGCCACATCTGCTACAAGTTCTTCACACGGCCAAGCTACCTCAGGATCCACGTCAGAACAATACACGGGACACAGGATTACAACTTTAGGTTTGATTCCTCCAGAACCGAAGATTACAGTGTGGGTTCTATGATTGATGATGTATAG
Protein Sequence: MFVDELLVRKMRGRRRREERGVSIFVDELVVRQERDRRRREERGVSMFMDELLVRQERGRRRREERGVSIFVDELLVRQERGGPRREERGVSMFVDELLVRQEGSDEDYFPSNTWAVTPKEEPPTKPSKRECPVCHKHISSASYLRVHLRTHSGEKPHQCPQCDQSFITASKMHRHALTHPETWTDDIKSEVKTEKEDGEEDNKVRMKKALAKFTKKSKKGDKKKSYQRRPYSCEFCHKRFLHSETLQIHKKSHDGEALVFKCNFCLAEQTDAEALRTHESTHTGPKPYQCTICGKSYTKRETMVYHRKSHSTNTLHICDICTKSFSAAGKLQRHLASHRAGRYVLRYECPVCAHMFNTKYHVQMHLATHQREGLIQEENRNEILAMVLQNARKIPKQPDAPANLSDTAPTDERSRVCNICGEVFQHFYYLEEHLKSHGSKIAIEDSEKAEEKKHVCGVCNKSFKLHYYLKLHSFTHTKEKPFICQQCGKGFITRGKLKRHLETHSGLKKYQCHICYKFFTRPSYLRIHVRTIHGTQDYNFRFDSSRTEDYSVGSMIDDV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -