Eata010405.1
Basic Information
- Insect
- Eumaeus atala
- Gene Symbol
- -
- Assembly
- GCA_017140195.1
- Location
- JAOYMN010000004.1:154932-165036[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.8e-11 6.3e-08 32.6 0.0 4 39 161 197 160 201 0.90 2 2 3.6e-05 0.06 13.4 0.2 1 26 212 237 212 237 0.96
Sequence Information
- Coding Sequence
- ATGCCTGGCCACGACTTGAGCCTGCTGAAATGTGAACCCACCTCCAGCGAGCACGATGGCGCGCAGCCGGCTACATCTGACCTGTGGTACTCGGCGCAACCGGGAGCGCACGCGGAGAATCCTGCATCACACTTGCTGCATCATTTACAGGGGACGCTGGAGGAACTGGTACCGGCGCCCGCTGGCCCCGCGGCGACGCCGGTGCGCGAGCACCTGCCCTCGCCCGGGGAGCTCTCGCTGGCAACTCTGCAGCCCGCACCACTGGGAAATGCAATGGGTGCTTCAGTCATCGACATGCACGTAAAAATGATGAACGTGCAGGAAGTGGCAGATTCTGCGGACTTCGTGCCTCTGATGGCCGTCAAAGACGAACCATCGTCTGAAGGAGAGCAGGCTGCGGTGAGCGGCGACGACACCAGCGACTCGGGCGGCGCGCCGGAGGCCCCCGGCCGCGGCAGCCCTAAGGCGTGGTCGGCGCGGGACATGGATAACGCGCTGGACGCACTGAGAACCCACCACATGAGTCTCACCAAAGCTTCGGCTAAGTTCGGTATTCCGTCCACCACATTGTGGCAGAGAGCGCATAGACTGGGCATAGACACACCCAAGAAGGAGGGCTCATCGAAGTCCTGGAGCGAGGAGGACTTGAAGTCAGCATTGCACGCGCTCCGAGCTGGCACTATATCTGCTAACAAAGCCAGCAAGGCTTATGTGCTTGTCATTAAGGGTGATCCATCAAAACGTCCGCTTGGATTTAGGGTGTTCGACGCCTGCGCTGTAGCCCAGGGCTCGTACTCCTGCCCCCTCTGTCCTATCCCCGCCGAGGCAAGGGGAGTAACAAACAAAATTAGATATTCGTGTGGTGTCCCCGCAAAGCGGCAAGTGCACCCTGATTGA
- Protein Sequence
- MPGHDLSLLKCEPTSSEHDGAQPATSDLWYSAQPGAHAENPASHLLHHLQGTLEELVPAPAGPAATPVREHLPSPGELSLATLQPAPLGNAMGASVIDMHVKMMNVQEVADSADFVPLMAVKDEPSSEGEQAAVSGDDTSDSGGAPEAPGRGSPKAWSARDMDNALDALRTHHMSLTKASAKFGIPSTTLWQRAHRLGIDTPKKEGSSKSWSEEDLKSALHALRAGTISANKASKAYVLVIKGDPSKRPLGFRVFDACAVAQGSYSCPLCPIPAEARGVTNKIRYSCGVPAKRQVHPD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -