Eata022473.1
Basic Information
- Insect
- Eumaeus atala
- Gene Symbol
- -
- Assembly
- GCA_017140195.1
- Location
- JAOYMN010000853.1:1-3974[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.014 23 5.1 0.0 32 45 1 15 1 15 0.95 2 2 1.5e-18 2.5e-15 56.3 0.0 2 42 23 64 22 65 0.95
Sequence Information
- Coding Sequence
- ACTTTGTATGGAAGGTGTAAGCGAGAAGGGATAGAGTTATCCCGTTCTAACCCCACCCCGTGGTCCGAGGGCGCCATGGGAGAGGCGCTGGAAGCTGTCCGGGTCGGTCAGATGTCCATAAATCAGGCCGCGATACACTACAACCTGCCCTACTCGTCGCTGTACGGCCGGTTCAAGAGGTGCAAGTATCAGCCGGCGCCGACAACTCAGTCGGACACAACGTTCCCGGACCCCGCTCACGACACGAACCAACCACCGCCCCTCGGCCCTACCGAGTATCTGTACAACGAGGTGCAGGAGCGCCCCTACGGCGAGGTGCAGGCGCGGCCCTTCAGCGACGTGCGCCGGGCCCTGTCTGCGCTGGAGACGTACCCGCTAGCGTGTGACGTAACCAGCTGA
- Protein Sequence
- TLYGRCKREGIELSRSNPTPWSEGAMGEALEAVRVGQMSINQAAIHYNLPYSSLYGRFKRCKYQPAPTTQSDTTFPDPAHDTNQPPPLGPTEYLYNEVQERPYGEVQARPFSDVRRALSALETYPLACDVTS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -