Eata024516.1
Basic Information
- Insect
- Eumaeus atala
- Gene Symbol
- Mblk-1
- Assembly
- GCA_017140195.1
- Location
- JAOYMN010000017.1:396086-407486[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.2e-16 1.4e-12 47.5 0.0 1 39 68 107 68 112 0.93 2 2 4.2e-19 6.9e-16 58.0 0.0 1 43 274 317 274 319 0.95
Sequence Information
- Coding Sequence
- ATGTCGATAAGGGTCCCAGAGGTGGGCGACAAGGTCGCCGCGCCAAGCTCGTCGCCCACGGCGGCGGAGCAACCGCTCGACCTGAGCGCCAAGTCCACCTCCAGCACCAGCGGCACCCCGCCACCTGACGGCAAGAACAACGACATCTCAAGATTAAAACGAGCGGTCGTGGACGGCGTTGGCAGCAGCAGACGAGCCTACACCGAGGATGAGCTCCACCAGGCGCTCAGAGACATCCAGTCTGGCAAGCTGGGCACCAGGCGAGCAGCCGTAGTGTACGGCATACCTCGCTCCACCCTTCGCAACAAAGTCAATAAATTCGGCCTTACCACAGATACAGGCCAGGATTCGGACCCTGATAGCGACGTCGAGAAACCAGACTCTCCCCCCTCGGTCATACTCAAAATACCAACCTTCCCCCCGCCGGAGGATAAAAGCCCCTCCCCGGCAATACCGGTGACCACACCTGTTACGCCTCTGACCCCCATCATGCAGCCGCTAAACGCGCCGTCACCACTCTTACTACCCGCGTCGGTCTTCGCGGATCCCCCTTCAAACCAGCACCTCTTCACGTCCCTAAGTGACGTCATAGCTAAGAGCATCAGTCAGAAGTTCCAACAGCCCCTAGATAGGCCTCCACAGCCGACAGATCTACAATTCATGAGGCCCGACCGTCACGTGTCCGTCATTAAAACGCCACCAGATAACCAGAGGAATTATGCGATGCCCAGCCATTCCAAGGGCACAACGAATAACAACGGTCAGCCCGCTGTGGGAGGCAAGGGCACGAGGCCGAAAAGGGGAAAATATAGGAATTACGACAGAGACAGTCTAGTGGAGGCTGTGAAAGCGGTCCAGCGAGGCGAGATGTCGGTCCATAGAGCCGGATCATACTACGGAGTTCCTCATTCTACGCTTGAGTACAAGGTGAAAGAGCGGCATCTCATGCGGCCAAGGAAGAGAGAACCGAAGCCACCGCAAGACATCAAGCCGCAGCCACCGAAGCCAGCTCCGAAGCCAACAAAGCCATTTGCAAATGGGCTTAATGGTCCGGAGCCAGGCTACCCGCCTGGATATCAATTCTGGCCGGGGAGTGGTTTTCCCTCTCCCGCGCCGGACCTTTACGCTTCGCACATGATGCGGCGGCTTCGTGAGGAGGCGCCGCCGCCCGCGAACGGTTCCTTCCTCGAGGGTATCATCCGGTCGAGTTTGGAGCGGCCGGGAGCTGCACTGCTGTTGGGCGGAAACCGACGCGCGGATCCCTGCGGGGAGCCACCGGCGCGCCGTCCCCGGTTAGAAGATCACGCGCTGGCCGCCGATCTGCGAGAGACGGTCCAGCGGCTGAGGGCGGACAAGCTGCGCCCGCGCAACGGAACCCCCACCCCTCCGCCGGACGCCTAG
- Protein Sequence
- MSIRVPEVGDKVAAPSSSPTAAEQPLDLSAKSTSSTSGTPPPDGKNNDISRLKRAVVDGVGSSRRAYTEDELHQALRDIQSGKLGTRRAAVVYGIPRSTLRNKVNKFGLTTDTGQDSDPDSDVEKPDSPPSVILKIPTFPPPEDKSPSPAIPVTTPVTPLTPIMQPLNAPSPLLLPASVFADPPSNQHLFTSLSDVIAKSISQKFQQPLDRPPQPTDLQFMRPDRHVSVIKTPPDNQRNYAMPSHSKGTTNNNGQPAVGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPPQDIKPQPPKPAPKPTKPFANGLNGPEPGYPPGYQFWPGSGFPSPAPDLYASHMMRRLREEAPPPANGSFLEGIIRSSLERPGAALLLGGNRRADPCGEPPARRPRLEDHALAADLRETVQRLRADKLRPRNGTPTPPPDA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01078995;
- 90% Identity
- -
- 80% Identity
- -