Eame002027.1
Basic Information
- Insect
- Eumacrocentrus americanus
- Gene Symbol
- nfxl1
- Assembly
- GCA_018902335.1
- Location
- JABSMT010002757.1:576-3196[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 1.1 9.9e+03 -3.2 1.1 15 19 125 129 124 129 0.81 2 20 0.085 7.9e+02 0.3 0.5 4 10 160 166 159 166 0.95 3 20 1.1e-08 0.0001 22.3 14.6 1 19 174 191 174 191 0.99 4 20 0.2 1.9e+03 -0.9 0.9 1 8 217 223 217 224 0.82 5 20 4.1e-07 0.0039 17.2 15.5 4 19 230 245 228 245 0.94 6 20 0.93 8.7e+03 -3.0 1.4 9 13 251 255 250 256 0.77 7 20 1.7 1.6e+04 -3.9 1.4 6 10 270 274 269 274 0.83 8 20 0.61 5.7e+03 -2.5 10.4 3 19 282 299 280 299 0.90 9 20 6.4e-06 0.06 13.5 12.2 1 18 335 352 335 353 0.97 10 20 0.0034 32 4.7 8.0 1 12 387 398 387 398 0.94 11 20 1.1 1.1e+04 -3.3 1.4 6 10 408 412 407 412 0.88 12 20 2.6e-07 0.0024 17.9 15.8 1 19 418 436 418 436 0.93 13 20 0.93 8.7e+03 -3.0 0.4 6 10 465 469 464 469 0.91 14 20 0.0011 11 6.2 8.5 9 18 484 493 482 494 0.91 15 20 0.00036 3.4 7.8 7.2 1 12 504 514 504 514 0.95 16 20 1.9 1.8e+04 -4.0 3.6 14 18 546 550 546 551 0.88 17 20 1.6 1.5e+04 -3.8 0.6 9 12 568 571 568 571 0.77 18 20 0.0047 44 4.3 7.9 1 12 587 598 577 598 0.86 19 20 4e-05 0.38 10.9 15.3 4 19 625 640 623 640 0.94 20 20 4.4e-06 0.041 14.0 11.1 1 16 685 699 685 705 0.86
Sequence Information
- Coding Sequence
- ATGAAGAAGTTTAAACGAGCTCAAGCTCAGAATCAAGCGTCAATTGAGAGGCATCTAGACAAAAAGATATTGGAGTCTTCTAGTGATGAAGAAAGCGAAGCAACGAATGAAGTTTTACAACAGGCAGTCAACAAAACATTGTCTTCTTATCATTATGAAGGTGGAGACTCGGAAAAAGCTTTATCTTACTTGACAGACATCTTTCAGTCTGGAGGAGCTGTCTGTCTCATCTGTATCTCTTCAGTAAAGAAGCCAGATGCAATATGGAGTTGCTCAACGTGCTATTCCTTCATGCATTTGACCTGTATTCAACACTGGATCCGAGATAGTTTGACTTACAAGCACGAAAAGGGCATAAATCCACTCTGGGCCTGTCCAAAATGTCGTACAGACTACACAGAAGACGAGGTTCCCAAGGACTACAAATGTTTCTGCTTGAAATCAATAAATCCCCCCTATCAACCCTGGTCTATCCCTCATTCATGTGGAGAACCATGTTCCAAGCCTCTCCAACCGTCTTGTGGCCACTACTGCATCCTACTCTGTCACCCAGGGCCCTGTCCACCTTGTCCCAAGATGGTGAGCACATCATGCTACTGCTCAAAGTCTCCGGCCCAGCCAAGACGTTGCAATGCCAAGGAATGGAGCTGTGGTCATCCTTGCTTAAAGCCACTACCATACTGCGATCACAAATGCTCCGAAAACTGTCATTCAGGCCCTTGTCCCCCTTGCTCAGCTTCAGTCCTGGCCCCATGTCACTGTGGTGCTGAAAAATCCCTCAAGAAATGCAACGAATCCTATTGGCAGTGCTCTAAACCCTGCAACACACGTTTTCCTTGCAAGGTCCACTCATGCTCTGGCTTCTGTCATCTTCCTGAAGACTGTGGTGACTGTCCTCTGGCTAAGAATCGAACGTGCCCCTGTGGCAAGAAGAAATACAACGTCTCCTGCAAGCAACAGAGCATTCCCACGTGTGGAGACACGTGTAACAAGCTTCTAGACTGTGGCAGACACAAATGCAACATGCGTTGTCACCCAGATAACTGTGGGCAGTGTCTTGAAGTCGTCACTAAGTCCTGTCGCTGCGGAAGCTACACAAAAGAGCTCACCTGTGCCAAGGACTTCCATTGCACCAAGAAATGCACACAAATACGTCTGTGTGGTCGACATCCGTGCAACAAAAAATGCTGTGACTGTCTGCTGACAAACAGCTCGAATCCCTGCGAAAAAACGTGTGACAATACGTTGAATTGTCGAAAGCACAAGTGCCCAGCGCCTTGCCACAGTGGACCTTGCTATCCCTGTCCCAGGACAATTGTCATTCAGTGTCGTTGTGGTGGTAGCAAGATAACAGTGCCCTGTGGCACGACAAAACGAATAAAACCACCACACTGCAATCGTCTCTGCAAGATCCCTCCAGTCTGTCATCATCCTAAACGAGAATCCCACAAATGTCATCAAGGACTATGTCCCCCCTGTGGGAAAGTGTGTGGCCTGGTGCGCAAGAAGTGTGGCCACACTTGTCCAGTAGTTTGTCATACGAAAATCTGGGTGAAGGTGCAGATTAATGGGACTGTAGGACCACCTCAAGGTCCCTGGGACACTCCAAAAGAAACTATGAAGCAAAAGACACTGCCCTGCTCGCCCTGCGAGGTCTCCGTGATGGTCACGTGCCTTGGAGGCCATGAAACAAGGCCCTGGCCATGCCACAAGGCCATTCCCACCTCTTGTCTACGCCCCTGTGGCCAGAAACTCACCTGCGACAATCATAGCTGCGAATTGCTTTGTCATAAACTGACAAATGAGAATAATGAAGCTCTGTGCGAGGATTGTGAGCTTCCCTGTGCGTTAGAGAGGCCGAAAGGATGCCCGCATGCATGTGAAAAAATCTGTCATCCAGCTCCTTGTCCTCCTTGCAGACAAATTGTCAGGGTCTCTTGTCACTGCGGGATTAATACGCTCTACAAGAGGTGCTTTGAGATGACCAGGGCCACGAAGGAGGAGAAGGACGAGATCTTGAAGTGTGGGAATCAGTGTCCAAGGAATTATTCCTGTGGACATCGATGCATTGATGATTGTCATCCTGGTCCCTGTCGTAGCAGTGAGAGTTGTAATAAAAGGATGAAAGTCGGCTGTGAGTGTCAGAGGATAAAGAAGAATTTCCTGTGCACAGATGTGCAGAAGGGAAAGGTGAAGGTTCTGTGTGATGAGCAGTGTCTTCAGTTGAAGATAGAGAGGGAACAACTGAGGCAGGCTGAGTTGGGGAAGAAGAGAAGAGAAGAGGAGATCCGAAACCAGAGGGAAATTGAGAAGTTTGAGAGGAAGTTTAAGCCACGACGAAAGGGAAAGGATAGGTTGGAGAACAATGATGATGCTGAAAGGAAGAAAAAATCGTTTTTCATGAAAGCCTTCATTTTTGGGGCTCTATGCAGTATCATTGTGGCTATTACTTTTTATATTACTGATAGTGGGCTTTAG
- Protein Sequence
- MKKFKRAQAQNQASIERHLDKKILESSSDEESEATNEVLQQAVNKTLSSYHYEGGDSEKALSYLTDIFQSGGAVCLICISSVKKPDAIWSCSTCYSFMHLTCIQHWIRDSLTYKHEKGINPLWACPKCRTDYTEDEVPKDYKCFCLKSINPPYQPWSIPHSCGEPCSKPLQPSCGHYCILLCHPGPCPPCPKMVSTSCYCSKSPAQPRRCNAKEWSCGHPCLKPLPYCDHKCSENCHSGPCPPCSASVLAPCHCGAEKSLKKCNESYWQCSKPCNTRFPCKVHSCSGFCHLPEDCGDCPLAKNRTCPCGKKKYNVSCKQQSIPTCGDTCNKLLDCGRHKCNMRCHPDNCGQCLEVVTKSCRCGSYTKELTCAKDFHCTKKCTQIRLCGRHPCNKKCCDCLLTNSSNPCEKTCDNTLNCRKHKCPAPCHSGPCYPCPRTIVIQCRCGGSKITVPCGTTKRIKPPHCNRLCKIPPVCHHPKRESHKCHQGLCPPCGKVCGLVRKKCGHTCPVVCHTKIWVKVQINGTVGPPQGPWDTPKETMKQKTLPCSPCEVSVMVTCLGGHETRPWPCHKAIPTSCLRPCGQKLTCDNHSCELLCHKLTNENNEALCEDCELPCALERPKGCPHACEKICHPAPCPPCRQIVRVSCHCGINTLYKRCFEMTRATKEEKDEILKCGNQCPRNYSCGHRCIDDCHPGPCRSSESCNKRMKVGCECQRIKKNFLCTDVQKGKVKVLCDEQCLQLKIEREQLRQAELGKKRREEEIRNQREIEKFERKFKPRRKGKDRLENNDDAERKKKSFFMKAFIFGALCSIIVAITFYITDSGL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -