Basic Information

Insect: Eumacrocentrus americanus
Gene Symbol: -
Assembly: GCA_018902335.1
Location: JABSMT010004980.1:1-5666[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 21 0.019 1.7 9.3 0.1 2 20 155 173 154 175 0.92

2 21 0.0002 0.018 15.5 1.1 3 23 183 204 181 204 0.96

3 21 0.01 0.95 10.1 3.7 1 23 214 237 214 237 0.93

4 21 0.15 13 6.5 1.3 5 23 561 580 560 580 0.91

5 21 0.0099 0.91 10.2 0.1 2 23 587 608 586 608 0.94

6 21 0.79 72 4.2 0.3 2 19 636 653 635 656 0.79

7 21 4.5 4.1e+02 1.8 1.9 1 19 750 768 750 771 0.82

8 21 0.00022 0.02 15.4 1.4 3 23 780 801 779 801 0.96

9 21 0.0047 0.43 11.2 6.4 1 23 808 833 808 833 0.93

10 21 2 1.8e+02 2.9 0.3 2 19 854 871 853 871 0.94

11 21 6.1 5.6e+02 1.4 0.2 1 10 881 890 881 891 0.93

12 21 0.0013 0.12 12.9 5.6 1 23 915 938 915 938 0.96

13 21 0.028 2.5 8.8 0.0 2 20 964 982 963 984 0.91

14 21 0.059 5.4 7.7 1.8 1 23 991 1014 991 1014 0.97

15 21 0.0024 0.22 12.1 0.9 1 21 1111 1131 1111 1132 0.94

16 21 3.3 3e+02 2.2 1.3 2 21 1211 1230 1210 1231 0.93

17 21 0.00099 0.091 13.3 2.4 1 23 1238 1260 1238 1260 0.96

18 21 0.86 79 4.1 1.2 3 21 1275 1293 1275 1296 0.84

19 21 0.0041 0.38 11.4 0.4 3 23 1403 1423 1402 1423 0.98

20 21 0.075 6.9 7.4 0.2 2 23 1487 1509 1486 1509 0.94

21 21 0.0055 0.5 11.0 2.1 3 23 1555 1576 1554 1576 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	21	0.019	1.7	9.3	0.1	2	20	155	173	154	175	0.92
2	21	0.0002	0.018	15.5	1.1	3	23	183	204	181	204	0.96
3	21	0.01	0.95	10.1	3.7	1	23	214	237	214	237	0.93
4	21	0.15	13	6.5	1.3	5	23	561	580	560	580	0.91
5	21	0.0099	0.91	10.2	0.1	2	23	587	608	586	608	0.94
6	21	0.79	72	4.2	0.3	2	19	636	653	635	656	0.79
7	21	4.5	4.1e+02	1.8	1.9	1	19	750	768	750	771	0.82
8	21	0.00022	0.02	15.4	1.4	3	23	780	801	779	801	0.96
9	21	0.0047	0.43	11.2	6.4	1	23	808	833	808	833	0.93
10	21	2	1.8e+02	2.9	0.3	2	19	854	871	853	871	0.94
11	21	6.1	5.6e+02	1.4	0.2	1	10	881	890	881	891	0.93
12	21	0.0013	0.12	12.9	5.6	1	23	915	938	915	938	0.96
13	21	0.028	2.5	8.8	0.0	2	20	964	982	963	984	0.91
14	21	0.059	5.4	7.7	1.8	1	23	991	1014	991	1014	0.97
15	21	0.0024	0.22	12.1	0.9	1	21	1111	1131	1111	1132	0.94
16	21	3.3	3e+02	2.2	1.3	2	21	1211	1230	1210	1231	0.93
17	21	0.00099	0.091	13.3	2.4	1	23	1238	1260	1238	1260	0.96
18	21	0.86	79	4.1	1.2	3	21	1275	1293	1275	1296	0.84
19	21	0.0041	0.38	11.4	0.4	3	23	1403	1423	1402	1423	0.98
20	21	0.075	6.9	7.4	0.2	2	23	1487	1509	1486	1509	0.94
21	21	0.0055	0.5	11.0	2.1	3	23	1555	1576	1554	1576	0.96

Sequence Information

Coding Sequence: ATGGCTCGCGTTTTGGTTTACGATGGCTTATCAACTGTAATTCCAATATTTGATTCGACAACACCTGATGATTTGAATGCCCTGCGATTGGATATAAAAATAAAGGAAGAAGTTGTGGAAGATCCTGAAAGCTACAATGACGAGCATTTACCTTCAAATGAGCCTGAGGCAAGCTGTCCAGAAGGAATCCCGGCTGAGAAACTTGAAACAATTGTGCAGAGGGAAAATGAAGTCATTCAACGTACTAAAACTAGTACAGGAAGATGGGCTGAAGGTTCGTCAACAGCACGTATTACCAGATCAAGTAATAAAAATTGTAACAGAGATACTGGTCAGGTTAATATTTTTAGTAGTAGTAATAGTCAATCGACTGTTGAGGTAGGGCTGGATCAAGGTCATACAGAAGATGCCACTGAATTCAGTGATATTAGAACGCGCACGCGTACTCACTCCAGTCTCATAGAGTGTGATATTTGTTATATAACTTTGTCGGATGAAACGAATTTAAAAAGACACAAGAGTCGTATGAACCGAAAAGGTATGAATTGTCATGTGTGTAATAGAAATTTTGCTAATCCCATACAATTAGCGTCTCATCGCCGGTCAAGTCATCGTGGCATTGATTGGATTCGTCATAAATATAAATGTGATTATTGTAATCTCGGTTTTAAGAAAAAGAATTTGGTCCAGCAACATATATTTCATCAACATAATTTAAATGAAATTCCTGTGGGCAATCGGCGTCGTTACAGCAAGAAAAATAGGCATTCAACGAGTCATAAAAACCCATTACGTTTATCTAGTAAGAGCAAATCGAAGAAAAGAAAAGTCGAAGAACTTCTCGACAGTCAAACGTCCAATGAGTTGACTGCAAATAAGAGGCAAAAGCAGATCAATACAGATGTATTAGAGAAAGACCCGTTGCTGGATAACAACGACCTCGATGAGACCTTCACACAGAATGGACAGGAGACAACAGACGTCGTTACTCATCTAGGACAACCAAATGAAGATCACGTACAGGCAGTAAGCACTCCATTGAAGCCACAACCACCGCTGGTAAAAATTTTTGCCATCCCCTATGAAGTAGAAACTTTATTAAATAACTATGAACAATGTCCAAAGAAGAAGGTCATTGAATACTTAGATTCAGATGAGTCTACAGATGATGAGACTACAGATGACGGCACGAGAAAGGAATATATTCTTCGTTCTGGTCTAAGGTCAGCTGATTTAAGATGGATGCGTCCGTCCGGTGGTTCGCCAACTCGGTCAACTATTCGACAATGGGCAGTACTGCGACGGCGTTTTAAATGTCAAGATTGTCATGTTCGATTAGAGAGGATCGATATCCCAGCAGACCATGCACCAACTGAAGAATTCGGAGATACAGACGATCTCGAAGAAAATTCACAAAATAATGTATCGGAATCTAATAATACAGAAGCATCTGATCCTATTCAAATTGACTGTAGACGGACTGTTGGCATAGAGTTGCAAAATCTTGATTTAGCCTTGCAAAAATTGGAGCACTGTCAGAAAGGCGACAGCAACCTAATTGTTGATGAGAATATTAAAGAAGAAATTACCGAACCAGGTAATACAGAAAATACAGGATCTTCCGAGCAACCTCAAGAACCTCTGTCCCCAAAGAAAACTAAAATAATCTATAGGTCAAGTATCTGCAGAACTCGATTCACGACACAAAAGAAATTGGTCCACCACTATCTGGCTTACCACACTGGACCAACTCGTCAAGAATGTCCTGTTTGTAGATCGCCGTTTTCCGGTTCAACAGAATTGAGGAAACATCTAGTACTCCATTGCATTGCTATTCCCAAATCAGACCAAGAAGAGACACCAATTAATCTGAAAGGACCTTGCGAGAGGTACAAGAAGAAATTAACATGTGACGGTTGCAAAAAGACATTTTGGTTCATGCCGAGTCTAGTGAAACATAAACAATATTGTAGTCAACTACATCCAGCAAAGGGGAGGCAGCCATCGAGTAACGATCATCAAGATACTAATAGTCAAACTTCGACAAATTCGGCTGAAAACGATATCCCATCCCAGCAATCAAGGCTCAAGATATTACCTACCGAAGATGATAATAACACTGGACTTCTGCAAAATCACAGTGACAATACACTCGTAGCCAAACATAAATCACCAGAAAAAAATTCTTCCCCGGGTTATTCCTCAGGACTTTCTAACCAACGGCAAAATAATGAATCGAGCACCAGTTTTCCTTGCACAATATGCCGTACTCAATTTAAGGCATTTGAGAATCTTTCATGTCATGAACGCAAGTTTCTCCTGCAACAGAGTGTTGATTGCACGAAATGTGGCACACGCTTCCCTTCATTATCACTATTCCACGCTCACATGAGAGCTACCCACGTAACAGAGCCAGCGTTTTATAAATGTCATTGTTTAGTTTGCAATCAAGGATTTAGTTCGAAGGACTATTTGCGTCAACATACAATGCATATCCATGTGGAAGAATTGCGAAGATTAACTGAAGACCCCTCGCAGCCACAATACAGCATTGAGATGGAATGTCGTAAGTGCAACGCGATTTTTCAAAATCGCAAACAATTCCTCGAACATTGTTTGTATTATTATGATGATGAGACTTTTGCTTGCGCTATGTGCGATAAAAAATTTCTCGGTCGATTTAGAGCGCATTGTCATACGAAGAAGGTACATTTTACAGAGGACAAGCAGAAAGCTTATGAACATCGTTGCAGCGAGTGTGATGAAGGCTTTATTTATGAATCACACTTGCATTCACATATTCGTCATGTACATCCAACTCACGCCAGCCCTACGAAACATATGTCGACTGATGAAGAAACAAATGAAAACGGCTTTGAGCCATCAATTGAATGCAACGTTTGCAATGAACAATTCACCACGCTGGATCTCTTAGACGAACATGAGAAGGAATATTCCAATACTGGCAAGTATAAATGTGCTCTGTGTCAACGAAGATGTTACTCATCTCTATTGCTCTTGACTCACGTAAAAATCGAACACTCTTTTGTATGTTCTGAGAATCAGAGGGAATGCCACCATTGCCACACTCACGTGCCATTAGAGTCGTGGATTGCACACATGAAGCATTTCCACGCCAATTCATTGCAGCACTCGGATATTACTAGTACATCTCTGAATGGGAAGATAAATAAATACGATGATTCGTCTAATTCTCCTCATCTGGATGCTGATTCGTCACAATCACTTGGATTTGACAAGGGAAGTGACTTGCTGACTGCGACAGAAAATGAACTTGATCCTCGCTCAGCTAATCAATATAATATTGAATACACTTGTGCCCTTTGTGATATGAAATTTATATCCCGAACTGCGTTGAGACATCATAGAAGTAAAAATGAATGCACTGGCGTTGGATACATTGCACCAACTTTTGTCGATACAGATGAAACTGCTGACGTGGATGTGGAGTCCAATGGAATAGATGTAATGATCTCTAATATCTATTCCGTTGACTTGGAGGAATATGAGAATTTACATAACTCTGATAACGATGACAGTATAAATGATACTGAAACCTCGATTAATAACACTGCAGAAGATACAAATACGTCTAGCGTCAGTAGTTTGACATGTGATGTATGTTTAACAGAACACTCAACTCATAAAGCTCTGCGTAAACATCAAAGAGACTATTCAAATACTGGAATTCACGTATGTGGTTTGTGTGACAGAAAATTTGCATCGAAAAAATTATTCGAAAGACATGAAAGCAAACATAAAAATAGAAAAGCCGAAGGTGGAACAATTCCTCCACACTGGTGTGAAATATGTGATGAAAGATTCGCCACGTCAATTTCAAGACATGTGCATTTCGCCCATATCCATCAACTACTACTCCCTATGCCAAATGAGCAGGAACAGCATCCTCCTTCCGCTTCGTCTCATTCATCAGATGAACAACGAATAACACGTCAACAATCACGTTTGGTGACTTCTCTCTCGAAAAATTCTCCATTCAATATAGACTCGAACGAGGACCCCCTTGTTGAGGACCCATTGTCTACACACGCTCAAGGAGAACGTATTCCCCAAGATCATGATGTAGAATCTCAAAATGATACACAGGAAATTCTGACATTGTCAGATTCAGAGTCAGAGGAATCATCGGAAGAGTCAGAAAGCCATGACATGTCGCCAGTGCTTTGTGATGTCTGTGGACTTGTATTTCAAAATAAAACCATCTTAAAGGCTCATCAAAAACGTCATTCTAATGTCCCGGTCGCTTCAAACGAACAAAAGAAAGACTATGTAGAAGTAGACCTAACGAAAGATGAGGATAACAAGTCAATAAACGATTACAACAATCGGTTAATACTTAAGAAGGCTAAGTTGTATAATGAAAAATTACTGCAGGATGCCGTGTCTGTCACGATCGACCACAATTACACTCAGGTTCAATGTAGAATATGTATGGAGCAATTTCGCAACATGGAGTTGTTAACAAATCATTTGAATGAGATTCATAGGCTCGGGCTTACAGACATAAGTCATAGAGTAGACACTCTTCGAAATCATTTTGCGTGTGATCCAATTATTCTCCGAAAAAAACAAACATCTAATCGAAAAGAATTGTCAAATTCAACTAATCCACAGCGTTGCTGTAAAATCTGTGGGATGCAATTTAAAAATGAGATTCTTTTAGAGATGCATAAGAGAAATTATCACTATAATACTAGATATGCATCCGAAATACCAAATAGAAATAGGTCCTCCAATCAAATGCCTCATGTGGCGCAAAAATTTTCGACTCTGGGAATGATAACGAATGCGGATAATACTCGTAAGAATTTACAAATGAATGGAACTATCGTTTTCGGTTCACCACAAGTAACTGGGATTGATAAAACGGGTGATGGTCGAAGAAATAATGATAATATTGTTTTAACAAACATACCACTTAATACAGACACAGGAATAATCAATGTAATCGGTCAGGATTCCCCACAATTGTATCAACTGATCCCAATCCCAG
Protein Sequence: MARVLVYDGLSTVIPIFDSTTPDDLNALRLDIKIKEEVVEDPESYNDEHLPSNEPEASCPEGIPAEKLETIVQRENEVIQRTKTSTGRWAEGSSTARITRSSNKNCNRDTGQVNIFSSSNSQSTVEVGLDQGHTEDATEFSDIRTRTRTHSSLIECDICYITLSDETNLKRHKSRMNRKGMNCHVCNRNFANPIQLASHRRSSHRGIDWIRHKYKCDYCNLGFKKKNLVQQHIFHQHNLNEIPVGNRRRYSKKNRHSTSHKNPLRLSSKSKSKKRKVEELLDSQTSNELTANKRQKQINTDVLEKDPLLDNNDLDETFTQNGQETTDVVTHLGQPNEDHVQAVSTPLKPQPPLVKIFAIPYEVETLLNNYEQCPKKKVIEYLDSDESTDDETTDDGTRKEYILRSGLRSADLRWMRPSGGSPTRSTIRQWAVLRRRFKCQDCHVRLERIDIPADHAPTEEFGDTDDLEENSQNNVSESNNTEASDPIQIDCRRTVGIELQNLDLALQKLEHCQKGDSNLIVDENIKEEITEPGNTENTGSSEQPQEPLSPKKTKIIYRSSICRTRFTTQKKLVHHYLAYHTGPTRQECPVCRSPFSGSTELRKHLVLHCIAIPKSDQEETPINLKGPCERYKKKLTCDGCKKTFWFMPSLVKHKQYCSQLHPAKGRQPSSNDHQDTNSQTSTNSAENDIPSQQSRLKILPTEDDNNTGLLQNHSDNTLVAKHKSPEKNSSPGYSSGLSNQRQNNESSTSFPCTICRTQFKAFENLSCHERKFLLQQSVDCTKCGTRFPSLSLFHAHMRATHVTEPAFYKCHCLVCNQGFSSKDYLRQHTMHIHVEELRRLTEDPSQPQYSIEMECRKCNAIFQNRKQFLEHCLYYYDDETFACAMCDKKFLGRFRAHCHTKKVHFTEDKQKAYEHRCSECDEGFIYESHLHSHIRHVHPTHASPTKHMSTDEETNENGFEPSIECNVCNEQFTTLDLLDEHEKEYSNTGKYKCALCQRRCYSSLLLLTHVKIEHSFVCSENQRECHHCHTHVPLESWIAHMKHFHANSLQHSDITSTSLNGKINKYDDSSNSPHLDADSSQSLGFDKGSDLLTATENELDPRSANQYNIEYTCALCDMKFISRTALRHHRSKNECTGVGYIAPTFVDTDETADVDVESNGIDVMISNIYSVDLEEYENLHNSDNDDSINDTETSINNTAEDTNTSSVSSLTCDVCLTEHSTHKALRKHQRDYSNTGIHVCGLCDRKFASKKLFERHESKHKNRKAEGGTIPPHWCEICDERFATSISRHVHFAHIHQLLLPMPNEQEQHPPSASSHSSDEQRITRQQSRLVTSLSKNSPFNIDSNEDPLVEDPLSTHAQGERIPQDHDVESQNDTQEILTLSDSESEESSEESESHDMSPVLCDVCGLVFQNKTILKAHQKRHSNVPVASNEQKKDYVEVDLTKDEDNKSINDYNNRLILKKAKLYNEKLLQDAVSVTIDHNYTQVQCRICMEQFRNMELLTNHLNEIHRLGLTDISHRVDTLRNHFACDPIILRKKQTSNRKELSNSTNPQRCCKICGMQFKNEILLEMHKRNYHYNTRYASEIPNRNRSSNQMPHVAQKFSTLGMITNADNTRKNLQMNGTIVFGSPQVTGIDKTGDGRRNNDNIVLTNIPLNTDTGIINVIGQDSPQLYQLIPIP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -