Basic Information

Insect: Eumacrocentrus americanus
Gene Symbol: -
Assembly: GCA_018902335.1
Location: JABSMT010051682.1:165-9446[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 7.6 7e+02 1.1 1.2 2 22 13 33 12 33 0.89

2 18 4.4 4e+02 1.8 0.4 3 23 345 367 345 367 0.86

3 18 0.67 62 4.4 0.8 2 23 430 450 429 450 0.94

4 18 1.1 1e+02 3.7 2.8 1 23 482 506 482 506 0.92

5 18 0.011 1 10.0 0.8 2 19 563 580 562 586 0.87

6 18 0.00061 0.056 14.0 1.9 3 23 602 623 600 623 0.96

7 18 0.29 27 5.5 0.4 1 23 636 660 636 660 0.92

8 18 0.46 42 4.9 1.1 5 21 680 696 679 697 0.91

9 18 0.027 2.5 8.8 0.2 1 21 707 727 707 728 0.94

10 18 1.4 1.3e+02 3.4 0.2 2 23 750 771 750 771 0.94

11 18 2.2e-05 0.002 18.5 2.3 3 23 793 812 791 812 0.97

12 18 0.00023 0.021 15.3 1.9 1 20 818 837 818 839 0.94

13 18 3.7e-06 0.00034 20.9 0.9 1 23 864 886 864 886 0.98

14 18 0.047 4.3 8.0 0.0 1 23 891 916 891 916 0.93

15 18 0.00032 0.03 14.9 2.5 1 23 925 947 925 947 0.98

16 18 0.031 2.8 8.6 3.6 2 23 957 980 956 980 0.94

17 18 0.0011 0.1 13.1 0.9 1 21 986 1006 986 1011 0.94

18 18 0.99 91 3.9 3.2 1 23 1017 1041 1017 1041 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	7.6	7e+02	1.1	1.2	2	22	13	33	12	33	0.89
2	18	4.4	4e+02	1.8	0.4	3	23	345	367	345	367	0.86
3	18	0.67	62	4.4	0.8	2	23	430	450	429	450	0.94
4	18	1.1	1e+02	3.7	2.8	1	23	482	506	482	506	0.92
5	18	0.011	1	10.0	0.8	2	19	563	580	562	586	0.87
6	18	0.00061	0.056	14.0	1.9	3	23	602	623	600	623	0.96
7	18	0.29	27	5.5	0.4	1	23	636	660	636	660	0.92
8	18	0.46	42	4.9	1.1	5	21	680	696	679	697	0.91
9	18	0.027	2.5	8.8	0.2	1	21	707	727	707	728	0.94
10	18	1.4	1.3e+02	3.4	0.2	2	23	750	771	750	771	0.94
11	18	2.2e-05	0.002	18.5	2.3	3	23	793	812	791	812	0.97
12	18	0.00023	0.021	15.3	1.9	1	20	818	837	818	839	0.94
13	18	3.7e-06	0.00034	20.9	0.9	1	23	864	886	864	886	0.98
14	18	0.047	4.3	8.0	0.0	1	23	891	916	891	916	0.93
15	18	0.00032	0.03	14.9	2.5	1	23	925	947	925	947	0.98
16	18	0.031	2.8	8.6	3.6	2	23	957	980	956	980	0.94
17	18	0.0011	0.1	13.1	0.9	1	21	986	1006	986	1011	0.94
18	18	0.99	91	3.9	3.2	1	23	1017	1041	1017	1041	0.94

Sequence Information

Coding Sequence: ATGGAGACTAATTATGAAGTGGACGATGATACACATTACTGTATTAAATGTCACCTGACTGTGAATGGACTGGACAATTATGTGCGTCACCGGCAAACAGGATGTCGTCCATCAGAGGCAAAGAGGACACTGACGCCGGATCCACCAACACCGGCTGTGTCCTATCCGGAAATCCTCAATGCTGATGCATTCTTCAGCTCATTGGAGCTACAGAGCAGTGCAAAGTCCAAGTCCCGTGGTACACCCGCACTCTTGGAGCAAGAAAAAAAATCTGGGAGATCGGGGGAAAAACGTAGAAGGTCCAGAAGGTATCAAGAGATCGATGTGCCAAGTCCAAGAGATAAACTGATTACACTTCCACCAGTTGTTACTGATTTGGATGACCCCACTGATCATATTGGCATTCCATCTCTTGTTGGTTTCCCTGATATAGTAACTTTCACAGAGAAATCATCAACCGCGAAGCTCCAACCGCTAACAATCTCCAAACCCATTCAATGTGAGAAAAAACCCAATGAAGATGATCGAGAATGGCTAAACGATGACCTGGAAGATTCAGATGGGAATAAGGCCGGTGGTACAGATGCTGGTGATGGATCAGACAGTGATACAGACTATGACTATCAGCATGACGATGGATCAGACATTGAGAGTCCGGTGGAAGATATTGGCCAAGATTCGTACACTGATACCGATGATCCTGACGACCGGGAGTATCCTCCTCAAGCTCACATTGGAGGGAAGTGGAAGCCCGATCAACTTCTTCACGACATAGTACGACATCACGATGATGAGCTTGATCAAGAGGAACTCGATCATCACAGCAGTCACATACCCGCACACAGTGGTGGAAAGTGGAAACCAGCAGAGCAGAAAACCGAGGAGGATGAACCAGCAGAGGATGAGAAGGAAGACGATGATAGGGACAGTGTGGTGACAAGAAACTCTAGGCAGCCACCACCAGGTCACACTCGTGGGAAATGGATCCCGGGGACTTCAACTGTACCGTCGGAAGTTGGATCGGGCTATTGGTGCAGTCCTTGCGGTCGGAAGCTCGCCTCCAAATTGGTTTACAACAGACATTTACGCTCCGATTTGCACGCTCGACGTTGCATCCAGGAGATTGAGGGAGATGTGAAACTGCCACGATCTGTTGGACCACTTTTGCGGAAAAAATTCCGCAGCAAGCGTCAGAAAACGCTCGAAATGAAGCGTACAGAGATCAAGAAGACAATCAAGAAGCATAATCCAACAAAGAAGACACGACACAGGGAGAAGGAGGTTCTTCAGTGCGAAATGTGTCATGCCCGCGTGCGTCGTCCTCAGCTGGGCAAACACCTGCTCTCGCACTACCACTGTCGTGTCGCAGGATTAAATCCCTACAGTCCTACCGCGCGACGCTTTATCCTGGAGAACATGGGCAACGTGGTCCGCCAATGCCCATTCCAGTGCTCAGGTTGTCGCTTTTATTGCAACACAGAGGAGACTTTCTTGCTTCACTGGCGCTCTAGTCTTCATGCTAACACTTGGAAAGACGACAAGAGTTACTACATATGTGCATGTTGCAACTTCTTGTGTGACAGCGACGCTATCATGGAGCAGCATCTGTTGAGTTTGGAACATCGTGAGACAATTGCTGTGATCAGCGGTTCAGTGCCGATAGTTATACGCAGACAACGTGTCTTATCGTGCAAAACCTGTGGTCGTCGCTTCAGATACAATGTCCAGCTTCGATTCCATGCTAAGGATACTGGACATTCTCAAAGCTGGACAGCGACTGACGATTATCAACAAAAAATTTTCTGCAACCTCTGTCCCAAAGTTCTAAGATCCCAACTGTCGTTGCAACGCCATCAATTGACTTGTCATAAGTCTGGAGATTCAAAGGACAAAATTTCAGCGCCGTACTTCTGTTCCTTCTGCTCGATCAACTTTGAGACTGCTTGGGACGCCGTGCTCCACCGAAGAACGACGAGTCACAAACAGACCGTCAAGGAGCACAAGTTTGGGTCAGATGAAGTATCTTCTTTGCGAAGGGACTGTGGTCACTGCGGAGAGAACCAGAGCAACTTGACCGAGCACAAACAGCATCTACTCCAACGTCATCCTGATCTCTGTCACAAATGTCTGACTTGTGGTGAGATTTTTCCTCTTTCGCAAGACGTTACTCGACACACGAAAATTGGCGAGTGTCAGAAAAAAAATGAAGCCGTAAATAACCAGTTCTTAAGCAATCAAGACAAGAGAAGATGCACCCAATGTTCATTCATGACGGCATCTCAAGCAGAACTTATCTTCCATCAAGCTATTCATGCTGGCAGTATTGAACATGATCCCAAAATGCCCAGTTCCAGCAAGACTTCCGTTAAGTATGGCTGTCCCATTTGTGACAAGACATTCAGCAAGAAATCTCTGCGACATCACATTCGACAACACACAGGGGAAAAGCCCTTTTCCTGTTCCAAATGCCTCAAATGCTTCGCACGAAGATCTACCTTGACTGCTCATGCAAATCAGTGTTATTCGTCATGTGCGTTTAAAGAAAAAGGACCAGAAGTGCAGTCCAATGAAAAGATTCGTCGACGAAACTACATCTGCTTAGAATGCAATACGGGTTTCTATACAAAAGACAATTTGAGACAACACATGCTCCGACACGTTGGGAAGAGTTACAAGTGCGGACTTCCGGGTTGCCCAACCATTCTCCGAACCGAAACCGAACTTAAAGCCCATCGAGCTCTTATCCACGAGAGTGGAGCCACCGACCGCCAATTCCAGTGCAACGAGTGTTCCTATGCTGCAAAAACCAAAACCCAACTTCGTCGTCATTACACTCGACACAAGAGTCTCACAAGCGAGACACAACTGTCATGTCCTCACAAAGATTGTAGCTTTGTAACAAAATTGGGTTCACATTTAAAGAGACATATGCGTTTGCATACTGGGATCAAGCCGTACAAATGTCCACACTGTTCATATGCGAGCAACAATATCGAGAATCTGAGAAAACACGTTCTATCAACGGGATTTCATCCCAGCAAGATGATCTACGAGTGTGATAAATGCAAATGCTATAGCACAAATTTTTCCAAGGAACTCCGTGCTCATTTGATGGAAAAACACTCTAAGGAATTTCCTACACCGAGTCATGCCACCAGTTATGTGGCTGGAATCCTCGGCAGCGATGGACACACCACTCAACCTGAGTGA
Protein Sequence: METNYEVDDDTHYCIKCHLTVNGLDNYVRHRQTGCRPSEAKRTLTPDPPTPAVSYPEILNADAFFSSLELQSSAKSKSRGTPALLEQEKKSGRSGEKRRRSRRYQEIDVPSPRDKLITLPPVVTDLDDPTDHIGIPSLVGFPDIVTFTEKSSTAKLQPLTISKPIQCEKKPNEDDREWLNDDLEDSDGNKAGGTDAGDGSDSDTDYDYQHDDGSDIESPVEDIGQDSYTDTDDPDDREYPPQAHIGGKWKPDQLLHDIVRHHDDELDQEELDHHSSHIPAHSGGKWKPAEQKTEEDEPAEDEKEDDDRDSVVTRNSRQPPPGHTRGKWIPGTSTVPSEVGSGYWCSPCGRKLASKLVYNRHLRSDLHARRCIQEIEGDVKLPRSVGPLLRKKFRSKRQKTLEMKRTEIKKTIKKHNPTKKTRHREKEVLQCEMCHARVRRPQLGKHLLSHYHCRVAGLNPYSPTARRFILENMGNVVRQCPFQCSGCRFYCNTEETFLLHWRSSLHANTWKDDKSYYICACCNFLCDSDAIMEQHLLSLEHRETIAVISGSVPIVIRRQRVLSCKTCGRRFRYNVQLRFHAKDTGHSQSWTATDDYQQKIFCNLCPKVLRSQLSLQRHQLTCHKSGDSKDKISAPYFCSFCSINFETAWDAVLHRRTTSHKQTVKEHKFGSDEVSSLRRDCGHCGENQSNLTEHKQHLLQRHPDLCHKCLTCGEIFPLSQDVTRHTKIGECQKKNEAVNNQFLSNQDKRRCTQCSFMTASQAELIFHQAIHAGSIEHDPKMPSSSKTSVKYGCPICDKTFSKKSLRHHIRQHTGEKPFSCSKCLKCFARRSTLTAHANQCYSSCAFKEKGPEVQSNEKIRRRNYICLECNTGFYTKDNLRQHMLRHVGKSYKCGLPGCPTILRTETELKAHRALIHESGATDRQFQCNECSYAAKTKTQLRRHYTRHKSLTSETQLSCPHKDCSFVTKLGSHLKRHMRLHTGIKPYKCPHCSYASNNIENLRKHVLSTGFHPSKMIYECDKCKCYSTNFSKELRAHLMEKHSKEFPTPSHATSYVAGILGSDGHTTQPE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -