Basic Information

Insect: Eumacrocentrus americanus
Gene Symbol: -
Assembly: GCA_018902335.1
Location: JABSMT010034684.1:395-2413[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.00082 0.076 13.6 0.3 2 23 126 147 125 147 0.96

2 11 0.019 1.7 9.3 3.1 2 21 213 232 212 234 0.89

3 11 3.8e-05 0.0035 17.8 3.5 1 23 362 384 362 384 0.97

4 11 7.9e-07 7.3e-05 23.1 1.9 1 23 390 412 390 412 0.98

5 11 5e-06 0.00046 20.5 0.7 1 23 418 440 418 440 0.98

6 11 2.6e-05 0.0023 18.3 3.3 1 23 456 478 456 478 0.97

7 11 2.2e-08 2e-06 28.0 2.7 1 23 484 506 484 506 0.98

8 11 3.4e-06 0.00031 21.1 5.3 1 23 512 534 512 534 0.98

9 11 6.4e-07 5.9e-05 23.4 1.7 1 23 540 562 540 562 0.94

10 11 9.3e-05 0.0086 16.6 6.4 1 23 568 590 568 590 0.96

11 11 4.2e-06 0.00039 20.8 2.8 1 23 596 618 596 618 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.00082	0.076	13.6	0.3	2	23	126	147	125	147	0.96
2	11	0.019	1.7	9.3	3.1	2	21	213	232	212	234	0.89
3	11	3.8e-05	0.0035	17.8	3.5	1	23	362	384	362	384	0.97
4	11	7.9e-07	7.3e-05	23.1	1.9	1	23	390	412	390	412	0.98
5	11	5e-06	0.00046	20.5	0.7	1	23	418	440	418	440	0.98
6	11	2.6e-05	0.0023	18.3	3.3	1	23	456	478	456	478	0.97
7	11	2.2e-08	2e-06	28.0	2.7	1	23	484	506	484	506	0.98
8	11	3.4e-06	0.00031	21.1	5.3	1	23	512	534	512	534	0.98
9	11	6.4e-07	5.9e-05	23.4	1.7	1	23	540	562	540	562	0.94
10	11	9.3e-05	0.0086	16.6	6.4	1	23	568	590	568	590	0.96
11	11	4.2e-06	0.00039	20.8	2.8	1	23	596	618	596	618	0.99

Sequence Information

Coding Sequence: ATGTTTATTGTCACTAAACAAATAGATAGTGATAATATAAGTAAGCTATGTCGTACTTGCTTGAGAGAAGATGGTGAAAAGATGATTTGCCTGTTTGTTGGTCCTGCATGCTCTTCTCTAGCTGCAAAATTAAGATCTCTGTCATGTTTAGAGGTGTGGCAAGGTGATGGACTTCCAGAAAAGCTGTGTGATCGTTGTGTAACACGAGCTGAGTCTGCCCTATTGTTTAGAGAGCAATGTCGAGCAGCAGATAGAGCACTGAGACAAGCAGCTTTAAAAGTTTCTGGCTTGACTACTTACACAACTGTCTCTGGATGTAAATTGTATCAACAAAATCGAGGCTTCACTCCCATTCAAAACTCACAGAAGACTTTAAAATGTGGAGAATGTGGAGCAGTGTTTATGGACTACCAGGAACTCTGTGCACACAGTCGTCTTCATGCTCCATTCATTCAAGAATCATCCTCTTTGCAGCACATGCATATTGTCGAATCTCAAAACACATATTTCCAACCTGATCCTTCTATAACTGAATCAGTAATCGAGGATGATCACAATGGTTCTGTCGAACATCTGGCAAGACCTGGAATAATGCCAGAGTTATCACAAAAAAATGATAGGCCAGCTTGTGCACTGCATTGCTCACTTTGCAATCATACCTTTCCAAATAGAACCCAACTGATCAGCCACAATTTTGCTCACTGTACGGACAGTGTCGAGATGTCCTGTGACAATGACAGCATTGAAATTGGCGAAGATTCGAATGAAATGGCACAGAATTTGAGCTTTCAAAGAGCAGTTGATATTTCATATCCAAGGTCTAATTCAAATCGAGAAACAATTCCCAATATGACATTTTCAGAGAATTTAACTCTTGCTGCAACAGCTGAAGCTGAGACGAATGGTATCATAAGAAGAGATATAAGTGCAGAGACTGATGGGATCGCTAATGATGAAATTCTTCGATTCCCAAGGTTCGTAGAGGACGTGCCGGAGACCTTAAACGATGATGAACAAACTATGTCCAGTAATGGTAACTATAAAGTACAAACTAGTCCTAAAGATTGTCTGCTACAGAAGAAACACAAGTGTGAAACTTGTGGAAAACTTTTTGCTCAAAAATCAAAACTCACGACGCACAAATTGTCTCATACTGGTGAGAGACCATTTAAGTGTCGAAATTGCGAGAAAGCTTACACTTCCAAAAGCAAACTGAATGCACACATGAGATTACACACGAGAACGAGTATTCACCAGTGTGATATCTGTGAAAAAATGTTTTCTTATCCGTCTTATTTATTGGAGCATGCAAAAGTACATCAATCAAAATCACTCGAAGTAGATATGTCAGTAAAAGTTAAAAAATTCGAATGTTCTACGTGTAACAAGAAATTTAGATTAAAAAAAAATCTCAGGGCACACGTAAAATTCCACAGTGGAACAGGCTTGTTTCATTGTGAGATATGTGATAAACCTTTTAGCCAAAAGTACAATCTCAAAGTTCACCTGAGAACACACAATGGTACGAAGCTTCATAAATGTGAATACTGTGATAAATGTTTCACTGAAAAAGGAAACTATACAGAACATCTGAGGATTCATACTAAAGTCAAACCATTTATCTGTAAATTGTGTGGTAAAGCTTTCTCCCAATCTAGTCATTTGAAGAATCACGAGGTCTCACACAATTCACTTCGACCACATCAATGTCGATTGTGTGGTAAACGTTTCAAACTATCATCGCACCTCAAGAGACACTCGAATTTACATACAGCAATTAAAACCTTTAAATGCATGCAATGCGATCAAATGTTTTCCCAAGCATTCAGTCTTAAAAGACACTTAAAAAGACATAATGATGCTAATGCATAG
Protein Sequence: MFIVTKQIDSDNISKLCRTCLREDGEKMICLFVGPACSSLAAKLRSLSCLEVWQGDGLPEKLCDRCVTRAESALLFREQCRAADRALRQAALKVSGLTTYTTVSGCKLYQQNRGFTPIQNSQKTLKCGECGAVFMDYQELCAHSRLHAPFIQESSSLQHMHIVESQNTYFQPDPSITESVIEDDHNGSVEHLARPGIMPELSQKNDRPACALHCSLCNHTFPNRTQLISHNFAHCTDSVEMSCDNDSIEIGEDSNEMAQNLSFQRAVDISYPRSNSNRETIPNMTFSENLTLAATAEAETNGIIRRDISAETDGIANDEILRFPRFVEDVPETLNDDEQTMSSNGNYKVQTSPKDCLLQKKHKCETCGKLFAQKSKLTTHKLSHTGERPFKCRNCEKAYTSKSKLNAHMRLHTRTSIHQCDICEKMFSYPSYLLEHAKVHQSKSLEVDMSVKVKKFECSTCNKKFRLKKNLRAHVKFHSGTGLFHCEICDKPFSQKYNLKVHLRTHNGTKLHKCEYCDKCFTEKGNYTEHLRIHTKVKPFICKLCGKAFSQSSHLKNHEVSHNSLRPHQCRLCGKRFKLSSHLKRHSNLHTAIKTFKCMQCDQMFSQAFSLKRHLKRHNDANA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -