Eame015780.1
Basic Information
- Insect
- Eumacrocentrus americanus
- Gene Symbol
- -
- Assembly
- GCA_018902335.1
- Location
- JABSMT010006531.1:1860-8543[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 30 6e-06 0.00055 20.3 1.0 1 23 213 235 213 235 0.98 2 30 0.0026 0.24 12.0 1.9 1 23 258 281 258 281 0.96 3 30 0.00022 0.02 15.4 1.0 2 23 288 310 287 310 0.96 4 30 0.00021 0.019 15.4 0.5 1 21 330 350 330 351 0.95 5 30 0.019 1.8 9.3 0.2 3 23 452 472 450 472 0.93 6 30 0.014 1.3 9.7 0.3 1 23 478 501 478 501 0.91 7 30 0.00011 0.01 16.3 0.1 1 23 573 596 573 596 0.96 8 30 0.007 0.64 10.7 0.5 1 23 602 625 602 625 0.96 9 30 0.14 13 6.5 1.9 1 23 638 660 638 660 0.97 10 30 3.9e-05 0.0036 17.7 1.1 3 23 705 726 704 726 0.96 11 30 0.64 59 4.5 0.5 2 23 788 811 787 811 0.93 12 30 3 2.8e+02 2.4 0.0 2 23 820 842 820 842 0.84 13 30 0.056 5.2 7.8 0.0 2 23 849 871 848 871 0.96 14 30 1.2e-05 0.0011 19.3 1.2 1 23 879 901 879 901 0.98 15 30 0.052 4.8 7.9 0.4 3 23 933 955 931 955 0.84 16 30 0.0002 0.019 15.5 3.3 1 23 958 981 958 981 0.97 17 30 0.0048 0.44 11.2 0.5 2 23 988 1010 987 1010 0.95 18 30 0.0035 0.32 11.6 4.9 1 21 1037 1057 1037 1058 0.95 19 30 0.0026 0.24 12.0 1.8 2 23 1072 1093 1071 1094 0.93 20 30 0.13 12 6.7 1.1 1 23 1097 1120 1097 1120 0.95 21 30 0.016 1.5 9.5 3.0 2 23 1127 1150 1126 1150 0.93 22 30 0.93 85 4.0 0.2 2 23 1158 1180 1158 1180 0.95 23 30 0.22 20 6.0 2.7 2 23 1218 1240 1218 1240 0.96 24 30 1.2 1.1e+02 3.6 0.9 2 23 1246 1268 1246 1268 0.92 25 30 0.0017 0.16 12.6 0.1 1 23 1330 1353 1330 1353 0.97 26 30 0.0012 0.11 13.0 3.1 1 21 1379 1399 1379 1400 0.95 27 30 0.48 44 4.9 1.3 2 23 1501 1523 1500 1523 0.94 28 30 0.2 18 6.1 1.3 2 23 1530 1552 1529 1552 0.94 29 30 0.67 61 4.4 2.5 1 23 1563 1585 1563 1585 0.97 30 30 3 2.7e+02 2.4 0.1 3 20 1594 1611 1594 1613 0.94
Sequence Information
- Coding Sequence
- ATGAAAGTCTCCAAGTTGAGTCACATGAAAGAAAAGAAAGAGATGATGAAGATTCTCATAGAGATTTTTGATGCTGTAGCAGCAGCAGGAGACAAGTTTAAAGACTTGATGCTTATTGCCGAGGACGATCGACTGCCCAAGTGTTTGTGCTACAGATGCATGTACAATCTTGAGAACTTCTACGACTTCAGAACAGCTTGCGTCAATGCCGTTGCACTACTTGAGAGATCTCTACCACCAAAAAATACTTCAAATGGCGAAATTCAAAGCGACATGGAGAAACACTCGGAATTACGGTCCGAACTACTCAAGGAAAAGGAAAAAATGCCTATCCTTATACCTGAGGCCCCAATAGTGAACCCAAACGCGGCCCTGGGGACTCCACCGCGATTGAATTCAGATGGCGAAGCGGACCAAGAGATCGAGGAAATTCTTGAACAAAGTGGCACCGATGAAGGAATGGACGACCCAGAAGACAGAAAGTCCGACGAATATGAGATGGACATGGAGACAAATCCAAGTGACTTCTTGGAAATGCCTCCAATGGTAACCGAAGAGGAAACTGATCCAAGGAGTCAACAAATGAATTCACAGTCTACAGGAGTCTTCCAACACACATCAGAGCAGCACGAGGTGTACGTATGCTCTTTGTGCAACAAGGCCTTCAGCTCAAAGGGACACTTGTCTCTTCATGCACGAATCCACGTGGGCGCTGGTGACGTGATCGGCGAGAAAGTCATCACAGACGACCACACGTCATACAAGCGTCCTTATCAGTGTGATTTGTGCAACAAGTCGTATTCAACTGCGAAGCACAGATGGGGCCACGTCTCCACGACACACAGAGGACACCCAGCAGTAACTTGTAGATATTGCTCTAGGATTTACTCGACTCGAACGAACCTCGAAGAGCATATTAAATCGAGGCACACTGGTCTGCCTCCACCACCAGAGGTTCCTGTATCTTATGTCCAGCAAGAGAATCGTTACCAGTGCAAGACATGTCCCAAGATGTACACAAACGTGACAGACTTGAACAAACATAGTCGAATATGCTTGGGAGATCGTTCCAAAGATTCTGCTCGTGGAACCATCGTTCAATCAATCAGGGCCAAGGGAAAAAGCCTGATGGACACGTCAGAGGCATCTAGTATCGATTCCGAGGATGAGAGCAAGGATTATCGAAATGCTGAGGCTAAACTCTCAAAAAATCCGCAGCTAACGATCCTAAAACAAGCTTTGACCAGAGGAGAAGGATTGAAACGTGATTCTGAGGGCAGAAATTTGTCCTACAAGTCTCTGAGGGGGCCTCAGAGTGAAAATGTCGACAGCGAGGGTCAAAAGAGATGGTTCTGCGAGACGTGCCCTCAATCCTTTAATTCAGTGGAGACTCTGAAAGAGCACGAAGTGAGTCACGATGCAGACAAGCCTTATATCTGTATTCTCTGCGAGAAAGACTTTGTCTTGAAGTCTTCTTTGAGCAGGCACATCTTGTCGTCGCATGGAGTTGACCCAGTTCCAATAGTCGACAGCGATAAGTGCCTCAAGAAGACAGTGATGGCGCAGATGAATGCAAAGCACACGTCAAGGGTCGAGGAACTCAAGAGCAAGAGGGAATCGTCAGAGTCGTCGTTCTCTCCAGAGCCACACGCCGATCAGGATGAAGACGATCGTGACAGTGGCGGGCAGGAGAATATGATCGAGATCGAGACAGTATTCGTTTGTGAGATCTGCACACGTGACTTCAATGATCGAGCATCGCTGTGGCTGCACATTCGTGCAACTCACAAGGAATTCGCTGCATTTGCGTGTGGAGTCTGTCTAAAAATTTGCTCTGACAACGAGCAGCTCCTAAATCACGTGAATATGTACCATGGGGGCTCGAAGCTCTTAGTGTCTGAGCAGAGGAGATATAGCTGTACAATCTGTGGAAGACAGCACGACTCAAGGAAGAAATTGATGACCCATGTGTCAATTCACAATGTGGATCCAAGCTACGATCCTGCCGGCTTTGTGCAGCTCAACAGTAATTTTTACAACGAAAATCTCAACAGCAACGAGGAACATGATCAAGGAGTAGATTTTGACGCTGAAGATGGTGAGAAAGTCGATTGCTTCATCTGCTACAAGTCATTTCCGAATGAAGACCACTTGATTCGTCACCAAAGAAATGCTCACAAGTCGGAGCCAATGGCACTGGGTGGTGAAGTGAGCAACCCCAATGGCACAGGAGCAAATCCCAATGGCAATAAAGCTCAGTATCATCTTTTCTTTGTTTGTGAACTATGTGGAAGCTCCCATCCAAGCAAATGGGAACGGTGGCTGCACGTGAGCAGTGTTCATGGAGACGAGTCACTGATTAGGTGTGAGAGAGAGGACTGTGCAAAGATATTTGCCACCAAGGCCCTGAAAAACGAGCATGTCCAACATCACATGATCCAAGGAGCGTCACCAAACACCTGTGAGATCTGTGGCAAACTCTGGGGCAGTCGAGTTGACTACTGGAAGCACGTAATGGGTGTGCATTCCGACACAGTGCCTCTAATCTGTGGCGTTTGCCTGAAGGTCTTCCCTGACGTTATCCAGCTCAGTGGGCACGTGAGGACCAAGCATTGGCCTTTGACCAATGGCGACTTTAGCTGCGATATCTGCGGACGTCCGTACTCGAATAAATCGAAAATGTCGAGACACAGAAAGATTCATGGTCTGGAGATTGAAGGATACAACAACGGCATGAATGACTCGATGAACGAGACAGTGAACTTTGAGCCAAATGCAGCAGAGATTGATTTGAACTGTGAAATGTGTGCAGATGCGACGTTTTCCAGTTGGGAGGAACTCTGCCAGCACAGACGAATGGTTCATGGCCTGTTTCCCTGCGATCTCTGTAACAAATGCTATGGCAGGACTTCACACCTGTGGAAGCACGTTAACAGAGTTCATAAAGGACACAAAGACGTTACTTGTAAGTATTGCATGAAGACGAGTGCGTCCAAGGATCACTTGGCAGCACACATTGCGAAGATTCATCGATACGAGCCTGACACGAAGCAAGCGATGAAAGACAGTGTAAGTCATAAGTCTGTAAACATTGAAGAGGACGTGATTCATTACTGTCAGAAGTGTAAAAAAGGTTTTCACAAACGCTATCTCCTTCGTCGTCACATGAAAGGCTGCCAGAACTACAGGAAGGATCCAGGAGCTCTTCTGACACGATGCAGGGCATGTGAGAGGATCTTTAAGGATCGAGCCAGCCTGCAAAAACACATTGAGAATCATCACAGTAGCTACACGTGTCACCTGTGCAACGAAACGGTCACTTCCAAACTTGGCATCATGACTCACAACCGTGTGAATCACATGGACCATCCAGACCTTACGTGTGACCACAGCAACTGTAAAAAGCTGTTTAGAACGAAGGAGGACTTGGAGTCACACAGGAAGGATCATAAATATCACAATAGTCCAAATGTTTGCGATTTTTGTGGCGACACTGTGGACAATAAACTCAAGCTAAAGATGCACATTCTCTCTCTGCATCGAAATGAGATTGGAGTGAGCTGTGGAGTGTGCCTGATCCCTATGAAAGACCCTCAGGAATTGAAGAATCACGTTGAAGACGTTCATCCAGGGGTTTTGCTCAAGCCCAATACTTGCCAAGTCTGTGGGAAACAGTATGCCTCTAAGTGGAAGGCTTTTGACCACACGAAGAAGTGCCATGGGAAGGTATTCAGGACCTGCAAACAATGTCTGGCAGTGTTCACAACAGACTCAGACATAAGATATCACTACGAGCATATTCACAATGTCCCTAAGGATCAGTTGGCTGGATTCGAAAACCATTTGGACTTATCTGGAAAGAGTGACGATCACGATCATGCAGGTGTGGCGATAAAGGAAGAGCCTGAGGACTTGGAGTACGACGATGGCCTCTACGACGATATTCCCCATGTGAAGGATTCTAAACGAAAACGACCACATGACACTTACGACTGTGAGATCTGCCCAGAGATATTTTTGAATAACGATACACTGTCCCAGCACTACAGAACTATTCACAATACTGATCCTGACAGAATGTTCAAGAAATCAAAGACAAGCAATGCAAAGAAAAAAATGAAAAATCGAGATAACTTTGAGTGTAAAAATTGTAAAAAGCAATTTTGCACAAAGACACTGTTCTGGAATCATATCAACGTTTGCCCACGTAGAAATGCAATGAGGAATGTTTCGTCACCGAGTTTTACAGGCTCAATTCTTGAGTCTCACCTGAAAAATAACAATCAGATAAAAAAAGAGCCACTGGAGCCAGTCCTCAATGAATCCAACCTGAATATCCCGGACTTTAATCTCTTTGAAGATATTAACATGCAGCTTTCTGGACAGAAGCCAGTACCAAACTTGATGCCTCTGTCTCACGTGAAAATGTCGCAGAGCAACATGAAATGTTACAGAAAAGATTCACGAAAGGTTTACGACGAGTCAACGAATACCGTCTGTGCTTGCGAGGTTTGTGGCAAACAATGGCCAGCGAAGAAGCATCTTTGGCAGCATTTAATCAGATTCCATCGTGCTGAGGCGGCAGTGACCTGTGGTGTCTGTCTGAAGCTCTGCACCACGTACAGGAACCTTTCACAACACTTGAAGGACGCCCACGAGGCAATTTTGTCATGCGAGGGCAACAATTTCACTTGCAAGACCTGTGGAAGATATCACAATGCTCGAAGCAAGCTTCTGCTCCATATGAGCATTCATATCAATAATAACGAGCACATATGGTGTCAAAAGTGTGCAGCAAACTTTGACAGCGAGGAAAAACTTCAACAGCATGTTGCCAAATGTATCGCGAAGAGAAAAGCTCATGAAACAGAGTTTGAAGAGCAAAGCATAGACCTCGAAGACGTGAAAATGGAAGGTGAAGAGGACAAAGGTAGTCTCATTGGCGACAGTGCTTCATTGCTTGGAGAAGGAGATGAAGAGGTTGACTTTGACTCTGAGGTTGAGGAGGAGGCATCAGAAAATGGGGAAGAAAACAGTCAGTCAGAAAATTCTGAAGACTCAGACAGCAGTGCTGATGGAAGTGGAAGCGAGGCAGAGCACGACGAAGACAATGAAATGGAATCTAGAACTAACAGCAGAATAACTGGAGACGTAAGCTGTCAGACAGACACTGAAGATCACGATTCTGAAGAGTCTGAAGGTGAAATCGAGGACGTTCAGGAAAGAATAGAGAAGTCCAGACGAGTAAGTGAATCAAGTGAGAGCAAGAAGAGTCACGACAAAGAATCACTGAAAGATGAAAATAATGGCAATTCAAGCGAAAATGTAGAGGAAAAAGACGTTGAGAAAGAGATATCAGTGGCTGTTGAGAGTGCACAAAAGACAAAAGATGAACGAAAGGAGGATGTAGAAGATTCTGATTACGATGGACCACCAATTTTGAGCCCTATGATGCCTCTTCCTGCCAATAACGAGGGCGACGAGAGAGATTACAGTCCTGAGGCCACTGAAAGCCACAAACTGAGTCCCGTGGCATCACCGAGTCCTAAAAAAGAACTCGAAGAAGAGATTCCTGAGCTGGATGGCATTGAGAATACAGAGAAAGAGGGCTTGTCAACAAATTCGAATACTGTCGACTACGACGAGAATTCGTCCACTGCTAAATCGAATACGAGTGTCGTAGCATCAATGGAAGACGTTGAATCAGAAGCTGAAGAAGAAAGAGACGAAAATATGGAGGATGATGACAGTAGACTGCACATAGAACAATCTGCGACGAATTCGGAGATAGGCAAGGCATCCGAGCAGGAGGAAAACACGAGAGATGACGACGATATTGTGGAAGATGTGTTTGAGGAGGAAGTCGAAGCTGACGAGAGTGACATGCAGATTGATGACTTGGATGGCACTGTCTTGATGGTGGCTAACGACGCAGAAGGAAATCAAATATTAATTCAACGTAATGTTGCTGAGATGAGCAATGAAGAAGAATCAATGGAAGGTGTGACAAGTTATATCTATCAGGATGAGGAGGAGAATTACGAGGATGAAGAATACAGGGAACAAGACGAAGAAAATCAAGAGGACGATGAGGAGGTTGACGACAAAGACGATCAAGAGATGGGGATTCACAGTGAGGTGGAGGATGAGAGGAAGGGTGAGGGGGACAACGACGATGTGGAGGCTAATTCGGGTGCCAAAAACAATGTGTCAAGGACGTAG
- Protein Sequence
- MKVSKLSHMKEKKEMMKILIEIFDAVAAAGDKFKDLMLIAEDDRLPKCLCYRCMYNLENFYDFRTACVNAVALLERSLPPKNTSNGEIQSDMEKHSELRSELLKEKEKMPILIPEAPIVNPNAALGTPPRLNSDGEADQEIEEILEQSGTDEGMDDPEDRKSDEYEMDMETNPSDFLEMPPMVTEEETDPRSQQMNSQSTGVFQHTSEQHEVYVCSLCNKAFSSKGHLSLHARIHVGAGDVIGEKVITDDHTSYKRPYQCDLCNKSYSTAKHRWGHVSTTHRGHPAVTCRYCSRIYSTRTNLEEHIKSRHTGLPPPPEVPVSYVQQENRYQCKTCPKMYTNVTDLNKHSRICLGDRSKDSARGTIVQSIRAKGKSLMDTSEASSIDSEDESKDYRNAEAKLSKNPQLTILKQALTRGEGLKRDSEGRNLSYKSLRGPQSENVDSEGQKRWFCETCPQSFNSVETLKEHEVSHDADKPYICILCEKDFVLKSSLSRHILSSHGVDPVPIVDSDKCLKKTVMAQMNAKHTSRVEELKSKRESSESSFSPEPHADQDEDDRDSGGQENMIEIETVFVCEICTRDFNDRASLWLHIRATHKEFAAFACGVCLKICSDNEQLLNHVNMYHGGSKLLVSEQRRYSCTICGRQHDSRKKLMTHVSIHNVDPSYDPAGFVQLNSNFYNENLNSNEEHDQGVDFDAEDGEKVDCFICYKSFPNEDHLIRHQRNAHKSEPMALGGEVSNPNGTGANPNGNKAQYHLFFVCELCGSSHPSKWERWLHVSSVHGDESLIRCEREDCAKIFATKALKNEHVQHHMIQGASPNTCEICGKLWGSRVDYWKHVMGVHSDTVPLICGVCLKVFPDVIQLSGHVRTKHWPLTNGDFSCDICGRPYSNKSKMSRHRKIHGLEIEGYNNGMNDSMNETVNFEPNAAEIDLNCEMCADATFSSWEELCQHRRMVHGLFPCDLCNKCYGRTSHLWKHVNRVHKGHKDVTCKYCMKTSASKDHLAAHIAKIHRYEPDTKQAMKDSVSHKSVNIEEDVIHYCQKCKKGFHKRYLLRRHMKGCQNYRKDPGALLTRCRACERIFKDRASLQKHIENHHSSYTCHLCNETVTSKLGIMTHNRVNHMDHPDLTCDHSNCKKLFRTKEDLESHRKDHKYHNSPNVCDFCGDTVDNKLKLKMHILSLHRNEIGVSCGVCLIPMKDPQELKNHVEDVHPGVLLKPNTCQVCGKQYASKWKAFDHTKKCHGKVFRTCKQCLAVFTTDSDIRYHYEHIHNVPKDQLAGFENHLDLSGKSDDHDHAGVAIKEEPEDLEYDDGLYDDIPHVKDSKRKRPHDTYDCEICPEIFLNNDTLSQHYRTIHNTDPDRMFKKSKTSNAKKKMKNRDNFECKNCKKQFCTKTLFWNHINVCPRRNAMRNVSSPSFTGSILESHLKNNNQIKKEPLEPVLNESNLNIPDFNLFEDINMQLSGQKPVPNLMPLSHVKMSQSNMKCYRKDSRKVYDESTNTVCACEVCGKQWPAKKHLWQHLIRFHRAEAAVTCGVCLKLCTTYRNLSQHLKDAHEAILSCEGNNFTCKTCGRYHNARSKLLLHMSIHINNNEHIWCQKCAANFDSEEKLQQHVAKCIAKRKAHETEFEEQSIDLEDVKMEGEEDKGSLIGDSASLLGEGDEEVDFDSEVEEEASENGEENSQSENSEDSDSSADGSGSEAEHDEDNEMESRTNSRITGDVSCQTDTEDHDSEESEGEIEDVQERIEKSRRVSESSESKKSHDKESLKDENNGNSSENVEEKDVEKEISVAVESAQKTKDERKEDVEDSDYDGPPILSPMMPLPANNEGDERDYSPEATESHKLSPVASPSPKKELEEEIPELDGIENTEKEGLSTNSNTVDYDENSSTAKSNTSVVASMEDVESEAEEERDENMEDDDSRLHIEQSATNSEIGKASEQEENTRDDDDIVEDVFEEEVEADESDMQIDDLDGTVLMVANDAEGNQILIQRNVAEMSNEEESMEGVTSYIYQDEEENYEDEEYREQDEENQEDDEEVDDKDDQEMGIHSEVEDERKGEGDNDDVEANSGAKNNVSRT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -