Eame010216.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Eumacrocentrus americanus
Gene Symbol
ZFY
Assembly
GCA_018902335.1
Location
JABSMT010030247.1:6492-10783[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 20 7.3e-05 0.0067 16.9 0.3 2 23 16 38 16 38 0.96
2 20 3.8e-05 0.0035 17.8 1.3 1 23 44 66 44 66 0.92
3 20 0.064 5.9 7.6 0.4 1 23 70 92 70 92 0.97
4 20 5.8e-05 0.0053 17.2 1.1 2 23 99 120 98 120 0.96
5 20 0.0003 0.028 14.9 0.0 1 21 126 146 126 147 0.96
6 20 0.001 0.093 13.3 1.3 1 23 215 237 215 237 0.93
7 20 5.3e-07 4.9e-05 23.6 1.2 1 23 243 265 243 265 0.99
8 20 2.2e-06 0.0002 21.7 0.0 1 23 271 293 271 293 0.98
9 20 0.00022 0.02 15.4 2.2 2 23 300 322 299 322 0.95
10 20 2e-05 0.0019 18.6 4.2 1 23 327 349 327 349 0.97
11 20 6.1e-06 0.00056 20.3 1.5 1 23 358 380 358 380 0.98
12 20 2.9e-06 0.00027 21.3 1.0 1 23 386 408 386 408 0.97
13 20 0.016 1.5 9.5 0.4 1 23 528 550 528 550 0.90
14 20 2.9e-07 2.7e-05 24.4 1.9 2 23 557 578 557 578 0.98
15 20 2.9e-06 0.00027 21.3 4.8 2 23 608 629 607 629 0.96
16 20 0.00027 0.025 15.1 4.8 2 23 635 656 634 656 0.97
17 20 0.00019 0.018 15.6 0.1 1 23 661 683 661 683 0.99
18 20 2.1e-06 0.0002 21.7 0.9 1 23 691 713 691 713 0.98
19 20 0.12 11 6.8 2.6 1 23 719 742 719 742 0.94
20 20 0.00013 0.012 16.1 0.6 2 23 754 775 753 775 0.96

Sequence Information

Coding Sequence
ATGCAGTATCTGAGACACCAGCAAATTCACGAGAGCAAACCTGGCCGTTGTACGCTGTGCGAGGAGAGTTTTCCCGACGAGGAAAAACTTCGCAAGCACATGATCAAGGTACATCAAGCGGACAAACCTTTCCCCTGTATCCTTTGTGATAAATCCTTCAAGACTCAAGAGTATTTGAGGACTCATTTGAAGCAGCACAACAAACGTTTTACCTGTGACATCTGTGGGGTATCCAAAGTATCTGGCTATGATCTACGATTACACAAGAAAAAACATAATCAGGAGTACGTGATACACTGTGAAATATGTAACAAGGGCTTTTACACAAATCAAACCTTGGGACGACACATCCTCACCCACACAGGAGAGAAGCCTTTTGTCTGCAAAATCTGTAATACACCATATGCCAGCGCAGCATATCTCAATATGCACATGAAATTGCCGACTATCATCCTATCACATATCAAAGTGGAGGAGTGTATAGACGTCTCAGCGACTATAGTAAGTCGAAGAAAAGTCAAATCCACAGAGGGGCTGGACTCAAGTTACGAGAAAACAGAGTCTCACTCAAGTACAGCCATTATGATTGACGAACAAAACTCAACAAAAATTTCAGAGGGGCAGAAAATTTCAAAAGATATATACAAATGTCAGATGTGCACCAAGCAGTTCAGATCAAAAAATCTTTTCGAGGGACATCTTGTAGCTCACAGTGACGCCCGTCCGTACCAATGTGATATTTGTAACAAATCATTTAAGCGAACAAATACGTTGGCAGTTCATCGAAGGATCCACACACGAGAACGAAATTTTATCTGTGATGTGTGTGGCCGAGCCTTCATTCAAGCTGCCCAATTGGCGATGCATCAACGTCGACATTTTGAAAAGTATATATGTTTCTGCGAAATTTGTGGCAAAGGTTTCTTCACGAATGCTGAGCTGCATGGTCACATGAATATTAAGCACGGCGCAAAGGAACACGTATGCCACTCCTGTGGCAAATCATTTCCAAATAATCACACCCTTGCACGTCATGCAAAGATCCACGATCCAAACTTCAAGCCCATCAAGCATCAGTGTGAATTTTGTGGGAAAGTTTTTGCTTATAAAAATTCCTTAATGGTCCACGTCAAGTCTCACACTGGCGAGAACAAATACGACTGTCATCTGTGCGGGAAATCCGTGTCGTCAAAAGGATCACTGCAGGATCACTTGCGGCTTCACAGCGTATATTCTGAGTTAGAGCCAGACCAACCTCTATTATTAACTTTTCAAGCTACACCTTCCTTCACAGGCAACATACATACTATTCTACGTTCGGGTATTATTGGAGGACGATTAGAACAAACAAAACACATTACTAAATACAGCCAGGTGCCGTACTCCGAAGAGTACTACCCAATGACAATCTCGTCTAAGCAAGACCTGGCGAAGAAAGATGCAGATAAGGCAGAGGTAAAGTCGAAGAGTGATGATACTCCTTCCGTTGAGATTACGATTGTGGATGAGGTGCAAGATAAAACGGCAGAGGTAATTAAAATCGAGATAGACCCCGAGGATGAGGACGATTTACCATTGGCTTATCACTGTAAGCTCTGTGGTGTATTCTTCGCGACCCAGATACTGCTGGACAGTCATGAAGTCGAGCATAAGGGTAAGCGAAAGAACACGTGCGACCAATGCGGCCGAGTATTTCGGACGTATGTCAATCTGCGAAAGCACATGAAGAAGCACCTGGGACGAAAGGCCAGAGCCAGCACAGATGTCACGGTCGCTCAGTCAAGTGTTAAAGTGAAGAAAGAAAAATCTGATATCGAATTGGAATGCAAGACGTGCAACAAGGTCTTTCGTCACAAAAGTAATTATCAGAAGCATCTGTTACGACACACTGCTGGTGATCTGACGTGCAAGCATTGTCCGAAAAAATTTCGTCTTTTTCGAGATCTCACAAGGCATGAGAAAACCCACTTTTTCCCAAGTTATACGTGCAAAGAGTGCGACTACGAGACCACCGTGCTGGCTGCTTTGACTATTCATATGTTGAAGCACTCTGACAAGACAGATCTTCCATTCAAGTGCAACGAGTGCGACAAGCGCTTCAGGAAAGCGATTGACCTGCAGGAACACTACAATATTCATTCTGGTGACAAACCATTTGTATGCCAATTCTGTGGCAATGCGTTCTATCTTCGAAGACAACTTTCGGCGCACTGTCGACGATTGCATCCAGAGGTGAAGGCAAATAAAGTCACCAGCACAACCTGTGACATTTGCGGCCGAGTACTGGCTACAAAACGTTCACTATTCCGGCACAAGGAGAGTCACAATCCCACCAAGCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCATCGTGGATTCTCCTGTCAAGGCAATCTCACGGCCCATCAAAAGTCCACTTGCGTCTAA
Protein Sequence
MQYLRHQQIHESKPGRCTLCEESFPDEEKLRKHMIKVHQADKPFPCILCDKSFKTQEYLRTHLKQHNKRFTCDICGVSKVSGYDLRLHKKKHNQEYVIHCEICNKGFYTNQTLGRHILTHTGEKPFVCKICNTPYASAAYLNMHMKLPTIILSHIKVEECIDVSATIVSRRKVKSTEGLDSSYEKTESHSSTAIMIDEQNSTKISEGQKISKDIYKCQMCTKQFRSKNLFEGHLVAHSDARPYQCDICNKSFKRTNTLAVHRRIHTRERNFICDVCGRAFIQAAQLAMHQRRHFEKYICFCEICGKGFFTNAELHGHMNIKHGAKEHVCHSCGKSFPNNHTLARHAKIHDPNFKPIKHQCEFCGKVFAYKNSLMVHVKSHTGENKYDCHLCGKSVSSKGSLQDHLRLHSVYSELEPDQPLLLTFQATPSFTGNIHTILRSGIIGGRLEQTKHITKYSQVPYSEEYYPMTISSKQDLAKKDADKAEVKSKSDDTPSVEITIVDEVQDKTAEVIKIEIDPEDEDDLPLAYHCKLCGVFFATQILLDSHEVEHKGKRKNTCDQCGRVFRTYVNLRKHMKKHLGRKARASTDVTVAQSSVKVKKEKSDIELECKTCNKVFRHKSNYQKHLLRHTAGDLTCKHCPKKFRLFRDLTRHEKTHFFPSYTCKECDYETTVLAALTIHMLKHSDKTDLPFKCNECDKRFRKAIDLQEHYNIHSGDKPFVCQFCGNAFYLRRQLSAHCRRLHPEVKANKVTSTTCDICGRVLATKRSLFRHKESHNPTKLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHRGFSCQGNLTAHQKSTCV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
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90% Identity
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80% Identity
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