Eame006411.1
Basic Information
- Insect
- Eumacrocentrus americanus
- Gene Symbol
- clz9
- Assembly
- GCA_018902335.1
- Location
- JABSMT010051917.1:1-1576[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.6e-09 1e-06 28.4 0.0 4 39 4 39 3 44 0.93 2 2 6.8 4.2e+03 -2.4 0.0 2 9 56 63 55 66 0.89
Sequence Information
- Coding Sequence
- GTTATGTCGAATCTAGACCAAGCTGTTACTGCAGTGGTGGATGGAGAACTGTCACTCCGGGCCGCAGAGAAGTTGTACAAAGTCCCGTTTTCTACTCTGAGACGTCATGTGACAGGAGAGAGTGCAAGTACAAAAAGAGGACCCAAGGTGAAGTTGGCAGGGCATGAGGAAGAAATGAAAGAAGCTTTGGTTACATTGGTGAATGTCGTTCATGGCTTTACTACGAATAAAGTAAAGGAAATGGCCAGTGGTGTTGCAGCAAAGATTGGAGTGAGTTTTAAGCAGAAATTGCCCTTAAACAAATGGGTCTATGGCTTTATGGGCCGTACAGGCCTTTCTCTGAGACAGTCGGAGAATATCAATTATAAGAGGCTTGATATGGAAACAATAGAAGTTAAGGAAGATTTTTTTCAAAGAGTTAACGGAGTTTATGACCAGCTTCTTCCTAGAGGTTTAGATGGTACGCGAATATGGAATTTAGATGAGACTGGTTTGTGTGTGGTAAGCCAAGCCGGAAAAATCGTAGCCCCCAAAGGAATAAAAGAAGTTCGTGCTCGACAGGGAGGGGACCGAGGTGAAAACGTCACTGTACTAGTTACAGTGAATGCTGCTGGCCAAAGTCTACCTCCCACTATTATCTTTAGAGGCCATACATTGAATGAAGATTTAATGAAGGACGCCACTGAGGGCGCATTTGGAAGATTTTTGCTGACCGTTCCACCAGCTCGACCAGTACTCCTGTTCATGGATGGCCACACATCTCATAATCCAATAGAAATACTCAAGATGGCAAGAGACAATGATATTCATCTCATTTGCCTCCCTCCACATACCACTCACATTTACCAGCCTTTGGATAAACCAGTTTTTGGCCCTTTAAAAAAACATTTTCTGACTGCTGCCTGA
- Protein Sequence
- VMSNLDQAVTAVVDGELSLRAAEKLYKVPFSTLRRHVTGESASTKRGPKVKLAGHEEEMKEALVTLVNVVHGFTTNKVKEMASGVAAKIGVSFKQKLPLNKWVYGFMGRTGLSLRQSENINYKRLDMETIEVKEDFFQRVNGVYDQLLPRGLDGTRIWNLDETGLCVVSQAGKIVAPKGIKEVRARQGGDRGENVTVLVTVNAAGQSLPPTIIFRGHTLNEDLMKDATEGAFGRFLLTVPPARPVLLFMDGHTSHNPIEILKMARDNDIHLICLPPHTTHIYQPLDKPVFGPLKKHFLTAA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -