Eame006733.1
Basic Information
- Insect
- Eumacrocentrus americanus
- Gene Symbol
- -
- Assembly
- GCA_018902335.1
- Location
- JABSMT010055531.1:5724-6959[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.4e-11 2.8e-08 33.4 0.0 3 40 17 53 15 57 0.90 2 2 0.79 4.9e+02 0.6 0.0 23 31 102 110 101 110 0.90
Sequence Information
- Coding Sequence
- ATGCCTCGCAAACGCATTAGAGAGACAAACAAAGGCAAATGGACTCTAGAGAACTTGGAACAAGCTGCATCAGCAGTGCGAGATGGACTGTCCATTCGAAAGGCAGCAAAACAATTCGCTATTCCAACAACTACACTCAGAGATAGATTGCAGAAAGGCACAGCCTTTACTGGACCACGAATGGGACGAAAAGCTGTATTTACTGGTGATCAGGAGAAAGAGTTAGCTGAAATTCTCAAATCAGTTGCTGAACAATTTTGTGGATTGACACGAAAACAAATATGCTCTGCTGCATATGAATTCGCTGAGAAATACAATATTCCACATACATTTAATGGCGAAAAGAAGTGTGCTGGGATCGAATGGTATAGATCATTTATCAAGAGGAATCCATCGATTTCAGTGAAGAAAACTGAGGCAACAACTGCTAATAATTGTTCGCCACCACGAATTACCAAAGACGATGCTGCTGTTTGCTTTGGTGATTTAGAAACTGTAATAGAGAAGCACAAATTCACAGCATCGAGAATTTTTAATGTCGATGAAACAGCCATTGGTGTTGTCAATGGTTGTGCAACTATTACACCTGAAAAAGTACACAAGCAAATTAATTCACAAACAAGAACAATTGGAAATGAAATTAGTAAATATGTATCTGTTGTTTGTGCAATGAATGCTTGTGGAAATTTTATTCCACCGATGTTTATATTTCCTAGGCTAAGAATGTCACCTCTTTTGTCAAATGGTGGCCCACCAGAAGCTATTTATCGATGTTCAAAGGATGGTTTAATTAATGCATCATTATTTCTAGGATGGTTGGAGCATTTTAAGAAACACACTCGGTGTACTAAAGATGATCCGGTACTTCTTGTTCTTGATAATGATGAAAGTCATATTTCTCTGGAGACTCATCAATTTTGTCAAGCTAATGGGATTGTCATGTTCTCATTACCACCGGGTCTAGCTTCATATGATTTACAACCATTGAATGCAAGTTTTTTTGGTCCTTTGAAAATTGAATTTAGTAAGCAATGTGATATGTTCATGCAGAAGAAAGATGTAAACAAAATTACTCTGTATGATTTGGTGGCAATCTTCAATATTGCCTATAGTTCTGTTGGATCTATACAAACTGCAGTATCAGGTTTTACTGTAACGGGAATATACCCGGTAACTCGGGATCGATTCGAAGACGAACAGGATAATCAATTTGTTTCTACACATTTTATGGCTTAA
- Protein Sequence
- MPRKRIRETNKGKWTLENLEQAASAVRDGLSIRKAAKQFAIPTTTLRDRLQKGTAFTGPRMGRKAVFTGDQEKELAEILKSVAEQFCGLTRKQICSAAYEFAEKYNIPHTFNGEKKCAGIEWYRSFIKRNPSISVKKTEATTANNCSPPRITKDDAAVCFGDLETVIEKHKFTASRIFNVDETAIGVVNGCATITPEKVHKQINSQTRTIGNEISKYVSVVCAMNACGNFIPPMFIFPRLRMSPLLSNGGPPEAIYRCSKDGLINASLFLGWLEHFKKHTRCTKDDPVLLVLDNDESHISLETHQFCQANGIVMFSLPPGLASYDLQPLNASFFGPLKIEFSKQCDMFMQKKDVNKITLYDLVAIFNIAYSSVGSIQTAVSGFTVTGIYPVTRDRFEDEQDNQFVSTHFMA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -