Eame002412.1
Basic Information
- Insect
- Eumacrocentrus americanus
- Gene Symbol
- bab1
- Assembly
- GCA_018902335.1
- Location
- JABSMT010033496.1:27-1246[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.2e-07 7.5e-05 22.4 0.0 2 39 203 239 202 244 0.90 2 2 1.6e-11 1e-08 34.8 0.0 5 39 256 289 253 296 0.85
Sequence Information
- Coding Sequence
- ATGTCTGAAGTCAACAGTCAATGTGAAATTGCGTCAACGTGTTATTACTTCAAATGGAACGATTATCACAGTCATTTATCGAGTTTGGCGCAGCAACTTCTCGAGGAAGATTGCATGGTCGACGTCACACTTTCTGTTGCTGGAGAACGTATACATGCTCATCGCATTGTTTTGTGTGCTTGCAGCACATTATTTCAAGAAATCATCAGCGAGACACGTGAAGATCATCCTACTATTATAATCAGTGATATTGCACCTCAAGATGTGAGGTCAATCGTTGAATTTTGTTATCATGGTGAAGTAAGAGTCCCTGTGGACAACATCACCAATCTCCTGGATGCTGCACATTCCCTGAAGATCTGTGGACTGATGGAGGTTGAAGGTCTAGATGAGAATGACAGTGTCAAATGTACAAAAGATGGCTCGGACGATAATCATGCAGATATACAAGAGGATTCGAATGAATCAGGGGATAAAGCTTGGCCAGATATTGTAGATAGAGCTGAAGATTCGGAAGAACATTCGGCGGCAGCTGAGCAGGGAGATGCACCGGTGAAGAAGAAGCGAAAACGTAGACGAGATGGTGGAAAGAAGAAGAATTATAGTGAGGAAATGTTGGCAGCAGCTATAAATGATGTTCGAGCTGGTCAATCGCTTGTAGATGCTGCTACAAAGAATCAAGTACCACGATCGACACTTTATATGCGTGCTAAGGGATTAGGTGTACAGGTGAACGCGGTGAGGAGCGATTATCCTGCTGAATGCCTTAAAGCAGCTATAAATGCTGTTATTAATGGTGCAAGCTTTTCACAAGCATCTGATATGTATCGAATACCGAAAACAGTTCTATGGAGACGAATTCAAAAAGAAGGCTACCAAATACTGCGATCAGAGATGAAAAGATCCTATGATGCTGACAAAAGAGAAGCTGCAGTTAAGGCTCTTGAACGAGGAGAGAAATTAACCAAAGTTGCTCAAGAATATAAAGTTAGTTAA
- Protein Sequence
- MSEVNSQCEIASTCYYFKWNDYHSHLSSLAQQLLEEDCMVDVTLSVAGERIHAHRIVLCACSTLFQEIISETREDHPTIIISDIAPQDVRSIVEFCYHGEVRVPVDNITNLLDAAHSLKICGLMEVEGLDENDSVKCTKDGSDDNHADIQEDSNESGDKAWPDIVDRAEDSEEHSAAAEQGDAPVKKKRKRRRDGGKKKNYSEEMLAAAINDVRAGQSLVDAATKNQVPRSTLYMRAKGLGVQVNAVRSDYPAECLKAAINAVINGASFSQASDMYRIPKTVLWRRIQKEGYQILRSEMKRSYDADKREAAVKALERGEKLTKVAQEYKVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00687314;
- 90% Identity
- iTF_00687314;
- 80% Identity
- iTF_00687314;