Basic Information

Gene Symbol
Jarid2
Assembly
GCA_018902335.1
Location
JABSMT010013970.1:2371-7818[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 3.2e-23 9.9e-20 70.8 0.1 6 89 1328 1409 1324 1409 0.94

Sequence Information

Coding Sequence
ATGGTATTGGGACGAAATGATAAACGAAAGAGGAAGGAAGGTGACTTGGTGGATCTTATGGGTCCACTCTCAGAACCACCTAAAAGAGCAAAAGTTCATGCTCAAAGGAAATTTGCACAAGGAGCGGCAACTGTGTTTAGTTCAACACCAACTCTTGTCAAAGAAAAAGAAAAGCCCAAACCTAGCATGGTCACGGAGTTGATTACACACAAGCGTCCCAACACTGAGGATTTCCTGACCTTTCTTTGCTTCCGAGGAACGTCCATATTGCCACCAAGTCTGAACTTCTTCAACGTTGGATCGAAAAAGGAAAAGTCTGAGTCAAAGTCATCTTCAGCAAAAAAATCAAACAGTAGCAGTAATCAATCTGGTTCTAATAGTACATCTTCTACACCAGGTGTAGTATCAAAATCAGAATCAAATCAGAGTACTGTGCCTAAAGTAAAATCCACTGATGCAGACAAGAAGAAAGTTACAAATGGACTCCAGAAGAGTGTGAGCAAATATAAGACAGCAACTTCAACTATTCAGGCATTGAAAAAGAAGTATCAGGAACAACGACTAGCCAAACAGAGAATCGAGAACAAATTCAAAACTCCTTGTGTAATGAGAACACGTTCAGCAACAGGACGAACCATTTTAAAATCAGCCAGCAAACTAGCTCCAAGAAAATTCCTGCCACGAATCGAACCGAAACGTCACTGTTTGCGCAGTAATACACTTATAGAAAAATCGAGGAAAGTCATCCCTCAAAATAGTAAGATTATTGCTAAATCAAAAAAGAAACCAATAGTCAAAGAGCAGAGCAGCGAATCAAGCTCAGAGTCATCATCAGAAGACGGCAAATCTGATACAAAATCAATACAACAATCCAAGCGATCCATAAAGACTGTTACGAAAAATGTTTGTACAAGTAGTAAATTGGAATCGCGACGAGTCACTCGATCTCACAGTGAAGTTGCTTCAAGTCAAACATCATCTCAACGTCCCTCCAGAAAAACGAAGGAAGCTGCTGCCGTTTACATGGAGATACTCAGTCGGAAATTGGTGAGTCCAGATTTAGAAATCGATGAGAATTTATCGATGGACAGTTATCCTGAATTGCCAAATGCACGAAGAACTACTCAAACTGAGAATGAAATGAAAGCAAAGGTTAAATCGACTGCTAAGATCAATAAGGAGAAGGAAAAAGAGAAGCGTGAAGCATCAGCGGGAAGTAAATTTGCTGATAAGCCAAAATCTGAGAAGATCGTTCTACGAAACAAAAAACCAATAAAACCGCAGAAATATTCTGACAGTGAGGACGAGTCAGTGAGTTCTGCAGAGAGCAACAGAACGAGACCCATGACAAGACGTAGCAGTAGTAGTCAGCCAGTGAAACCTTCCAGTCGAAGTCTTCGATCCTCTGTTCGCAATTCCCCACAAAAACCTGAAGTGCAAAGTGTCGTAAAGTCTGCTCGAGACAACAAGACGTGGACCAAACGAAAACGAGAGCAAATAGCAAACAAATCGTCATTATCAATAGAAAAAACTCCATGTACAACAGAGAAGAGACAGAAAAGTAAAGGAGAATCACAAGAGTCAGAAGATGAATCACTGGGTACTGTCCTCGACAAAATTAAGAAGAAGAGACAATTAATGGCAGCAATAGTAGAGAAAAATTCTCAAGAAAAAGATCTCTCAAAACTCACTGAATTAAAGGAAAAAGTTGATTCTTCAAAAATATCTGATGATGAAGGATCGTTTCGAGGTTTTGCTACAAAAGTGATTTCGAAAGTCTTGAATTCGTCCAGTACTCATGGGAGCGTGAATCTAACAATCTCTGAAGAGGTTCATGCGAAACCAAATGTGCTGAAAATACAAGATACGCTCACGCAAGCGGCCTCACCTCCTAGAGAAATTAAGCATCCAAAGACAGAGTTACTGGGACCATTAATTCCTCCAACAGAGATAATTAAATCAGAGCAAAAGGATTCGTTATCATCGAGTAATGTACAGGTGGGATCTCTGTCATCAAGGCCCAGTCTGTCAGAGTCTGAGAAGAAATGCATTCACATTCCGAGTAACAATAACACTGCCATCGTCGACATTCCACCTGCAGCGTCTCTAGGTCGAAAAGAACGAGTCAATATGTCGACAGAGCAGATAGAAAAATGGCTGAACGAGAGTTCAATGGCCAAAGAGGAGAGCAAAGCTGAAATGGAGACTGTTTCCAACTTCCAATTTGAAGTATCAGAAAAAAATAAATCCGACATGGGCCACATATCTATTCCAACTCGTATCCAGCATCTAGTAAGACCAGTTAATGTGGCAATCGCAAAAATGGCTGAGAAAATAGTTCCAAAGGATCGTCTCGCTAATCAAATGAAACTTGCAATGATTACTGGGACAGGAATAGCAGTAGCAAAAATTCCAACTCCTATCAATCCTATTCCGACAAATAGGAACAAAATTAATGCTGATATAAAAGAGATCATAAAGGGACGGATCGCTAAAGCTGGTCTCGTTTGCATCCCTAACAAAGAAATAATTGGTTGCGAGGACAGTGATGTAAGCTCCAGAGCCGATGGCATGACATCAACAGAGGGATCTCCAGATAAAAAATCAGCTGAGAAGAAACCCATTTTTCAACAACGCAAGACATTTTTACCAAAAGTTAAGGAACGAAAAACAGCAACGCCAAGTGTCAATGCATTCTCACCAGAGAATGAGAGCAGCGTTTATGCATTTGAAAGTGACACCGAGGCGCCTGTAAGCACACCTTTCCGAAGAAAACAACGAGACAGCAAATCTGGTGCGTCTGGATCGTCAGACATGGACTTATCCAGGACAGAAAGTGACGATGGCAATATCAAAACTCCCATCAAAGCTGCTGACAAAGACGAGAAAGAATTATCAAAGTCTAAGAGTGTTGGAACGAGTAGCGAAGAGGTTGAAGCCGAGTCATCAAAACTTGTGACTTCCTCCATTAACACTTCAAATCAATTCAATAAATTTCAGATGCCTGAACGTTTTAGAAATTTGTCGAACGTTCAAGTCCTGCCATTGGGAAAAATTCCAACGATGTGGAACAATCTGAACTGTAGTGCATCTATCGCTGTTCAAGTGAATTTTGACGATCAACCTCAAGATTCCGACGGTCAAGGAATGAGTGAAGACATGGGATTACACAAGAGTACTGAAATATCTACCCAAACTGAGAGCACAAATGAAAACGAGGACGAAAACGATGCACACGTCTTCTACATTCCTCTGCAAACAGTGGCGAGAAATGGTCCAAATTTGGTCCAAGGACAGTCGTTGATCCAGGGAGTAGCAGTGAAGCTGGGCACTGAAGGCCCCAATGGACCGAACCAACGTGTTTTATTGCGTGCTCAGTTGGTTACGAAGCCACCTATGGCCGTCGCACGATGTCCTCCGGTGGGAACCGTTCAGCCAACTACAAGAACTCCGCCAACTATTGGCAGTTCTGACCCAATCCCATCGACATCTCAATCTTCAACATTTTCTTCTCCACCTGAAGTTTCATCAAATTTAAATTCAGAAAGAAACACTGTTAATAAACAACAAGCTAGTGTTAGCACTACTGCAGGTACAGAAAAAAATTCAAAGTCTCCCAAAGTATCTCGAGAGCGAAAAAGCTCAGTCGACACAGCAAAAACAGGTAAAAAAAATCAATCCAAGTCAAAGAAGGGATCTGAACCATTGTCGATCGCCGAGATGACATTCCCAAGCATGGAAGTAAAGGGAGAAGCTCGTTTGGTTGAAGCACCCACGTTTCATCCTTCAGAGAAAGACTTCCAAGATCCTCTGGAATATATCGACAAAATCCGACCGATTGCAGAGAAATATGGCATCTGTAGAGTTGTTCCACCTTCCAACTTCAAGCCTGAGTGTAAAGTGTCAGACGACATGCGATTCACTGCTTACAATCAGTATATTCATCGTATGCTTCATCGATGGGGCCCCAATGTTAAGGAGATGATGGCAATAAAAAAATACTTGGCTACTCAGAGCATCACATTGAATCAACCACCTTGGATAGGAGGTATGGAAGTCGATTTACCGCACTTGTATCAAACTGTCCAGAGTTTGGGTGGTCTAAAGGAAGTTATCGAAAAGAAGAAATGGCAGAAGGTAGCAGATGGCATGAAGATTCCAAAATCGGCACAAGATCGAGTCACCAAATTGGACGATATTTACTGCAAGTATCTTCTGCCCTATGACACCTTATCAACAGATGAACGAGAGAAACTTTTCGAAGATGTAGAGGCCGAGTGGAAGCAACGAGAGAGCAAAGCACTACAACAACTCAGTAGTACACAATCAAGCGATAATGATGACGATGAAGATGAGGACAGTTCAGATGATACAGAAGAGTGTATTGTCAAGGGCAGGAACATGCCTCTCAATGCTTTCTATCGAATTGCTCGCAACACTCAGCGAATGTGGTTCGGTGAGAATCAAAATTCAGCTAGTGAAGCAGAAGGCGCATCAGCAACTGAAGTTGAAAGTGCCTTTTGGAAGCACGTTGCAGAAAGGAAACGTCACGTGTGTGTACATGCAGCCAGCATTGATTCCAGTGGGCGAGGATTTGGTTTCTCTGTAGCAAAAAATAGTCCCTTTGCTCGTCATCCATGGAATCTTAAAGTACTGACAAACAATGCCAGTTCTGTACTTCGTGCTTTGGGGCCTTTAATGGGGGTCACTGTGCCCACACTTCACGTGGGAATGCTGTTCAGCGCCTGTTGCTGGTACAGAGATCCACATGGCCTGCCCTGGATTGAATATCTGCACACTGGTGCAAAGAAAATATGGTATGGCATTCCCAATAAACATAACGACAATTTTAGAGAGGCTCTGTCAAAAATGGTTCCACGCTTCTGCAAGAATAAAACTATTTGGTTGCCCTCTGACACGGCCATGGTGCCCCCAGAGATGTTAGTCAGCAATGGAGTGCCATTGTGCCAAACTGTTCAAGAACCAGGACAATTTATCATCGTGTTCCCCAAGGCTTTTACATCCAGTATCTGCACGGGCTACGTCGTCTCTGAAAGTGTTTATTTTGCTCAGACGACGTGGCTACAACATGCTGAAGAGATATTCAAGGATCTTCAAGACAGTTGTGAACCATCAATGTTCTCTTTCGAGCGACTACTCTTTTGCATTATCAATGATTCCAGATCTCACATTGATGTCTTGAGACAG
Protein Sequence
MVLGRNDKRKRKEGDLVDLMGPLSEPPKRAKVHAQRKFAQGAATVFSSTPTLVKEKEKPKPSMVTELITHKRPNTEDFLTFLCFRGTSILPPSLNFFNVGSKKEKSESKSSSAKKSNSSSNQSGSNSTSSTPGVVSKSESNQSTVPKVKSTDADKKKVTNGLQKSVSKYKTATSTIQALKKKYQEQRLAKQRIENKFKTPCVMRTRSATGRTILKSASKLAPRKFLPRIEPKRHCLRSNTLIEKSRKVIPQNSKIIAKSKKKPIVKEQSSESSSESSSEDGKSDTKSIQQSKRSIKTVTKNVCTSSKLESRRVTRSHSEVASSQTSSQRPSRKTKEAAAVYMEILSRKLVSPDLEIDENLSMDSYPELPNARRTTQTENEMKAKVKSTAKINKEKEKEKREASAGSKFADKPKSEKIVLRNKKPIKPQKYSDSEDESVSSAESNRTRPMTRRSSSSQPVKPSSRSLRSSVRNSPQKPEVQSVVKSARDNKTWTKRKREQIANKSSLSIEKTPCTTEKRQKSKGESQESEDESLGTVLDKIKKKRQLMAAIVEKNSQEKDLSKLTELKEKVDSSKISDDEGSFRGFATKVISKVLNSSSTHGSVNLTISEEVHAKPNVLKIQDTLTQAASPPREIKHPKTELLGPLIPPTEIIKSEQKDSLSSSNVQVGSLSSRPSLSESEKKCIHIPSNNNTAIVDIPPAASLGRKERVNMSTEQIEKWLNESSMAKEESKAEMETVSNFQFEVSEKNKSDMGHISIPTRIQHLVRPVNVAIAKMAEKIVPKDRLANQMKLAMITGTGIAVAKIPTPINPIPTNRNKINADIKEIIKGRIAKAGLVCIPNKEIIGCEDSDVSSRADGMTSTEGSPDKKSAEKKPIFQQRKTFLPKVKERKTATPSVNAFSPENESSVYAFESDTEAPVSTPFRRKQRDSKSGASGSSDMDLSRTESDDGNIKTPIKAADKDEKELSKSKSVGTSSEEVEAESSKLVTSSINTSNQFNKFQMPERFRNLSNVQVLPLGKIPTMWNNLNCSASIAVQVNFDDQPQDSDGQGMSEDMGLHKSTEISTQTESTNENEDENDAHVFYIPLQTVARNGPNLVQGQSLIQGVAVKLGTEGPNGPNQRVLLRAQLVTKPPMAVARCPPVGTVQPTTRTPPTIGSSDPIPSTSQSSTFSSPPEVSSNLNSERNTVNKQQASVSTTAGTEKNSKSPKVSRERKSSVDTAKTGKKNQSKSKKGSEPLSIAEMTFPSMEVKGEARLVEAPTFHPSEKDFQDPLEYIDKIRPIAEKYGICRVVPPSNFKPECKVSDDMRFTAYNQYIHRMLHRWGPNVKEMMAIKKYLATQSITLNQPPWIGGMEVDLPHLYQTVQSLGGLKEVIEKKKWQKVADGMKIPKSAQDRVTKLDDIYCKYLLPYDTLSTDEREKLFEDVEAEWKQRESKALQQLSSTQSSDNDDDEDEDSSDDTEECIVKGRNMPLNAFYRIARNTQRMWFGENQNSASEAEGASATEVESAFWKHVAERKRHVCVHAASIDSSGRGFGFSVAKNSPFARHPWNLKVLTNNASSVLRALGPLMGVTVPTLHVGMLFSACCWYRDPHGLPWIEYLHTGAKKIWYGIPNKHNDNFREALSKMVPRFCKNKTIWLPSDTAMVPPEMLVSNGVPLCQTVQEPGQFIIVFPKAFTSSICTGYVVSESVYFAQTTWLQHAEEIFKDLQDSCEPSMFSFERLLFCIINDSRSHIDVLRQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-