Basic Information

Gene Symbol
-
Assembly
GCA_947507515.1
Location
OX382206.1:2245839-2265083[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 11 0.00095 0.058 14.1 3.4 1 23 238 260 238 260 0.97
2 11 0.075 4.5 8.1 11.8 1 23 266 288 266 288 0.96
3 11 0.00036 0.022 15.4 6.2 1 23 294 316 294 316 0.98
4 11 0.00027 0.017 15.8 1.3 1 23 322 344 322 344 0.98
5 11 1.7e-05 0.001 19.6 1.0 1 23 350 372 350 372 0.97
6 11 1.8e-05 0.0011 19.5 0.0 1 23 378 400 378 400 0.98
7 11 0.0002 0.012 16.2 0.4 1 23 405 427 405 427 0.96
8 11 0.095 5.8 7.8 0.9 3 23 435 457 434 457 0.90
9 11 9.7e-05 0.0059 17.2 0.4 1 23 588 610 588 610 0.97
10 11 0.00036 0.022 15.4 1.4 1 23 2052 2074 2052 2074 0.96
11 11 0.0001 0.0063 17.1 4.3 1 23 2084 2106 2084 2106 0.97

Sequence Information

Coding Sequence
ATGTGTATGCCAACGCCTAACAATGTGTCTGGCTTTGGAGGATATTCTTGGTTCACCAGTACAGCTGACCTTACCAAGGGTGAAGTGGATACTCCAAGCAGCCTCAGTTATACCCTTGGAAGTAATGTCTCCCCAGAAACCACCCTAACAGTAATGTCTCATAAGACGCCTCAGGTTCAAGATAAAGTGGGTACAGTCTCAGTAGCAGTGTCCAACACTGGAGCACAAGTTACTAGGGTCGTGACTACAGGCACTCCGGTGACAGCGAGACGAGCAATGTTTGTGCTGAATGAGACTCCACTAAATCGAGTGACGCAGCAGAATCAAACAGCTACAATCCACACAAATCTTGCATCAAAGCCGTTTATGACACCTCTCGGACCTATCCAGCTCACTGTGGAAGAGTGCAACGAGATCTTGATGAAGCGGGCTCTTCAAGCACAAGGCATTGCTACCCCTGTCGTAGACACTTCTCAACTGAACCATACAATCCTGAATGGCAGCTTGAAAACACTTACCGAGAATACACAGCAAAATCAGCAGCAGGAAACAATACAGACGACTACAGTCCAGCACCATCTGTTACATACTAAACAGGAGCCTGGCACAACTAATAATTCACCTAAAACGGTGTATTCGCAGACTGAGCTGCTGTCGACTAACTCTGTGATGACGTCAGCACAGACGCCGGCACCCGTGAAGGAACGACCTTACTCCTGCGATGAGTGCGGGAAGAGCTTTCTACTGAAACACCATCTTACCACTCACGCGAGAGTACATACCGGTGAGCGTCCACACGTGTGCGTTCACTGCGGCAAGTCATTCGCGCACAAACACTGCCTCAACATGCATCTACACCTGCACTCCGACAGCCGGCCGTACCAATGCACCGAGTGCAAGAAAACCTTCACACTGAAACACCATCTCGTCTCGCACTCCAGGGTGCACAGTCGGGACCGTCCGTACGTTTGCAACGAGTGCGGGCGCGGCTTCCCGCTGAACCGGCATCTCGTCACGCATCGCAAGTACCACGCGGGCGAGAGGCCTTATGTATGCAATGATTGTGGGGAGAGTTTTGCACAGAAGGAGCACCTAGTGATGCACAGTCGGTTCCACGGCTCTCTCTCTCCGTTCGTGTGTCCGGACTGTGGCGCCGCCTTCGCCCGCAAGTTCCAACTCGTGAACCACGGCCGGGTGCACGGCCGCGTGCCGCACGCCTGCCCCGTTTGCGGGAAAGAGTTTCTGCAGAAGAGAACTCTTGTCGCACATATGAAAATACATACAGGAGAAGGCGTCGTCGCATGCCTAGAATGTGGCGAAGCGTTCAAATGTAAAGCCGATTTGACACAACACTACAAAGTAACGAGGCATTGCTCATACGGCACCCCGGTACAAACTATCCAACAAGTTACAcaagatcatgaacaacaaacgcaacaacagcaacaacaacagcagcagcaacaacaacaacagcagcagcagcaacaacaacaacagcagcagcagcaacaacaacaacaaaCAACAGTTATCAAGTCTGATGATTTTAATATCAAACCGCAAATTGTACAGGTGTTCTGCAAATCTcaagtacaacaattgcaacaaatggcgcaacaacaacaacaacagcagcagcagcagcagcaacaacaacaacaacaaaCAACAGTTATAAAGTCTGACGATTTTAAACCACAGATTGTGCAGGTGATTGGTGCAGACGGCCAACTCGTATCAGAGAAAACCACGCCTGCGTACGCATGTCCCGAGTGTGGCTCATGTTTCAACACTAAGGAGGCGCTGTCGCTGCACGTGCGGCTGCACGCGGGGGACCGCACGTGCGTGACGGACCTGTGCGCGCTCACCGCCGCGCTGCAGCCTGCGCTCGTGCACCACGCGCCCAACGCACGTCAGTACTCTATGCACATACACATACACATACACATACACGACCGCACGTGCGTGACGGACCTGTGCGCGCTCACCGCCGCGCTGCAGCCTGCGCTCGTGCACCACGCGCCCAACGCACGTCAGTACTCTATGCACATACACATACACATACACATACACGACCGCACGTGCGTGACGGACCTGTGCGCGCTCACCGCCGCGCTGCAGCCTGCGCTCGTGCACCACGCGCCCAACGCACGTCAGTACTCTATGCACATACACATACACATACACATACACATACACGACCGCACGTGCGTGACGGACCTGTGCGCGCTCACCGCCGCGCTGCAGCCTGCGCTCGTGCACCACGCGCCCAACGCACGTCAGTACTCTATGCACATACACATACACATACACATACACGACCGCACGTGCGTGACGGACCTGTGCGCGCTCACCGCCGCGCTGCAGCCTGCGCTCGTGCACCACGCGCCCAACGCACGTCAGTACTCTATGCACATACACATACACATACACGACCGCACGTGCGTGACGGACCTGTGCGCGCTCACCGCCGCGCTGCAGCCTGCGCTCGTGCACCACGCGCCCAACGCACGTCAGTACTCTATGCACATACACATACACATACACATACACGACCGCACGTGCGTGACGGACCTGTGCGCGCTCACCGCCGCGCTGCAGCCTGCGCTCGTGCACCACGCGCCCAACGCACGTCAGTACTCTATGCACATACACATACACATACACATACACGACCGCACGTGCGTGACGGACCTGTGCGCGCTCACCGCCGCGCTGCAGCCTGCGCTCGTGCACCACGCGCCCAACGCACGTCAGTACTCTATGCACATACACATACACATACACATACACATACACGACCGCACGTGCGTGACGGACCTGTGCGCGCTCACCGCCGCGCTGCAGCCTGCGCTCGTGCACCACGCGCCCAACGCACGTCAGTACTCTATGCACATACACATACACATACACATACACATACACATACACATACACATACACATACACATACACATACACATACACATACACATACACATACACATACACATACACGACCGCACGTGCGTGACGGACCTGTGCGCGCTCACCGCCGCGCTGCAGCCTGCGCTCGTGCACCACGCGCCCAACGCACGTCAGTACTCTATGCACATACACATACACATACACATACACGACCGCACGTGCGTGACGGACCTGTGCGCGCTCACCGCCGCGCTGCAGCCTGCGCTCGTGCACCACGCGCCCAACGCACGTCAGTACTCTATGCACATACACATACACATACACATACACGACCGCACGTGCGTGACGGACCTGTGCGCGCTCACCGCCGCGCTGCAGCCTGCGCTCGTGCACCACGCGCCCAACGCACGTCAGTACTCTATGCACATACACATACACATACACATACACGACCGCACGTGCGTGACGGACCTGTGCGCGCTCACCGCCGCGCTGCAGCCTGCGCTCGTGCACCACGCGCCCAACGCACGTCAGTACTCTATGCACATACACATACACATACACATACACGACCGCACGTGCGTGACGGACCTGTGCGCGCTCACCGCCGCGCTGCAGCCTGCGCTCGTGCACCACGCGCCCAACGCACGTCAGTACTCTATGCACATACACATACACATACACATACACGACCGCACGTGCGTGACGGACCTGTGCGCGCTCACCGCCGCGCTGCAGCCTGCGCTCGTGCACCACGCGCCCAACGCACGTCAGTACTCTATGCACATACACATACACATACACGACCGCACGTGCGTGACGGACCTGTGCGCGCTCACCGCCGCGCTGCAGCCTGCGCTCGTGCACCACGCGCCCAACGCACGTCAGTACTCTATGCACATACACATACACATACACGACCGCACGTGCGTGACGGACCTGTGCGCGCTCACCGCCGCGCTGCAGCCTGCGCTCGTGCACCCCGCGCCCAACGCACGTCAGTACTCTATGCACATACACATACACATACACATACACGACCGCACGTGCGTGACGGACCTGTGCGCGCTCACCGCCGCGCTGCAGCCTGCGCTCGTGCACCACGCGCCCAACGCACGTCAGTACTCTATGCACATACACATACACATACACGACCGCACGTGCGTGACGGACCTGTGCGCGCTCACCGCCGCGCTGCAGCCTGCGCTCGTGCACCACGCGCCCAACGCACGTCAGTACTCTATGCACATACACATACACATACACATACACATACACGACCGCACGTGCGTGACGGACCTGTGCGCGCTCACCGCCGCGCTGCAGCCTGCGCTCGTGCACCACGCGCCCAACGCACGTCAGTACTCTATGCACATACACATACACATACACATACACGACCGCACGTGCGTGACGGACCTGTGCGCGCTCACCGCCGCGCTGCAGCCTGCGCTCGTGCACCACGCGCCCAACGCACGTCAGTACTCTATGCACATACACATACACATACACATACACGACCGCACGTGCGTGACGGACCTGTGCGCGCTCACCGCCGCGCTGCAGCCTGCGCTCGTGCACCACGCGCCCAACGCACGTCAGTACTCTATGCACATACACATACACATACACATACACGACCGCACGTGCGTGACGGACCTGTGCGCGCTCACCGCCGCGCTGCAGCCTGCGCTCGTGCACCACGCGCCCAACGCACGTCAGTACTCTATGCACATACACATACACATACACATACACGACCGCACGTGCGTGACGGACCTGTGCGCGCTCACCGCCGCGCTGCAGCCTGCGCTCGTGCACCACGCGCCCAACGCACGTCAGTACTCTATGCACATACACATACACATACACATACACGACCGCACGTGCGTGACGGACCTGTGCGCGCTCACCGCCGCGCTGCAGCCTGCGCTCGTGCACCACGCGCCCAACGCACGTCAGTACTCTATGCACATACACATACACATACACATACACGACCGCACGTGCGTGACGGACCTGTGCGCGCTCACCGCCGCGCTGCAGCCTGCGCTCGTGCACCACGCGCCCAACGCATGTCAGTACTCTATGCACATACACATACACATACACATACACGACCGCACGTGCGTGACGGACCTGTGCGCGCTCACCGCCGCGCTGCAGCCTGCGCTCGTGCACCACGCGCCCAACGCACGTCAGTACTCTATGCACATACACATACACATACACATACACGACCGCACGTGCGTGACGGACCTGTGCGCGCTCACCGCCGCGCTGCAGCCTGCGCTCGTGCACCACGCGCCCAACGCACGTCAGTACTCTATGCACATACACATACACATACACATACACGACCGCACGTGCGTGACGGACCTGTGCGCGCTCACCGCCGCGCTGCAGCCTGCGCTCGTGCACCACGCGCCCAACGCACGTCAGTACTCTATGCACATACACATACACATACACATACACGACCGCACGTGCGTGACGGACCTGTGCGCGCTCACCGCCGCGCTGCAGCCTGCGCTCGTGCACCACGCGCCCAACGCACGTCAGTACTCTATGCACATACACATACACATACACATACACATACACGACCGCACGTGCGTGACGGACCTGTGCGCGCTCACCGCCGCGCTGCAGCCTGCGCTCGTGCACCACGCGCCCAACGCACGTCAGTACTCTATGCACATACACATACACATACACATACACGACCGCACGTGCGTGACGGACCTGTGCGCGCTCACCGCCGCGCTGCAGCCTGCGCTCGTGCACCACGCGCCCAACGCATGTCAGTACTCTATGCACATACACATACACGACCGCACGTGCGTGACGGACCTGTGCGCGCTCACCGCCGCGCTGCAGCCTGCGCTCGTGCACCACGCGCCCAACGCACGTCAGTACTCTATGCACATACACATACACATACACATACACGACCGCACGTGCGTGACGGACCTGTGCGCGCTCACCGCCGCGCTGCAGCCTGCGCTCGTGCACCACGCGCCCAACGCACGTCAGTACTCTATGCACATACACATACACATACACATACACGACCGCACGTGCGTGACGGACCTGTGCGCGCTCACCGCCGCGCTGCAGCCTGCGCTCGTGCACCACGCGCCCAACGCACATCAACACGTTCAAATCATATCAAGTCCGACCAATGCAGTGCATACGCAAGTTATAGCAACGAATCATCACGCAGCGCCGCGGCCGAAAATGCACTTTTGCGGTGAATGCGGTAAAGGGTTCGCCGCGAAACACGGACTATTAGCGCATCAAAGGAGGCATCCAGATGGAAGTTGCACGTTGCGCACACACGTGTGCGATCAGTGCGGCAAAGCTTTCTTCCAAAAGAACCATCTGATGTTACATCAACGGCAGCACATGGATTTGACTAGAAATAATAACTCGCAGCAACAGCAACAACAACAGCAGCAAGCGCAACAACAAGCCGTCCAACAAGCCGCGCAACAAGCTGCCCAACAAGTCGTCCAACAAGTCCAGCAGCAAGTACAACAAGTGCAGGTCCATCAGCAGAATAACATGGAAATGGACCAGGATCATCAGCAGCCGACGCACATTCAAGTGGTGAATCGATCAGGGCAAGTGATCGGTAACCAGATAATAGTGGATGTAGGCGGAGTAGGTCGCCGGTTAGTGGGTCCGCACGTCATCACTATGCCGCGAGACGCGAAGCATTTAACGCAGAAACACCACGCACTAAGACATCATACCACAAGTGGCGACGTGAAAGAACTAGGAGGCTTGGTTTTATCATCGGGCCGGGGAACCGGCCTTATCAAGTACGAAATATCAATTCCACCGGCCAACTCAAACGTACAAGTGCAACAACTTGACTGA
Protein Sequence
MCMPTPNNVSGFGGYSWFTSTADLTKGEVDTPSSLSYTLGSNVSPETTLTVMSHKTPQVQDKVGTVSVAVSNTGAQVTRVVTTGTPVTARRAMFVLNETPLNRVTQQNQTATIHTNLASKPFMTPLGPIQLTVEECNEILMKRALQAQGIATPVVDTSQLNHTILNGSLKTLTENTQQNQQQETIQTTTVQHHLLHTKQEPGTTNNSPKTVYSQTELLSTNSVMTSAQTPAPVKERPYSCDECGKSFLLKHHLTTHARVHTGERPHVCVHCGKSFAHKHCLNMHLHLHSDSRPYQCTECKKTFTLKHHLVSHSRVHSRDRPYVCNECGRGFPLNRHLVTHRKYHAGERPYVCNDCGESFAQKEHLVMHSRFHGSLSPFVCPDCGAAFARKFQLVNHGRVHGRVPHACPVCGKEFLQKRTLVAHMKIHTGEGVVACLECGEAFKCKADLTQHYKVTRHCSYGTPVQTIQQVTQDHEQQTQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQTTVIKSDDFNIKPQIVQVFCKSQVQQLQQMAQQQQQQQQQQQQQQQQQTTVIKSDDFKPQIVQVIGADGQLVSEKTTPAYACPECGSCFNTKEALSLHVRLHAGDRTCVTDLCALTAALQPALVHHAPNARQYSMHIHIHIHIHDRTCVTDLCALTAALQPALVHHAPNARQYSMHIHIHIHIHDRTCVTDLCALTAALQPALVHHAPNARQYSMHIHIHIHIHIHDRTCVTDLCALTAALQPALVHHAPNARQYSMHIHIHIHIHDRTCVTDLCALTAALQPALVHHAPNARQYSMHIHIHIHDRTCVTDLCALTAALQPALVHHAPNARQYSMHIHIHIHIHDRTCVTDLCALTAALQPALVHHAPNARQYSMHIHIHIHIHDRTCVTDLCALTAALQPALVHHAPNARQYSMHIHIHIHIHIHDRTCVTDLCALTAALQPALVHHAPNARQYSMHIHIHIHIHIHIHIHIHIHIHIHIHIHIHIHIHIHDRTCVTDLCALTAALQPALVHHAPNARQYSMHIHIHIHIHDRTCVTDLCALTAALQPALVHHAPNARQYSMHIHIHIHIHDRTCVTDLCALTAALQPALVHHAPNARQYSMHIHIHIHIHDRTCVTDLCALTAALQPALVHHAPNARQYSMHIHIHIHIHDRTCVTDLCALTAALQPALVHHAPNARQYSMHIHIHIHIHDRTCVTDLCALTAALQPALVHHAPNARQYSMHIHIHIHDRTCVTDLCALTAALQPALVHHAPNARQYSMHIHIHIHDRTCVTDLCALTAALQPALVHPAPNARQYSMHIHIHIHIHDRTCVTDLCALTAALQPALVHHAPNARQYSMHIHIHIHDRTCVTDLCALTAALQPALVHHAPNARQYSMHIHIHIHIHIHDRTCVTDLCALTAALQPALVHHAPNARQYSMHIHIHIHIHDRTCVTDLCALTAALQPALVHHAPNARQYSMHIHIHIHIHDRTCVTDLCALTAALQPALVHHAPNARQYSMHIHIHIHIHDRTCVTDLCALTAALQPALVHHAPNARQYSMHIHIHIHIHDRTCVTDLCALTAALQPALVHHAPNARQYSMHIHIHIHIHDRTCVTDLCALTAALQPALVHHAPNARQYSMHIHIHIHIHDRTCVTDLCALTAALQPALVHHAPNACQYSMHIHIHIHIHDRTCVTDLCALTAALQPALVHHAPNARQYSMHIHIHIHIHDRTCVTDLCALTAALQPALVHHAPNARQYSMHIHIHIHIHDRTCVTDLCALTAALQPALVHHAPNARQYSMHIHIHIHIHDRTCVTDLCALTAALQPALVHHAPNARQYSMHIHIHIHIHIHDRTCVTDLCALTAALQPALVHHAPNARQYSMHIHIHIHIHDRTCVTDLCALTAALQPALVHHAPNACQYSMHIHIHDRTCVTDLCALTAALQPALVHHAPNARQYSMHIHIHIHIHDRTCVTDLCALTAALQPALVHHAPNARQYSMHIHIHIHIHDRTCVTDLCALTAALQPALVHHAPNAHQHVQIISSPTNAVHTQVIATNHHAAPRPKMHFCGECGKGFAAKHGLLAHQRRHPDGSCTLRTHVCDQCGKAFFQKNHLMLHQRQHMDLTRNNNSQQQQQQQQQAQQQAVQQAAQQAAQQVVQQVQQQVQQVQVHQQNNMEMDQDHQQPTHIQVVNRSGQVIGNQIIVDVGGVGRRLVGPHVITMPRDAKHLTQKHHALRHHTTSGDVKELGGLVLSSGRGTGLIKYEISIPPANSNVQVQQLD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-