Basic Information

Insect: Eulithis testata
Gene Symbol: -
Assembly: GCA_947507515.1
Location: OX382220.1:6520466-6523070[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.0004 0.024 15.3 2.0 1 23 225 247 225 247 0.98

2 11 9.6 5.9e+02 1.5 4.4 1 20 260 283 260 285 0.91

3 11 0.06 3.7 8.4 2.0 2 23 500 521 499 521 0.95

4 11 0.15 9.3 7.1 0.2 6 23 531 549 531 549 0.96

5 11 0.00018 0.011 16.4 0.1 3 23 559 579 558 579 0.97

6 11 0.00018 0.011 16.3 3.4 2 23 583 604 582 604 0.97

7 11 0.15 9.4 7.1 1.3 2 23 618 640 617 640 0.96

8 11 0.0029 0.17 12.6 3.2 1 23 646 668 646 668 0.97

9 11 1.2e-05 0.00075 20.0 1.4 2 23 675 696 675 696 0.98

10 11 0.00052 0.031 14.9 2.9 1 23 702 725 702 725 0.96

11 11 0.0091 0.55 11.0 1.3 1 23 729 752 729 752 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.0004	0.024	15.3	2.0	1	23	225	247	225	247	0.98
2	11	9.6	5.9e+02	1.5	4.4	1	20	260	283	260	285	0.91
3	11	0.06	3.7	8.4	2.0	2	23	500	521	499	521	0.95
4	11	0.15	9.3	7.1	0.2	6	23	531	549	531	549	0.96
5	11	0.00018	0.011	16.4	0.1	3	23	559	579	558	579	0.97
6	11	0.00018	0.011	16.3	3.4	2	23	583	604	582	604	0.97
7	11	0.15	9.4	7.1	1.3	2	23	618	640	617	640	0.96
8	11	0.0029	0.17	12.6	3.2	1	23	646	668	646	668	0.97
9	11	1.2e-05	0.00075	20.0	1.4	2	23	675	696	675	696	0.98
10	11	0.00052	0.031	14.9	2.9	1	23	702	725	702	725	0.96
11	11	0.0091	0.55	11.0	1.3	1	23	729	752	729	752	0.94

Sequence Information

Coding Sequence: ATGGATTTAGACGAGCTGGACTGCCCGAAGTTTAAGCCAACAGGCGCACTAAAAACTTATCTAAAAGTTGTGAAGAAAGTGGAAGATTTGACAACGATAAGTGCAGTGAACTTTTTGCTGGCGGGAACTTTGAAATCGAAAGTTTGCAAATATTGTCTCAGCGTGACCGATGATCTGTTTGAACTAGATAAAGTAATGGAAATAGCCAATAAAGGAGGCCTGTATTCTGTAACCGTCAAAGATATGATTGCAAGTTTTCATCCCTTCAAGGTGGCTGATGATCCAAACTTTCCGAATAGAATCTGCAATAAATGCTTAGACCGCACCCTAAACTCCTACCTTTTCACTCAGCAATGTGAACAAGCCGAGCGAGCCCTTAGAAACTGTTTCGAAGACATCAATGCAAAGTTTTTTAAACTGGACCCTTTAGATAAACAGCAAACACACGGGCGCGGGCGGAAAAAAAACATCATAAACCATAACAGAATTACCGTCAACCACTCCAAAGTTATTGATTATGCTGATCCCATCATACACATTGTCAATACCCATTCCGAATCACTATCGTCTGAGCCAGCGATAAACCCACTTGAGTGTCTCAAATGCTGTCAAATCCTACCAAACATACAATCACTGGCGAGCCACACAAATTCCCATCCAGCAACTATGTGGTTTACATGCAGACTTTGTGCTCAATCGTTCCCAAAACTGTATTTACTAAAGCGTCATTATCGCAGTCACCAAGAAGTTTCTAATTCAAGAATGGAAAGTAAGAAGTTTGAATGCAAAAAATGCGGTGACATTAACAAAAGTGGTTTCAAACACTTTCAGCATCTTGAAAAGCATCATTTCAAAATGGTTTTAGAACATCTTTTGTACAGACAGATGGATCAGCTGTGCTCTGTATGCTTGGGTAAAGAAACTTTAGTGCCATTAGATGACATAATTTGCCTTTATGGTGGACCTCCAGAATTAATGGGAGATAGAACAATACAAAGCATTTTGGACTCTGTACTACCTGGGTTGAACGAAAAAATGAACAAATATACAGGATCAAAAGTATGCGAAAAATGTCTAAATAGTGCTATAACAACATATACCTTCATGCACAATGCGTATTTTGCTAGAAAACGTCTGAGCACATGCGTTAGTCATATGCTAGAAAACTTGAAAGATATAACTCCGGAGAAAACATTATGTATTGAGATTGCAAAAGGTATGATCATGCCTATAAAGCTTGATAAAACTATTGATGATGATTTAAAGGAAGATACTGATGATGAAGATATGAAAAAGGAAGTTTTCCTAGAAGATGAATACAGAATCAAATCTGAAGATGAAATTGAACCCGAGATCGAACCTTTGCAAAATCATGTAGAAACAAAACTTCCGAAATCTGAGGTTAAAGATGAAGTACATTTAAATGGATACCAACATGATGTAAGAGAATTTCTTAAATTCAAGAAACCTAAGGTACAAACAGTTGAGAGAATACTTACATGTCCAATGTGCGATAAACATTTTCTATCAGACTACTTTGTTAAGAAACACATTCTGAAGCATATTAGTATGAAAGTGAAGTGTATACCATGTGGCACTGAATTTGGAAACAAATTTACCTTAAAAGAACACACAAAATACGCACATGAGCTGTTCCAAAGTGATTATAGAGCTTGTAAAATTTGCGGAAGAGGTTTCGCTAAAATAGACGACCTAAAAAACCATGAAAAAATACACAAAAATAAAAAATGTCTTCTGTGTAATAAGGTTTTCAAAACTCAGAGATTCTATAACATCCACATGAAAAGACACATCCCAAAACTGATGATTCTAAAGAAAATCTATGGAAAAACTTGCAGTTTCTGCGAAATAGAGTGTTCAAACGAAAACCAACTCTTACTACATGTAAATAAAGTACACCTGCAAATAAAACCGTACAGCTGTGATATGTGCGAGAAAAAATTCTATACAGAGTATAATTTAAAATTTCACAAAAAGATTCACAGTAAATACAGTAAAGAGAAGTGCAATTTCTGTGGCAGAATTTTTAAATCTAGAAAATTATTGGTTATTCACATCAGGAAACATATAGGAGCAACCCCACATAGATGCCAATTATGCAACCAAGCATTCTACTCGCAAGCAAAGCTGAAATACCACATGAATTTAAACCATAGTGGTAGTTTTGTGTGTAAAATATGCAAACATGTATCTGTAAGCAAAAATGATCTTAAATTACATGAGGCTAAGACACATAGTTTTTTATAA
Protein Sequence: MDLDELDCPKFKPTGALKTYLKVVKKVEDLTTISAVNFLLAGTLKSKVCKYCLSVTDDLFELDKVMEIANKGGLYSVTVKDMIASFHPFKVADDPNFPNRICNKCLDRTLNSYLFTQQCEQAERALRNCFEDINAKFFKLDPLDKQQTHGRGRKKNIINHNRITVNHSKVIDYADPIIHIVNTHSESLSSEPAINPLECLKCCQILPNIQSLASHTNSHPATMWFTCRLCAQSFPKLYLLKRHYRSHQEVSNSRMESKKFECKKCGDINKSGFKHFQHLEKHHFKMVLEHLLYRQMDQLCSVCLGKETLVPLDDIICLYGGPPELMGDRTIQSILDSVLPGLNEKMNKYTGSKVCEKCLNSAITTYTFMHNAYFARKRLSTCVSHMLENLKDITPEKTLCIEIAKGMIMPIKLDKTIDDDLKEDTDDEDMKKEVFLEDEYRIKSEDEIEPEIEPLQNHVETKLPKSEVKDEVHLNGYQHDVREFLKFKKPKVQTVERILTCPMCDKHFLSDYFVKKHILKHISMKVKCIPCGTEFGNKFTLKEHTKYAHELFQSDYRACKICGRGFAKIDDLKNHEKIHKNKKCLLCNKVFKTQRFYNIHMKRHIPKLMILKKIYGKTCSFCEIECSNENQLLLHVNKVHLQIKPYSCDMCEKKFYTEYNLKFHKKIHSKYSKEKCNFCGRIFKSRKLLVIHIRKHIGATPHRCQLCNQAFYSQAKLKYHMNLNHSGSFVCKICKHVSVSKNDLKLHEAKTHSFL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00737829;
90% Identity: -
80% Identity: -