Etes014528.1
Basic Information
- Insect
- Eulithis testata
- Gene Symbol
- Zfy2
- Assembly
- GCA_947507515.1
- Location
- OX382206.1:7502282-7506463[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 0.052 3.2 8.6 3.1 1 23 28 50 28 50 0.97 2 12 0.49 30 5.5 1.7 1 23 57 80 57 80 0.86 3 12 0.072 4.4 8.2 4.5 1 23 84 106 84 106 0.98 4 12 1.8e-05 0.0011 19.5 4.3 1 23 111 134 111 134 0.96 5 12 0.0093 0.56 11.0 0.2 1 23 138 161 138 161 0.95 6 12 7 4.3e+02 1.9 0.1 3 21 175 193 174 194 0.83 7 12 0.0007 0.042 14.5 1.1 3 23 208 229 206 229 0.95 8 12 0.14 8.4 7.3 0.1 1 21 249 269 249 272 0.84 9 12 1.9e-05 0.0012 19.4 2.5 1 23 287 309 287 309 0.97 10 12 0.00098 0.06 14.0 0.1 1 23 315 337 315 337 0.94 11 12 1.8e-07 1.1e-05 25.8 1.0 2 23 343 364 343 364 0.97 12 12 0.022 1.3 9.8 4.8 1 23 370 393 370 394 0.96
Sequence Information
- Coding Sequence
- ATGCAACTGTTTGCGACAGATGAAGAGGCCAAAGACGAACTGGAACAGAGAAAACACATTGAACCGTATCTCTCTGCGGAGCATAAGTGTGAAATATGTTATACAGTTTATAAGTATCGTAAGCTGTTGGACTTTCATATGCGATGGCATGATCCATCAACAGGCGATCACGAATGCATTATTTGCCGCATGAGGTTTAAAACCAGGAGAGCTGTTATCAAACATAGATACGATTCGCACTATGGCAAGTTCAAATGTAAACGGTGTCCAATGGTTACTTATCATAAAGGAGCAATGGAGACTCATCACCAATATCACGCAGGAATAATATTTGCTTGTAAACTTTGCGACCAAACCTTCAACCATTCTTCAACGTACAAAACACACATGCGCTTACGGCATAAAACTGAGCATGTGTGTGTAACGTGCGCTAGAACTTTTGTTTCGGAAAAAGGGCTGTCAGCACATAGGATTATCATTCACAAGACGAAATCGCTAGTAGATAGTGAAGCTACTGCGCATTGCGAGCCGTGTGGCCTCACGTTCGCGAACGAACAGATCTACACCGTGCACATAAAGAACACTGACAAACACAAAGACCTGGCAAGCGCAATCATCGCTTGCAAACTGTGCGGCTTGAGATTCGAAAACAAGAACGGTTTGAAAGAGCACAGGCATTCGGAGCATCCGAAATATCCTTTACTCAAACCTGCGAAGACAAGAAATACACACGAAAAGGACGCCTACAAGTGTTCTATTTGTGGAGTGGTGGGCACCAGTCGGCTGTGGGTGTACAAACATGTTGCATTCGCGCATCCTGACTCGCCGTACGCAGCGGACTTGACGCGTCGTCGCCAACACATGTGCGATACTTGTGGGAAGTGCTATACTACAATCTACGCGCTTCGTGACCACATCAACATACACACGGGCGCAAAGCCGTATACATGTGTGGTGTGCGCGGCTCGCTTCGCTTCCCGCAGCAATCTACAGATTCACGCGGACCAACACGCGCCTGCGCGTCGCGAATGTTCGCGTTGCGGGAAGAAGTTCGTCAGCGCTTCTAACCTTAGTAACCATATGCGGTCGCACATCCAAGACCGGCGCTACAAATGCTTTTTATGCCACAAAGGGTTCTTACACTCGGCTACTTTGCGGGAACACGTTCGAGGTGTGCACCACAACGTACGCCGAACGCGCAAGCTAGTCAAGAGAGAAACTTTTGCTCACGAATCATAA
- Protein Sequence
- MQLFATDEEAKDELEQRKHIEPYLSAEHKCEICYTVYKYRKLLDFHMRWHDPSTGDHECIICRMRFKTRRAVIKHRYDSHYGKFKCKRCPMVTYHKGAMETHHQYHAGIIFACKLCDQTFNHSSTYKTHMRLRHKTEHVCVTCARTFVSEKGLSAHRIIIHKTKSLVDSEATAHCEPCGLTFANEQIYTVHIKNTDKHKDLASAIIACKLCGLRFENKNGLKEHRHSEHPKYPLLKPAKTRNTHEKDAYKCSICGVVGTSRLWVYKHVAFAHPDSPYAADLTRRRQHMCDTCGKCYTTIYALRDHINIHTGAKPYTCVVCAARFASRSNLQIHADQHAPARRECSRCGKKFVSASNLSNHMRSHIQDRRYKCFLCHKGFLHSATLREHVRGVHHNVRRTRKLVKRETFAHES
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -