Basic Information

Insect: Eulithis testata
Gene Symbol: -
Assembly: GCA_947507515.1
Location: OX382211.1:7749241-7751411[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 0.00035 0.022 15.4 2.2 2 23 139 160 138 160 0.98

2 7 8.4e-06 0.00051 20.5 1.7 1 23 166 188 166 188 0.98

3 7 3.5e-05 0.0021 18.6 0.3 2 23 195 216 194 216 0.97

4 7 0.00036 0.022 15.4 4.1 1 23 222 244 222 244 0.98

5 7 2.8e-07 1.7e-05 25.2 0.8 1 23 250 272 250 272 0.98

6 7 7.2e-07 4.4e-05 23.9 2.2 1 23 278 301 278 301 0.96

7 7 0.0014 0.083 13.6 2.8 1 23 305 327 305 327 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	0.00035	0.022	15.4	2.2	2	23	139	160	138	160	0.98
2	7	8.4e-06	0.00051	20.5	1.7	1	23	166	188	166	188	0.98
3	7	3.5e-05	0.0021	18.6	0.3	2	23	195	216	194	216	0.97
4	7	0.00036	0.022	15.4	4.1	1	23	222	244	222	244	0.98
5	7	2.8e-07	1.7e-05	25.2	0.8	1	23	250	272	250	272	0.98
6	7	7.2e-07	4.4e-05	23.9	2.2	1	23	278	301	278	301	0.96
7	7	0.0014	0.083	13.6	2.8	1	23	305	327	305	327	0.98

Sequence Information

Coding Sequence: ATGCCTCCAATTATGTGCAGAACATGCTTGGGGACGAACTTTTTATCTAATATTTTTCAGTTGGATGAATCTACAAAAATATCATCAAAAATTATGTCAATAGCTAATATCACGATTACTCCAAACGATGGGCTATCTGATAAAATTTGCAACATGTGTGTGCACAAGTTAAATTATTGTTTAGACTTTGTAAAACTATGTGAAACTTCAGACCAAAAACAAAGACACTTTTTGGAAAAAAGCAATGAATCTACAGCTATTGAACTTGATATGGATCTTAGTCAAGACAAGTTTCCTGAATATAAACTGTTTGCTGAAACAGACCCAAGCAACGTAATGATGGATAAAAATAAAACTGAGGAAATTATTCAAGATTGTGATGATATAAAGATTACAAAAAAACAAGCAAAGCAACAGTGTTCTACTTGTGGAAAAGTCATGTCTTCTAGATTTCGGCTTAAGACTCACCTGAGAACACATACTGGAGAACGCCCTTTTGCTTGTTCACATTGTAGCAAAAAGTTTGCTATAGCACAAAACTTAAAAGTTCACTTAAGAACTCACACGGGTGAAAAACCACTGCAATGTGCTGTATGTGGAGAATCCTTTGCCCACACAGCAGGGCTGGCGACTCACAGACGCAAGCACACTGGTCAAACTCCCTATCACTGCATGCTGTGCCCACAAACCTTCCGCACCATTGGACATTTGCAATACCATGTCAGAAGACATACAGGCGAGAAAAACTTCGAGTGTGATACTTGTGGTAAGGCGTTCATCACCCGAAGCGATCTGAAGCAACATTTTCTGACTCATACTGGAGATCGACCACACGTTTGCCCTATATGTGGTGTCCGGCTGACGCGCTCTTCGCATCTTAAACGCCACATCCGACAGTCTCACGGGGGTCAATACTCGTGTAGTTCATGCTCAATGAGGTTTACACAGAAAGCACAGTACGATAAGCATAAGAAAATTCATGCTAAGCCTAAAAACAACATAAATAAATAA
Protein Sequence: MPPIMCRTCLGTNFLSNIFQLDESTKISSKIMSIANITITPNDGLSDKICNMCVHKLNYCLDFVKLCETSDQKQRHFLEKSNESTAIELDMDLSQDKFPEYKLFAETDPSNVMMDKNKTEEIIQDCDDIKITKKQAKQQCSTCGKVMSSRFRLKTHLRTHTGERPFACSHCSKKFAIAQNLKVHLRTHTGEKPLQCAVCGESFAHTAGLATHRRKHTGQTPYHCMLCPQTFRTIGHLQYHVRRHTGEKNFECDTCGKAFITRSDLKQHFLTHTGDRPHVCPICGVRLTRSSHLKRHIRQSHGGQYSCSSCSMRFTQKAQYDKHKKIHAKPKNNINK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -