Etes006855.1
Basic Information
- Insect
- Eulithis testata
- Gene Symbol
- ken
- Assembly
- GCA_947507515.1
- Location
- OX382214.1:5945811-5951856[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 0.01 0.64 10.8 1.8 2 23 63 84 62 84 0.96 2 12 0.0056 0.34 11.6 0.8 2 23 91 113 90 113 0.95 3 12 0.17 10 7.0 0.1 2 23 121 143 120 143 0.88 4 12 0.0042 0.26 12.0 3.4 1 23 149 171 149 171 0.96 5 12 7.2e-06 0.00044 20.8 2.5 3 23 179 199 177 199 0.91 6 12 0.0015 0.092 13.4 0.3 1 19 205 223 205 225 0.95 7 12 0.034 2.1 9.2 1.6 2 19 243 260 242 265 0.93 8 12 0.00014 0.0084 16.7 3.2 1 23 540 562 540 562 0.98 9 12 5.1e-06 0.00031 21.2 4.1 1 23 569 592 569 592 0.98 10 12 0.00043 0.026 15.2 1.2 1 23 600 623 600 623 0.96 11 12 0.00013 0.0077 16.8 1.7 1 23 629 653 629 653 0.97 12 12 0.00017 0.01 16.4 1.1 1 21 659 679 659 680 0.95
Sequence Information
- Coding Sequence
- ATGGATTCCAACTTGTCTTATTTTAGTTTACCATTTGTGGACTGCGTAGACCTTGAGTACGATGAACTACATCCTACTCTGCCTTCCCACGGGTCTCTACTGGGCGCTGATGATGATGTACTGGCCCGGTTCCTCTCTGAAGACGATCCCTTGGAGGAACCCGACTTGAATGGCCCCACCACTTTGCACTGCGAGATTTGCAGAAAGCAGTTTGACAATGCAAAAAAATATTATGGTCATTTGAGGGTTCACTCAAAGAATAATCTTTGGACTTGTGATAAATGTCCTAATGAGAAGTTCTCAACGAAACAGCAGCTGATGAAGCATGGCTTGACTCATCAGCCACTGGAGAAAGTGTGGCGCTGTCCTCAATGTGAGATGTCTTTTGAAGCATTGTGGAGACTGCAGCAGCATTTGTTCGCTAAGCATTTAGATTACAGGCCACACAAATGTGATGTATGTTCAAAGGCATTCCACAAACTATCTGATTTGGATAAACATAAGGATATTCATGAAGATAAAAAAAAACATGCATGCATTGTCTGCAAAAAAAAATTTGTTGATAAATCAAACCTGAAGAGGCACATGCTAACACATGGCACTGAGAAGCCACACCCGTGTCCTGGATGTGGTCATCGATTTAAACAGATTGCGTCTATGAGACGTCACAGTATCAATTGCCCGTTGGTCATAAAGACTGAAAAACAAAAATTACTCAGCAGTAACCAATGCAGAGTGTGTGGACTCACCTTTCAGTACAAGAGTTCCTTGCTAGAGCATTGTGTTAGGGAACATTCAAACAACCAATCTCAGCCTCCCCCAGAGAAACCGAAAGACGACCAGTCAAACCAACTTCATGCAGATTCAAACAGGACAGTCGATAACATAGTCGACGACATATTATCCGCCGAAGACGACTACTTGACTATGTCCACGCAAAATGAACTCGTCTACCCCACAGAGAACCCAGATAACTTGATGCAAATCGAATTACTCAAGGAAATGAACCAAATGCACATCCTAGACGACGAATTGCTGTACAACGATATAGATTTAGACAGCTTTCAAACAATGTGCAACAATATAGACTGCGAACGAAACGAGCTGTTCGATCTGAACGATGGACGAATGGATATCATCAATGGAAGGAGTCTAGATCAAGATCTAATGAATGCATTGGTGCGTGGCATAGAAGCGAAAGACGAAATCCCAAAAGATTTCATAGAACCACCAGAAATGGACACTAAAGTCAACGAATTCCTAAACCCACCAGTTTCCGTCAACGAGTGCGCAACTATATTCGAAAGTGACGTTGATTTGGAAGCTAGTACGAATCTAGCAGCGAATTTGAACCAACTCATCAGTGAAAACACTCTGAATACTGTACAGTACATTGCTACAGAGAACGATGATACATTCATTATAAGTTTGAACAGTGAAATAGATACGGAACAACTGACCGATATGTTAAATATTGGCGTTGATAAATCATATCCTTCAGAAGTTGAAGAAAACGAACCTAAACAGGCAGTACCGATAGAACCAAACCCAGTACAATTAATAGAACCTAGAAAAGAACAGACTGAAAAAGTTAAGAATAAAAGAACTAGGATTATGTATGTGTGTTTGAAATGTAAGAAGATTTTTAAAACGAAACAAAATTACACATCACATCGGGGGACACACGACACGGACCTCCAGCAGTTTAAGTGCAAAGTGTGTCTCGAGAGATTTAGTTACAAATCGACACTGAACAAACACATGAGAAAGAAACATACACCGATTGTTAAACAACCGCATACGTGCTCATTGTGTGATAAAAACTACAATGAGGCTTGGCAGCTCAAGCAACATATAGAACGCAGTCACAAATGTATTTTGCCGTATCAGTGTGAAGTGAAGGATTGCGGGAAGAAATTCTATATGAAATACGATCTAGAAACTCATTCAAGATTCCACACTGGAGAGAAACCCTACGTGTGCAACATCTGTAACAAGGGATTCAAGACTACTTCTCATCGCGCTAGGCATGTCAAAAATGTGGATTGTTCTAAACAGTCAGTATCCTTACAACACTGGTTTTCCTga
- Protein Sequence
- MDSNLSYFSLPFVDCVDLEYDELHPTLPSHGSLLGADDDVLARFLSEDDPLEEPDLNGPTTLHCEICRKQFDNAKKYYGHLRVHSKNNLWTCDKCPNEKFSTKQQLMKHGLTHQPLEKVWRCPQCEMSFEALWRLQQHLFAKHLDYRPHKCDVCSKAFHKLSDLDKHKDIHEDKKKHACIVCKKKFVDKSNLKRHMLTHGTEKPHPCPGCGHRFKQIASMRRHSINCPLVIKTEKQKLLSSNQCRVCGLTFQYKSSLLEHCVREHSNNQSQPPPEKPKDDQSNQLHADSNRTVDNIVDDILSAEDDYLTMSTQNELVYPTENPDNLMQIELLKEMNQMHILDDELLYNDIDLDSFQTMCNNIDCERNELFDLNDGRMDIINGRSLDQDLMNALVRGIEAKDEIPKDFIEPPEMDTKVNEFLNPPVSVNECATIFESDVDLEASTNLAANLNQLISENTLNTVQYIATENDDTFIISLNSEIDTEQLTDMLNIGVDKSYPSEVEENEPKQAVPIEPNPVQLIEPRKEQTEKVKNKRTRIMYVCLKCKKIFKTKQNYTSHRGTHDTDLQQFKCKVCLERFSYKSTLNKHMRKKHTPIVKQPHTCSLCDKNYNEAWQLKQHIERSHKCILPYQCEVKDCGKKFYMKYDLETHSRFHTGEKPYVCNICNKGFKTTSHRARHVKNVDCSKQSVSLQHWFS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00633003;
- 90% Identity
- -
- 80% Identity
- -