Etes019780.2
Basic Information
- Insect
- Eulithis testata
- Gene Symbol
- -
- Assembly
- GCA_947507515.1
- Location
- OX382197.1:8540160-8550175[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 24 0.0032 0.19 12.4 1.5 3 23 207 228 206 228 0.96 2 24 3.1 1.9e+02 3.0 1.2 3 23 587 609 586 609 0.85 3 24 0.052 3.2 8.6 0.6 1 21 614 634 614 635 0.96 4 24 5.6 3.4e+02 2.2 0.4 1 23 676 699 676 699 0.90 5 24 0.0076 0.46 11.2 1.7 5 21 712 728 710 729 0.92 6 24 0.43 26 5.7 0.4 2 23 737 759 736 759 0.89 7 24 0.021 1.3 9.8 0.3 3 23 778 799 776 799 0.94 8 24 0.12 7.5 7.4 1.8 6 23 809 827 805 827 0.88 9 24 0.1 6.1 7.7 0.0 1 23 853 876 853 876 0.90 10 24 0.015 0.91 10.3 3.4 1 23 881 903 881 903 0.97 11 24 0.023 1.4 9.7 0.3 1 23 909 932 909 932 0.95 12 24 0.0032 0.19 12.4 0.8 1 23 943 965 943 965 0.97 13 24 0.00014 0.0086 16.7 1.8 1 23 1017 1040 1017 1040 0.97 14 24 0.0019 0.12 13.1 1.4 1 23 1100 1123 1100 1123 0.96 15 24 0.0016 0.098 13.4 1.5 2 23 1152 1174 1151 1174 0.95 16 24 0.016 0.96 10.2 0.1 2 23 1180 1202 1179 1202 0.94 17 24 0.0052 0.32 11.8 0.3 1 21 1246 1266 1246 1267 0.95 18 24 0.00098 0.059 14.0 0.6 1 23 1277 1299 1277 1299 0.93 19 24 0.00051 0.031 14.9 0.3 2 23 1394 1416 1394 1416 0.93 20 24 6.1e-08 3.7e-06 27.3 1.1 3 23 1423 1443 1422 1443 0.98 21 24 0.0042 0.26 12.0 0.4 1 23 1464 1486 1464 1487 0.95 22 24 0.27 17 6.3 0.0 1 23 1508 1530 1508 1530 0.97 23 24 0.021 1.3 9.8 0.7 1 23 1536 1559 1536 1559 0.95 24 24 0.00029 0.018 15.7 0.4 1 23 1567 1590 1567 1590 0.96
Sequence Information
- Coding Sequence
- ATGACTGTGAACTATGATCGTGTTTGTAGACTGTGCTTGTCATCTCGAGGCGAGTTACTGCCGATTTTCCCTACCACCAGTTCGGATGACATGGAACCTCCCATCCTGGCTTCAAAAATAAAGGATTGTGTGGCTGTAGAGATAAGCGAAAATGACGACCTGCCGACAAATGTCTGCAGGAAATGCGTGGACAATGTCAACAACTGGCATTTATTCAAGTCTGTATGTTCAAAGACACAAAACAAACTACTGTCTCTCACAAGAAAGGATGGAAGCCTACTAGAAGAGGTGCAAATCAAGAGTGAACCTTTATTCTCTGAAGAGGCTTATGATGATGGAGTGGTTATTGATGGATCATACCCTGAATCTGAGAATGCAGGTTTCTCCAGTAAACTCCAGCCGGAAGGGCCACCAATTCTGGCTTCATTGGGACTCACACCGAGGAGTGATAAGGGAATGGAAAGTGAGAAGGATGAGGAGGAGGAGTACGATGAGGAGGCGAAGGTACCGCAGCCGGTGAAGGTCCCGCACATGCCTGAGGTATCCATCACCGTGATGCGTCCCACCGGCGAGACCCTCCAGTCCCGACAAGGTATCCAACAGATCGCCTCCAAGGACTGCCTCATCTGCGGACGCTCCTACAGATACTCACACAACGCGAGACGTCACGAACTCACCTCGCACAAATTCGACCGCTACACAAACAAAGTAAACAAAAAATCACACTCACGCATGCAACCTAAACTCAGGCCCAACCCGTTCAATCCGAAAGCGCGGCTCATGCCCAACCCCATCAGCCATAAAATGCAATTGCTACCCAAAATGATGCCAAGATTGATGCCGCAAAAAATTATCACCCCACCGAAACCTATCCCCATAAAATCTTCAAAGACGCCGCAAAATAATTTGCCGTATCCGTTACGCATCAAAGCTCTTAAAGACTTGCAAATAAAGAAAAAGGAACCCCAGATTTTAAAAACGTTACTCACATCTAAACCGGAAGTTCTGGTCTCGGAACCGGAAATTATGAACTCTGGCCCAGAAAGCCCTGAAACTCTGATATCTGAACCCGAAATTGCGTCTTTTCAAGTTGAGACGATTTTATCGGAACCTCACGACTACGACGAAAACCAAGATGATGATGGAGACGCAGATATGCATAAAAATCAGAGCCAAAACTACGACACTGTCGATATGGACTCTGAAAATGAAATAGAAATTGCCCGACAGCAGGAGCATGTCGATGAGAATGAGGAAAATCCAGAAGAAGATGACAATAATCATCAAGACGACGAAAATGACCCTGAAGGAACTGAAAAAGTGGTTGAAAATGAAAACGAGAAAGACCTATGTCCTCAAGATTCAGTTCCAGGTGAGGAAGGCAACGGGAGTATGGATGTTGATGATAATGATGAAGCCAAAGACGATGAACCCAACAATGAGGAGGACGAAGAAGGAAATGAAGATGCTGAGAATGAAGTGGATGCCAGCCAGGCTGAAGGTCCCGAAGACGAAGAAGACCCACCAGTCGGACTTACACCTCAAGTCGAACTGAATGATGACTTGCAGAACAATTCCAACACATTCAACAGTGAAGCCAACGAAGACGAAGAAGAACTAGATGAAAACGCAGACCTAAATGATACCGCTGATGGCGCACCCAAACCGCTCAATTCTGATACAACATACGTCACAAACGAACAAAGAAACTTCATCAAACGGTTTCGTGATATTATTCTTCAGATCAACACGAAAAAATGCTTGTGCTGCGACAAGGAGTATCCTCGCAGAAAAGCTGTTATTCAACATCTACAGAAAAACGGACACAAAGTTCCAAAACACACATGCTACAATTGTGTCGTCACTTTTACTCATATTGGCGCGCTACTAAGCCATATGAGACAAAACTTATGCACCGATCTATGGAAGATCATCTACGACGAGAACGGTATCACTAGCGATATGATCGTTGAAGAGCCCAAGGGAACCAAAATTCAAGCCAAAGATATTTTCAATGCTAAATCTTATGCTTGTAGATTGTGTCCGGCTAAATTCCAGCTGAAGCAATCTATTATGAAGCATGTCTCCGAGTTCCATGAAGATGGCCAGTCTTCAGTTCCACTCGGCTGCATCCATTGCGGTGCCACCTTCAAAGACAAATCTTTTCTTAAGAAACATACTCGCAACGGCGACTGTACAGTTTACATCCATTGTGACCTGTGCTCTGAACAATTCACTAACATGCAAGACTTTAATGATCATGCGTTGGCAGTTCACGCTGAGCACTTTGTCAAAACTGAAAACCAGAGCACCGATGGACGCCTCACAGACTGTTATCTTTGCGGTACGAAGACTAGCAGCTATCCAAATCTGCTCAAACATTTGAAAGCGGAGCATGACGAAGTCCCGCAACACTGCCGGTGTTGTGGCGTCAAGTTTGAGCAACCTGTTGAACTAAACAAACACATGTATCTGGAGCATCCTGGCGCGACTCCGGACATGCCCGCCGCGCATCCAGACATGTCACTCGTCAAAGAAGAAGCCGAGGAGTACCACTACTCATGCACAGAGTGTAATGCAATATTTGAAACTGTAGACGCGTGGACTGACCACCAAGTAGCCGAGCACAACCAAGTGGCACATCATTGCGATCAGTGTGAAAAGAAGTTCCTGAGACCCTCCGAGCTTGCAGAGCACAAAAATACTCACCTTAGAGTCAAGTTCTATCCCTGCAACTTATGCTCAAATTCGTACAGCACCGCACAAAAGTTGTCTGATCATGTCCAAAACGTTCATCCTGGAACTCAGGCTAATACAGAAAATGAGTTTTTCTGCGACATTTGTATTCGAGCTTTCAAAAGCCGCCAGGCGTACTCGAATCATATGCGCATCCATGCCAAAGTACCGACAACCAATAGAAAACCCGGTGAACCGAAAGGTTTCGATCCACGCATCATTGGCAAACCCATCAAGCAGTACACGGTATCAAATGTGGTTCCTCCTGGCTTTATTAATTTCAAGCCAAATGCCGTTGTTCCTAATGCTCCTTATTCGTGCGATATTTGCGGGAAAGGCTTCATGCATAAGAAAAATATTTGGAAGCACAAAAAAGTACTGCATGCTGATATAATAAACGACCGGAATGACAGCGAAGAGAATACAATGCACGCATCTACAGAAGAAGATGAATATAATGTTGATGAAAACGGGGCAGCACTATCAACTCCACAATTCAATAGTTTCAATTTTACAAATTTCACAAATAATGCAGTGCAGTCTCAGTCTGATCCTATGCCATTTTCTTGCGAATTGTGTTCCAAGCGGTTTCCGCTTAGAACTAGTCTGATAAAGCACAAACGCGCTAAGCATGGAATCACAAATGCAAATCCTGGCGGCCATGCCGAAACTCAAGCACAAGCTTCCCCCGTTGATGGCCAAAGTGGTGGTAGATCGAGCTGTACCATTTGCAAAATTACGTTTGCAGACAAAAAATCTTACTACCGACACAGGAAAAACGTTCACAAATCAGCGACTCAAATGTGCAAGATTTGTGGCAAGCCCCTCAATTCCACGCAGGAACTGTACGAACATCTGAAGGCAGCTCACGCCAGGGAGTTGCTGGGTTACAACGCCAATCAAAGCACGAGTAAGGCTCAGGACGTATCGCAAGATATGGACGGCGAGTTTGACAACGATCAAGAATTAGCAGATCCCAGCGTGGATTATCAAGCACGGTATCCGTGCGATACTTGTGGCAAACAGTTTGTAGGACTGCTCTCGTTGCAAAATCACCAGTGTATAAATCAATTACCTTCGCAACCACAGACGTTCGATTGTGAGATCTGTCACAAAAGCTACACTTCTATTGCCGCGCTGAAGAGTCATCGCGGCTGGCACCTACGCTCGCCCGATGGCAAGGCGGCCGCTAACAACAGCGGTCTTTGGATGCCGCAACACAAGGTCACCAGCAAGGTCAGCAAACACGAAGTCGTAGAAACCGCCACACCGGCTGCAACAACATCGTCTGTTATGTCAACTCGGCTGAACTCGACGCCTGCATCTGTGGCCAAACGAAGACTACCTCCCGAAGTAGAAGTTACTGTCGTGAATCCGAACAAAAAGATGCGTTCGGACGACTCGGTCGAGATCGATCAGCAAAACGATGGCTCCGAAGGCAGGTACTGTACGATATGTGAGAAAGATTTTACGAAACGCGCGGCATATCAACGTCACATGGACGAGGTTCATCAACCGAATTCTGTTTTCTGTCCGGTCTGTGATAAGAGTTTTACGAGGAAATCTACGCTGATCGTGCACATGAGAAAGCATTACGGCGGTGACGGAGAGGGTAGTTCCTCGACAACAGCACAAGTAGACGAGGATGAAGGGTTTTCGTGTGATCTCTGCGGCGCGCAGTACGATACCGAGAATGCTTTAAGGGCGCATCGAATCAGGCATCACGGAGAGGAATCTGGAGAATCAGAGGATGATGGCCAAGTGCCGATCGCTCAAGCCGGGGAGTTCACGTGCGGACAGTGCGGCGACGGCGTTGCTACTGCGCGAGATTTGATCACACATCGTGCGATACATTCAACACCTACGAAGTTCTTCTGCAACATTTGCAAAGTGTATTTCGTGAGAGCATTAGATCTGTCCACCCACACGCGTGCGCGGCATGCGGACAATGAGAAAGTGTTCTTCCCGTGCGCGATGTGTGACCGCTTCTACATGAACAAGAAGAGCTTGCAACGTCACATCGACATGGCACACTGA
- Protein Sequence
- MTVNYDRVCRLCLSSRGELLPIFPTTSSDDMEPPILASKIKDCVAVEISENDDLPTNVCRKCVDNVNNWHLFKSVCSKTQNKLLSLTRKDGSLLEEVQIKSEPLFSEEAYDDGVVIDGSYPESENAGFSSKLQPEGPPILASLGLTPRSDKGMESEKDEEEEYDEEAKVPQPVKVPHMPEVSITVMRPTGETLQSRQGIQQIASKDCLICGRSYRYSHNARRHELTSHKFDRYTNKVNKKSHSRMQPKLRPNPFNPKARLMPNPISHKMQLLPKMMPRLMPQKIITPPKPIPIKSSKTPQNNLPYPLRIKALKDLQIKKKEPQILKTLLTSKPEVLVSEPEIMNSGPESPETLISEPEIASFQVETILSEPHDYDENQDDDGDADMHKNQSQNYDTVDMDSENEIEIARQQEHVDENEENPEEDDNNHQDDENDPEGTEKVVENENEKDLCPQDSVPGEEGNGSMDVDDNDEAKDDEPNNEEDEEGNEDAENEVDASQAEGPEDEEDPPVGLTPQVELNDDLQNNSNTFNSEANEDEEELDENADLNDTADGAPKPLNSDTTYVTNEQRNFIKRFRDIILQINTKKCLCCDKEYPRRKAVIQHLQKNGHKVPKHTCYNCVVTFTHIGALLSHMRQNLCTDLWKIIYDENGITSDMIVEEPKGTKIQAKDIFNAKSYACRLCPAKFQLKQSIMKHVSEFHEDGQSSVPLGCIHCGATFKDKSFLKKHTRNGDCTVYIHCDLCSEQFTNMQDFNDHALAVHAEHFVKTENQSTDGRLTDCYLCGTKTSSYPNLLKHLKAEHDEVPQHCRCCGVKFEQPVELNKHMYLEHPGATPDMPAAHPDMSLVKEEAEEYHYSCTECNAIFETVDAWTDHQVAEHNQVAHHCDQCEKKFLRPSELAEHKNTHLRVKFYPCNLCSNSYSTAQKLSDHVQNVHPGTQANTENEFFCDICIRAFKSRQAYSNHMRIHAKVPTTNRKPGEPKGFDPRIIGKPIKQYTVSNVVPPGFINFKPNAVVPNAPYSCDICGKGFMHKKNIWKHKKVLHADIINDRNDSEENTMHASTEEDEYNVDENGAALSTPQFNSFNFTNFTNNAVQSQSDPMPFSCELCSKRFPLRTSLIKHKRAKHGITNANPGGHAETQAQASPVDGQSGGRSSCTICKITFADKKSYYRHRKNVHKSATQMCKICGKPLNSTQELYEHLKAAHARELLGYNANQSTSKAQDVSQDMDGEFDNDQELADPSVDYQARYPCDTCGKQFVGLLSLQNHQCINQLPSQPQTFDCEICHKSYTSIAALKSHRGWHLRSPDGKAAANNSGLWMPQHKVTSKVSKHEVVETATPAATTSSVMSTRLNSTPASVAKRRLPPEVEVTVVNPNKKMRSDDSVEIDQQNDGSEGRYCTICEKDFTKRAAYQRHMDEVHQPNSVFCPVCDKSFTRKSTLIVHMRKHYGGDGEGSSSTTAQVDEDEGFSCDLCGAQYDTENALRAHRIRHHGEESGESEDDGQVPIAQAGEFTCGQCGDGVATARDLITHRAIHSTPTKFFCNICKVYFVRALDLSTHTRARHADNEKVFFPCAMCDRFYMNKKSLQRHIDMAH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00632966;
- 90% Identity
- iTF_00632966;
- 80% Identity
- -