Basic Information

Insect: Eulithis testata
Gene Symbol: -
Assembly: GCA_947507515.1
Location: OX382207.1:1881734-1886829[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.00012 0.0075 16.9 0.8 1 23 137 159 137 159 0.97

2 13 0.00012 0.0075 16.9 2.1 1 23 163 185 163 185 0.95

3 13 0.29 18 6.3 0.7 2 23 189 210 189 210 0.97

4 13 7.7e-06 0.00047 20.7 0.7 1 23 230 252 230 252 0.98

5 13 0.00072 0.044 14.4 0.3 1 23 259 281 259 281 0.97

6 13 1.3e-06 8e-05 23.1 1.6 1 23 287 309 287 309 0.99

7 13 8.9e-06 0.00054 20.5 1.6 2 23 316 337 315 337 0.97

8 13 1.5e-07 9.3e-06 26.0 0.4 1 23 343 365 343 365 0.96

9 13 2.3e-05 0.0014 19.2 3.5 1 23 371 393 371 393 0.96

10 13 3.6e-06 0.00022 21.7 0.5 1 23 399 421 399 421 0.98

11 13 0.00031 0.019 15.6 5.2 1 23 427 449 427 449 0.98

12 13 3e-06 0.00018 21.9 2.6 1 23 455 477 455 477 0.99

13 13 0.00023 0.014 16.0 0.6 1 20 483 502 483 505 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.00012	0.0075	16.9	0.8	1	23	137	159	137	159	0.97
2	13	0.00012	0.0075	16.9	2.1	1	23	163	185	163	185	0.95
3	13	0.29	18	6.3	0.7	2	23	189	210	189	210	0.97
4	13	7.7e-06	0.00047	20.7	0.7	1	23	230	252	230	252	0.98
5	13	0.00072	0.044	14.4	0.3	1	23	259	281	259	281	0.97
6	13	1.3e-06	8e-05	23.1	1.6	1	23	287	309	287	309	0.99
7	13	8.9e-06	0.00054	20.5	1.6	2	23	316	337	315	337	0.97
8	13	1.5e-07	9.3e-06	26.0	0.4	1	23	343	365	343	365	0.96
9	13	2.3e-05	0.0014	19.2	3.5	1	23	371	393	371	393	0.96
10	13	3.6e-06	0.00022	21.7	0.5	1	23	399	421	399	421	0.98
11	13	0.00031	0.019	15.6	5.2	1	23	427	449	427	449	0.98
12	13	3e-06	0.00018	21.9	2.6	1	23	455	477	455	477	0.99
13	13	0.00023	0.014	16.0	0.6	1	20	483	502	483	505	0.93

Sequence Information

Coding Sequence: ATGTTGGACTTGAACACATCGTGTAGGACGTGTATGAAGACTAATGTTCCTCTGATTCCCTTGTACGAAGCAGTGAAAATTGATGAGAACAGCAACATTCAATTATTACAACTACTATTGGAATGTGCTGCTATACATGTTAAAAATGATGATTATCTACCACAAAATCTTTGTGAGGATTGCGTCAAAATACTAAAAATATCATACACATTCCGTAGTCGAGCAGCAAGAGCAGAGGAACAGTTTAAACTCCTCATAAAAGAGCAGGTAAAACAGGAAATCAAAGCGGAAAGTGATCACAACTACTTTGAAACTGATGAATTCTCATTTGATAGTTCAGAGCCAGTCAAATCAGAGCCTGATGAAAAATGTAATAATCGAATTATAAATAAAGAAAATAAGAAAAGTTACACCTGCCCTGAATGTGACAAAAGCTATATAAAAGAAAAAAAATACCTGAAGCATTTAGAACTCCACGCATCAGAATACTTGTGTGCTCACTGCAAGAAACCATTTGTAACGGAAGAGTCATTGCAAAAGCATTTGTTTAAACATAACATCAACAGATGCCACGTATGTGGTGACCTGTTTGATGATGAGGCTCTGTTTCTCCAACACACCACAACCCATAATCCTCCGACCATCAAGAATGAAGAAATTGATGAGCCATGTGAACAATCACCATCCTACCCGTGCAATGAATGTGATAGAATTTTTAATAATTCAAGATCTCTGGCACTGCATAGGAAAAAGCATAAACAATCACCTTCTAGATACTCGTGTGATGTTTGCGGTAAAGAGTTTTTATCAAAAGCATTAGTTAAACGACATGTGAAACTGCATGTTCAGGATAAGACGTTCAAATGTACCACATGTTCGAGAAGTTATTCAAGATTGGATCAGCTAAATGTTCACATGAAGGTCCATGATGGGCAGAAGCCTAAAGTTTGTCCATTCTGTAATAAAGCATTCGCTCAACTCTGCAGTCTCAAAGACCACATCCGCACGCACACTGGAGAAACGCCATATCTATGCTCGGAGTGTGGCCGAGGGTTTGCGAACAGCTCTAACTTGAGACAGCACATGCTCCGGCATACTGGAGTCAAGCCGCATGCTTGCAAACTATGCCCAAAGTCATTCTGTACTAAAGGTCAAATGACAGCTCACCTATTGACACACACAAACGAGCATCCTTACGAGTGCGATAAATGTGGAGCGACCTTCACCAAGCTCGCGTCACTCAAGAAACACACCATGATACACACGGGACAGCGTCCGTTTAGCTGTGACACCTGCCCTGTGAGTTTCACATGCAAGGATCACTTGAAACGTCACCAGCGTATCCACACGGGCGAGAAGCCGTACAAGTGTCGTTACTGCCAGCGCGCCTTCACGCAGAGCAACGATCTCGTCAAACACACACGCTCGCATATCGGACAGAACATATACGATTGCTCTGTCTGCGGTGAGAGGTTTCGATTGAAGACCGAGTTAAAAAAACACTATCCAGTCCATTTCAACGATGATGGAACTATAAAGGAACTCACCTCAAACAAAGACACAGACATACAACCAGACACAAACACACAAACAGATACATACACTAACACATCTAGAACACCTACAGATATAACAACAGTAGATGAACGCACACAAACACATTTATTACGAGAATTGCAGACTCATATGCCTAATATAGATAATGAAACGCAAATGGACATGAAGAAAATAGAAATAGATAAATTTATGATTACTATTAATGATGATAATGGAATGGTTGCTATTAATATTGAGCCTGAGACTCGGTAG
Protein Sequence: MLDLNTSCRTCMKTNVPLIPLYEAVKIDENSNIQLLQLLLECAAIHVKNDDYLPQNLCEDCVKILKISYTFRSRAARAEEQFKLLIKEQVKQEIKAESDHNYFETDEFSFDSSEPVKSEPDEKCNNRIINKENKKSYTCPECDKSYIKEKKYLKHLELHASEYLCAHCKKPFVTEESLQKHLFKHNINRCHVCGDLFDDEALFLQHTTTHNPPTIKNEEIDEPCEQSPSYPCNECDRIFNNSRSLALHRKKHKQSPSRYSCDVCGKEFLSKALVKRHVKLHVQDKTFKCTTCSRSYSRLDQLNVHMKVHDGQKPKVCPFCNKAFAQLCSLKDHIRTHTGETPYLCSECGRGFANSSNLRQHMLRHTGVKPHACKLCPKSFCTKGQMTAHLLTHTNEHPYECDKCGATFTKLASLKKHTMIHTGQRPFSCDTCPVSFTCKDHLKRHQRIHTGEKPYKCRYCQRAFTQSNDLVKHTRSHIGQNIYDCSVCGERFRLKTELKKHYPVHFNDDGTIKELTSNKDTDIQPDTNTQTDTYTNTSRTPTDITTVDERTQTHLLRELQTHMPNIDNETQMDMKKIEIDKFMITINDDNGMVAINIEPETR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -