Basic Information

Insect: Eulithis testata
Gene Symbol: -
Assembly: GCA_947507515.1
Location: OX382216.1:3571105-3574095[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 1.3e-06 8e-05 23.1 2.1 1 23 194 216 194 216 0.98

2 14 0.17 10 7.0 6.8 1 23 254 276 254 276 0.98

3 14 0.00063 0.038 14.6 7.9 1 23 283 306 283 306 0.97

4 14 0.0019 0.11 13.1 0.4 1 23 312 334 312 334 0.98

5 14 4.1e-05 0.0025 18.4 4.0 1 23 340 362 340 362 0.95

6 14 3.1e-06 0.00019 21.9 0.2 1 23 368 390 368 390 0.97

7 14 1.1e-07 6.9e-06 26.4 1.2 1 23 396 418 396 418 0.98

8 14 3.5e-07 2.1e-05 24.9 2.8 1 23 425 448 425 448 0.97

9 14 1e-06 6.1e-05 23.5 2.0 1 23 454 476 454 476 0.98

10 14 0.00059 0.036 14.7 2.0 1 23 482 504 482 504 0.97

11 14 1.4e-06 8.8e-05 22.9 0.6 1 23 510 532 510 532 0.99

12 14 4e-06 0.00024 21.6 0.3 1 23 538 561 538 561 0.97

13 14 0.0003 0.018 15.6 3.4 2 23 580 602 579 602 0.97

14 14 2.1e-05 0.0013 19.3 2.5 1 23 609 631 609 631 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	1.3e-06	8e-05	23.1	2.1	1	23	194	216	194	216	0.98
2	14	0.17	10	7.0	6.8	1	23	254	276	254	276	0.98
3	14	0.00063	0.038	14.6	7.9	1	23	283	306	283	306	0.97
4	14	0.0019	0.11	13.1	0.4	1	23	312	334	312	334	0.98
5	14	4.1e-05	0.0025	18.4	4.0	1	23	340	362	340	362	0.95
6	14	3.1e-06	0.00019	21.9	0.2	1	23	368	390	368	390	0.97
7	14	1.1e-07	6.9e-06	26.4	1.2	1	23	396	418	396	418	0.98
8	14	3.5e-07	2.1e-05	24.9	2.8	1	23	425	448	425	448	0.97
9	14	1e-06	6.1e-05	23.5	2.0	1	23	454	476	454	476	0.98
10	14	0.00059	0.036	14.7	2.0	1	23	482	504	482	504	0.97
11	14	1.4e-06	8.8e-05	22.9	0.6	1	23	510	532	510	532	0.99
12	14	4e-06	0.00024	21.6	0.3	1	23	538	561	538	561	0.97
13	14	0.0003	0.018	15.6	3.4	2	23	580	602	579	602	0.97
14	14	2.1e-05	0.0013	19.3	2.5	1	23	609	631	609	631	0.97

Sequence Information

Coding Sequence: ATGCTCATGATGTTTCAGTCAGACACAGAACATGGAGCTGATATGATATGCTACATCTGTTACTCCTATCTGAAGAGATGCTATACATTTTCCCAAATGGTGCAAAGGTCTGATGTCATTCTGAAGACCCTCTGCGATGAAGGGTTTGAGGCAACACAAGAATCACTGTCATTGACGAACATTGACGTAATAGTGACATTACCAATCTTGTCAGTGAGCACAGTCACGTACCTGTCAACTGATAACTATGATTACACAGATACAGTAGGTTCTGTAAAAGAAGAAACTATGGCCGATGCGTCTGATGTCGAACAAACGATGGAAATAGAAATAGATAATGACGAGCTGAATTATACAGAAAATGAAGAAATGTCAACTGAAAATGAACATAATGAAGAAGATTTTAAAGGAAGATACGGGGTAAATGACATTAAGAACATATTGAATGATAATAAGATTAAATTAGAAAGCAGTTACGCATCTGAAGAAAGCAACGACTCAATATGTTATGATGATGCACGCGATAATAAAGCACATCAGAAAATTGAGAAACATGTGCTAAATCACACAAATAAAAGATTTACTTGCAAAAACTGCAATAAAAAATTCGCAACACGTAAATCTTTGAATGCACACATGACAGTTCACATCGAAGAAAACATTACCACTAAATCTTTAAAAGATGAATCTGATTTGCGTAAAACTGAAGCAACAATCCACAAAAACTTAAAGCTTTCTGACGAGCCAAAGACATATGCATATGCATGCAGCCAATGTGACAAAAGATACCATTTTAAACGTAACTTGGACTGTCACATGCAAACGCACACCGATAGAATGAACGAACATACTTGCAACAAATGCGGTAAACATTTCGCTAGTAAAGATAGCTTGCAGTGCCACTTGCGTACAACTCACTCGGAAAACAGGCCGTTTCCGTGCGCTGTGTGTTCTAAAGCATTCAAATTAGGAAAACAATTAAAAGAACATTTTAGAATCCACACCGGAGAGAAACCATTTGCTTGCGATTTGTGCAATAAAAAATTCACCCAAAGCAGCTCCCTCCGCCATCATAAATTTATTCACAGCCGTCATAAGTTATACGTCTGCGACTTGTGTGGTAAACCACTAACAAGCAAATATAATTTGAAACTTCACATGCTGGCTCATAAAGATGTAAAAGCGTACGCCTGCGATCAATGTGACAAAACATTCAATGTTCAAAAAAATCTAAAAAGACATATGGAAACGCATAGCGCTAAAGTGTACGAACATACCTGCGATATGTGCGGTAAAGTGTTCTCCAGTAAAGAAAATATGCGTTACCATATGCGTATGACTCACACTGACTTAAAACCATTTATGTGTCTGCACTGCGACAAAGGATTTAAGCGGAAAGTACAACTGAATGAACATATTAGGATACACACCAAAGAAAAACCGTATGCCTGCGATGTATGTGGTATGGAATTTACACAAAAGAGCTCCTGCAATACTCATAAAAGAATTCACACCAACCAAAAGCCTTACACATGTGACGTATGCGATGCAAGGTTCAGACATTTAGGAGCTTTGAAAGTTCATATAAGAACTCATACCGGAGAAAGACCATATGTTTGTGATGAGTGCGATCAAAAGTTTTCAGTTAGAGATCAATTACGTCTTCATATGATAAAATTACACGGTAAAGAGCTAAAATTACACGGTAAAGAGCTCACTGCTAATAAAGATAAAAAAACATGTGATAAATGCTCTAAATTGTTCTCATCAAACAAAACGTTGCGGGCCCACACAAGAAGATTCCACGATGAAACCGGGGAAAAGTACTCATGTGCCAAATGCTCTAGGACTTTTTCATTGAAAAGTGATTTGAAAAGACATACCAAAGAGCATAACAAACCAGGAGTTATTGTAAAATTTATAGATACACAGTTATTGTAA
Protein Sequence: MLMMFQSDTEHGADMICYICYSYLKRCYTFSQMVQRSDVILKTLCDEGFEATQESLSLTNIDVIVTLPILSVSTVTYLSTDNYDYTDTVGSVKEETMADASDVEQTMEIEIDNDELNYTENEEMSTENEHNEEDFKGRYGVNDIKNILNDNKIKLESSYASEESNDSICYDDARDNKAHQKIEKHVLNHTNKRFTCKNCNKKFATRKSLNAHMTVHIEENITTKSLKDESDLRKTEATIHKNLKLSDEPKTYAYACSQCDKRYHFKRNLDCHMQTHTDRMNEHTCNKCGKHFASKDSLQCHLRTTHSENRPFPCAVCSKAFKLGKQLKEHFRIHTGEKPFACDLCNKKFTQSSSLRHHKFIHSRHKLYVCDLCGKPLTSKYNLKLHMLAHKDVKAYACDQCDKTFNVQKNLKRHMETHSAKVYEHTCDMCGKVFSSKENMRYHMRMTHTDLKPFMCLHCDKGFKRKVQLNEHIRIHTKEKPYACDVCGMEFTQKSSCNTHKRIHTNQKPYTCDVCDARFRHLGALKVHIRTHTGERPYVCDECDQKFSVRDQLRLHMIKLHGKELKLHGKELTANKDKKTCDKCSKLFSSNKTLRAHTRRFHDETGEKYSCAKCSRTFSLKSDLKRHTKEHNKPGVIVKFIDTQLL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -