Basic Information

Insect: Eulithis testata
Gene Symbol: -
Assembly: GCA_947507515.1
Location: OX382219.1:5245224-5249338[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.074 4.5 8.1 3.0 1 23 163 185 163 185 0.97

2 15 5.9e-06 0.00036 21.0 0.9 1 23 191 214 191 214 0.92

3 15 0.12 7.6 7.4 1.3 2 23 222 243 221 243 0.96

4 15 0.00024 0.015 16.0 2.7 1 23 251 273 251 273 0.96

5 15 0.00011 0.0066 17.0 4.2 1 23 282 304 282 304 0.96

6 15 1.9e-07 1.2e-05 25.7 2.6 1 23 310 332 310 332 0.99

7 15 0.00034 0.021 15.5 3.2 1 23 338 360 338 360 0.97

8 15 1.2e-06 7.5e-05 23.2 1.0 1 23 366 388 366 388 0.98

9 15 3.8e-05 0.0023 18.5 2.8 1 23 394 416 394 416 0.97

10 15 4e-06 0.00024 21.6 0.2 1 23 422 444 422 444 0.98

11 15 1.3e-06 7.6e-05 23.1 6.6 1 23 450 472 450 472 0.98

12 15 4.6e-09 2.8e-07 30.8 0.6 1 23 478 500 478 500 0.98

13 15 6e-06 0.00037 21.0 0.6 1 23 506 528 506 528 0.98

14 15 9.4e-07 5.7e-05 23.5 0.5 1 23 534 557 534 557 0.97

15 15 1.8e-05 0.0011 19.5 0.2 1 23 563 585 563 585 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.074	4.5	8.1	3.0	1	23	163	185	163	185	0.97
2	15	5.9e-06	0.00036	21.0	0.9	1	23	191	214	191	214	0.92
3	15	0.12	7.6	7.4	1.3	2	23	222	243	221	243	0.96
4	15	0.00024	0.015	16.0	2.7	1	23	251	273	251	273	0.96
5	15	0.00011	0.0066	17.0	4.2	1	23	282	304	282	304	0.96
6	15	1.9e-07	1.2e-05	25.7	2.6	1	23	310	332	310	332	0.99
7	15	0.00034	0.021	15.5	3.2	1	23	338	360	338	360	0.97
8	15	1.2e-06	7.5e-05	23.2	1.0	1	23	366	388	366	388	0.98
9	15	3.8e-05	0.0023	18.5	2.8	1	23	394	416	394	416	0.97
10	15	4e-06	0.00024	21.6	0.2	1	23	422	444	422	444	0.98
11	15	1.3e-06	7.6e-05	23.1	6.6	1	23	450	472	450	472	0.98
12	15	4.6e-09	2.8e-07	30.8	0.6	1	23	478	500	478	500	0.98
13	15	6e-06	0.00037	21.0	0.6	1	23	506	528	506	528	0.98
14	15	9.4e-07	5.7e-05	23.5	0.5	1	23	534	557	534	557	0.97
15	15	1.8e-05	0.0011	19.5	0.2	1	23	563	585	563	585	0.98

Sequence Information

Coding Sequence: ATGAAACCGGAAGTGAAATTAAACAACCCGGAAGTTAAAATAAACGGCTGCTACCCGGGCCGGGTAGCAGCCGTGCTATGTGCCGGCTGCTACCCGGCCCGGGCACATAGCACTACCTTCAGGCCGGAGTCAACTAAAGTGTTTCAGCTGTCGGAAGACGTCCCCAGTATGCTGTTCCTCAACTTGACCATGTCAGTAGTCCAACACACTTCCTTTGATCTCAATGAGGCAGTCAAAGAAGAGCTGTCAGAATCTACTGATTATTTCGGCGATTTTGATGATGGTGACAAATTTGCCAATGATGAAGCTAGAAACTCACTTCGGAACTCGAATACAGTTGTCAGAATTGACCTCAGGGAGATAAAAACAGAAAACACTGAAATGTATACCAAAAATGAAGAGGGCTTGGTCCAGACAACTGATAGTAACTCATATGAGAGTGAGAAAAACTACACAGAAATTCACGACAAAAGTACTAATTTATGTTATTTTTGTGTTACATGCAACAAGAAGCACGTCACGAAAAAAGCGTTGGATCAACATATGAAAGTGCACGATCAAAGTCGCACTTATGTATGTGACATCTGCGATTATCGATTCAATACAAAGGCTAACTTAAAAACTCACAAAGATAACTTACATCGCACTCAAACTGAAACAGTTTCGTGCACCATTTGTCACAAACTTATGAACAGTCCACAAATATTAAAACGAcacatgaaaatccattcggagaaaccgccgcgaagtcacgcctgtgataaatgcgagttaaagttctctgatagaagtaccttagtaaggcacaagacaacacacatagaaaacgtaccaggaaaaccacatgcttgccaaatatgtcacaaaacattctcggttatatactacctaaaaagtcatatgaaactgcacaccggggaaaggccatattcctgcgaacgatgcggcaaagcgttcacactaaacagccatttaaaaagtcacatcagaacacacactggagagaaaccctacgcttgtagtaaatgcgataagagatactccagtctcgctcacatgaaatatcacatcacaaagcactcgggtgaaaaaggtttcgtctgtgatatatgtcagaaagcattctctgcaaatagccattggaaaagtcatatgaggatacacagtggcgaaaaaccatttgcctgtgatatgtgtgacaaaaagttcaccggtcataccaacctgaaattacacaagcgaatacatacgggtgtgaaaccgcacgtctgtgatatctgcggaaaagcgtttgcacaaaagtctgttatgatagtacacgttaggacgcatacaggcgagaagccttttgcatgtcacagatgtggaaagacattcacaatgtccacgcacttgcgaactcacatgcgaacacataccggggagaaaccgtacgcatgcgagatatgcgggaaaacgttcgcagacaactcccgtttaaaacgacacatgaggacacacacaggcgaaagaccctacccatgtactatgtgcgataaatcattcgccgactacactaacatgaaaactcatttggtaacacatactggggaaaagccctatgcttgtgacagatgcggcaagactttcacgcaacaaggcacgatgaacaagcacataaaaattgttcatctgaaagaaaggccctatgcctgtaatatgtgtccaaaagcctacgccaaacgacaggcgttgaaaattcatgtgcgaacgcatactggtgaaaggccatgcAAAATAAATTAA
Protein Sequence: MKPEVKLNNPEVKINGCYPGRVAAVLCAGCYPARAHSTTFRPESTKVFQLSEDVPSMLFLNLTMSVVQHTSFDLNEAVKEELSESTDYFGDFDDGDKFANDEARNSLRNSNTVVRIDLREIKTENTEMYTKNEEGLVQTTDSNSYESEKNYTEIHDKSTNLCYFCVTCNKKHVTKKALDQHMKVHDQSRTYVCDICDYRFNTKANLKTHKDNLHRTQTETVSCTICHKLMNSPQILKRHMKIHSEKPPRSHACDKCELKFSDRSTLVRHKTTHIENVPGKPHACQICHKTFSVIYYLKSHMKLHTGERPYSCERCGKAFTLNSHLKSHIRTHTGEKPYACSKCDKRYSSLAHMKYHITKHSGEKGFVCDICQKAFSANSHWKSHMRIHSGEKPFACDMCDKKFTGHTNLKLHKRIHTGVKPHVCDICGKAFAQKSVMIVHVRTHTGEKPFACHRCGKTFTMSTHLRTHMRTHTGEKPYACEICGKTFADNSRLKRHMRTHTGERPYPCTMCDKSFADYTNMKTHLVTHTGEKPYACDRCGKTFTQQGTMNKHIKIVHLKERPYACNMCPKAYAKRQALKIHVRTHTGERPCKIN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00737672;
90% Identity: -
80% Identity: -