Etes018616.1
Basic Information
- Insect
- Eulithis testata
- Gene Symbol
- -
- Assembly
- GCA_947507515.1
- Location
- OX382222.1:5117308-5120048[+]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 10 0.027 26 5.2 1.4 5 38 64 92 60 96 0.83 2 10 0.0002 0.19 12.0 2.7 5 30 91 118 87 129 0.76 3 10 0.025 24 5.3 0.4 14 38 126 147 116 152 0.82 4 10 0.032 30 4.9 2.1 18 44 158 181 148 181 0.90 5 10 0.061 58 4.0 1.1 18 41 187 207 182 209 0.78 6 10 0.0028 2.6 8.3 0.8 4 40 202 234 200 243 0.86 7 10 0.11 1.1e+02 3.2 0.2 18 32 243 257 240 265 0.75 8 10 1.8 1.7e+03 -0.7 3.8 15 38 268 288 260 292 0.80 9 10 0.00047 0.44 10.8 1.0 16 41 297 319 287 320 0.89 10 10 4.3e-05 0.04 14.1 1.3 12 44 321 350 318 350 0.92
Sequence Information
- Coding Sequence
- ATGTCTAACATTTTCTTTATTTACAGAATAAAGTTGGAACTTGAATTCGAAGATAAACGTTGGCAGGAGTCATCTCAAAACATAAAAGACGAGGGCATTTTGCCCGAAGATGCTGTCAAAATAGAAACTTTGATTGATCAGGGTTACGCAGAAGAAAATGAGAACTCTCTTGACAGTTCTGGCGTATCGGATCACTTTCTGGCGTGCGGTGTCAGAAAAAACCAATGTGATATTTGCTTGAAATCATTCTCAAACAACGCGAATCTACAAAGACACAAACGTATTCACAGTAGAACAAAACTTCAATGCAAAATATGCACCAAGCAATATGTCAGTCAAGAACTACTAGATAAACATGTATCGAATCATGGCAACACTAATATGTATCCATGTGACGTCTGTGGAAAAGCATTTAAAAGTAATTCCAACTTACAACAACATAAAAAAGTCCATCTTACGATAAAACCTCATAAATGCCCTAAATGTAATCGAAGTTTCGCTATAAAAGCTAATTTTCTTAGACATTTAACTAAAACTTGCAAACCAGACGGAGGCCTAACATGTCCGGTGTGCAAGAAGGAGTTTAAGAAGAAATATTCACTAAAATCACATCTAAGAAAGCATGACACGGATAAACCGTTCATCTGTGATTTATGTGGACAAGACTTTAAGTACAAAAGTGCGGTCATGAGACATCTGCAATGGCATGCCGGTTATAGACCATGCAAGTGTCCGTTCTGTGACAAAACGTTCACTCACTCCGGACTGATCAAGCCACATTTAAGATCCCACACCGGAGAGAAACCGTTCCAATGCAGTATATGCCTTAAAATGTTCACACACAAACATAACATGGAACGGCATAAGATCAATCATGGTAGGATCAAGCGGTTAGTCTGTGATATTTGTAACAAAAAGTTTCCCCGGGAAAGTAGACTGATCTATCACATGAAAACTCATACAACTGAGAAGTTTTTTGATTGTGGGATGTGTGATAAGAAATTTACCCATAAGAGTAATGTTATAAGACATTATGAGAGGAAACACCCGGGGTTTAAGTATGATGGGAAAGATACGGATGCTTCTGTGGCTTTGAGGGTTTGGGAGAGGGTTAAGGGCCTATTGCGTCCACATTATGACATATATCAGCAGCCCGAAGAGATTTTGGGGTAA
- Protein Sequence
- MSNIFFIYRIKLELEFEDKRWQESSQNIKDEGILPEDAVKIETLIDQGYAEENENSLDSSGVSDHFLACGVRKNQCDICLKSFSNNANLQRHKRIHSRTKLQCKICTKQYVSQELLDKHVSNHGNTNMYPCDVCGKAFKSNSNLQQHKKVHLTIKPHKCPKCNRSFAIKANFLRHLTKTCKPDGGLTCPVCKKEFKKKYSLKSHLRKHDTDKPFICDLCGQDFKYKSAVMRHLQWHAGYRPCKCPFCDKTFTHSGLIKPHLRSHTGEKPFQCSICLKMFTHKHNMERHKINHGRIKRLVCDICNKKFPRESRLIYHMKTHTTEKFFDCGMCDKKFTHKSNVIRHYERKHPGFKYDGKDTDASVALRVWERVKGLLRPHYDIYQQPEEILG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00686575;
- 90% Identity
- iTF_00686575;
- 80% Identity
- iTF_00686575;