Basic Information

Gene Symbol
SNAPC4
Assembly
GCA_947507515.1
Location
OX382217.1:7625656-7630716[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 5 0.44 4.1e+02 1.4 0.0 12 33 181 204 179 208 0.72
2 5 4e-09 3.8e-06 27.1 0.1 2 44 225 269 224 271 0.94
3 5 3.3e-08 3.1e-05 24.2 0.1 3 44 279 324 277 326 0.93
4 5 1.6e-08 1.5e-05 25.2 0.0 1 45 330 374 330 375 0.96
5 5 1.2e-05 0.011 16.0 0.0 3 45 382 426 380 427 0.95

Sequence Information

Coding Sequence
ATGGCATCGAGCTCACAATCAGCACAACTGCTAAGCGATGCCGAAAAGGAATCGCGGAATAAAATCAACGCGGTAATAGATGCCTACGACGAAGTAATACACGCAAACAGCCTCTTGGAGCAGAAGTACCGTGCGGAAGAGACGATCCTGATGAAAAAACTGCTCGAAGTCCAAGCAGAGCTGCGACGGCAAAAAGAAAAGAAACCGGAGCAGGAGAAACAGGAATTCTTCCGGTATTACAGTGTAGGCAAGCCTTATTTCAAAGATAAAAGCCTGGCTCATCCGCCCGACAATGAAGACACTATACTAATGAAACAGTATCAGATGTATGACTTCTCAAACGTCATGACAGTGTCAGGTTGGACGGTCGGTGACAAAGCTCGTCTCCTATCCGTCCTCATTGATTTGTCTAAAGAAATTGTCAAATCTCAGATCTATACCGAGATAGCTGATTTACAGCGCCTAACATATAAAACCGATGCAATTTTCCTTAAAATCTCCAAGTTGAAAGAGGAGCTTCTATCGTTAAAAAACAAAACATTAGAAGACTTACACGTTAAGGTTGAAAAAGAGTTCGACTGGGAAGAAATTGCCATGAAACTCAACAAACGCCACTCATCTCGAGAGTACAAAGCGATCTGGGAACTTTTCTTCCATCCTAAAATCAACAAACGGGTGTGGGGACCGGAAGAACACGTGAAGTTGCAACGAATCGCAGCCGAGAAACGAATGCAAGACTGGGAGGCTATTGCTAAGGAGTTGAAAACTGGGCGCACAGCGTACCAATGCTTCGTTTACTTCCGAACCAACGTAAACCATGCAGCTAGTGGACGAAAATGGTCCCAACAAGAAATGAACTACTTACAACGGGTCATAGATCTGTACAAAGAGGAGAGTTATATCCCGTGGGGGAAAGTGGCAGCGTCGATGCAGAACAGAACTAAGATTCAATGCTACAATAAGTACATGAGAATGATTGAGGGGAGAAAGGGCAGGTTCTTACCGGAAGAGGACTCGGTTATTCTCAACTTTGTAAATGTCTATGGTACTGACTTCAGAAAGATGTCCAGCTTCCTAACGGGCCGTTCAGCCATCCAGCTCCGAGTCCGTTACAACTTGCTCCTAAAGCTACGAGTTTCCACCACCTGGACCATCGACGATGATAGAAAGCTGCTGCAGATAATGGCTAACCAGGACTGTAGGACCAACTTCTCTACCGCTACTAAACACTTCCCGGGGAAGGATCGCCAGAATATACGGTCTAGATACAACACACTAATAAGATGGACGAAATCCCATCCGCACAGTGATATATCGACAGCTCCAAGACGCGCTGCTCGTCGACTGACCCATGGTGAACCAACAACCAACCTAGTCCTAGCCATAGATAACCTACGCAATAAAATGCAAGCGGAACTAGAATTCAACCAAGACGCAGCAAAGAAGAAGAAGGGTAAGCGATTGACCAGGGAATCCAGCGACAATGCTATCCATGACGCCATAATGTCAACAATATCTACACTAGAAGCTAAAATCCAAGTTAATACCTATATACATAATGTGCAAAAGGCTAAGGTGGAAGATACGTACCAAATGTTGAATGTACAAGAGATCTCATCGACGCCAGAGGAACAGGCGAATGTTTACAACATAAAACACTTCTTATTCCTACTAAACGCAAAGTTAAACAACGAGAAACAATTCTACAACAGTACTATAGGGAAACAATTTAAAGAAGTTGAAGATAAGAAAATAAAGGATGCAAATAGAATTCAAATGAAGTCGTACTCTAAAATGGGGGATTCTTTAATCGAGCCTTGTATTAAACCGACTTTATTCGGCACCATAGCCGGACGCAGACGTTTTTTAATCCCACCAAACTTCGCAACTATAACCGGAAGTCGCGTCATCCTAAACCTTCTATCCAATAATTGCATGAAGGAAAAAAGCGATTTCAACATCAAATCGCTAGTTCGGAAGAACTTGATACTAGATTACCATTTGACACAACTTCGCGAACGATTCATTGACATTTTCACTTGGTCGTATATACTTTCCAACGATCCACCGGAATACTACAAGTTGTATGCCGCTGATATGATTGAGTTGAGGGCTAAAGCTAAGAGGTATGTTCCGAGACCTCTGCCGGATGTACCAGCGGTAACAATACCACCACCACCTCCAAAAAGGTTGAGGATTAGTGCTAAAGAGGCTGGCATTGATGTTAAGACAACGGAGGTAGATCATAGTCACATAGACGTGGAGCATACGTTCGATAGGATCAATGATCCTTTCGATGATGATAATGATGATGTTATTGTGTTATAA
Protein Sequence
MASSSQSAQLLSDAEKESRNKINAVIDAYDEVIHANSLLEQKYRAEETILMKKLLEVQAELRRQKEKKPEQEKQEFFRYYSVGKPYFKDKSLAHPPDNEDTILMKQYQMYDFSNVMTVSGWTVGDKARLLSVLIDLSKEIVKSQIYTEIADLQRLTYKTDAIFLKISKLKEELLSLKNKTLEDLHVKVEKEFDWEEIAMKLNKRHSSREYKAIWELFFHPKINKRVWGPEEHVKLQRIAAEKRMQDWEAIAKELKTGRTAYQCFVYFRTNVNHAASGRKWSQQEMNYLQRVIDLYKEESYIPWGKVAASMQNRTKIQCYNKYMRMIEGRKGRFLPEEDSVILNFVNVYGTDFRKMSSFLTGRSAIQLRVRYNLLLKLRVSTTWTIDDDRKLLQIMANQDCRTNFSTATKHFPGKDRQNIRSRYNTLIRWTKSHPHSDISTAPRRAARRLTHGEPTTNLVLAIDNLRNKMQAELEFNQDAAKKKKGKRLTRESSDNAIHDAIMSTISTLEAKIQVNTYIHNVQKAKVEDTYQMLNVQEISSTPEEQANVYNIKHFLFLLNAKLNNEKQFYNSTIGKQFKEVEDKKIKDANRIQMKSYSKMGDSLIEPCIKPTLFGTIAGRRRFLIPPNFATITGSRVILNLLSNNCMKEKSDFNIKSLVRKNLILDYHLTQLRERFIDIFTWSYILSNDPPEYYKLYAADMIELRAKAKRYVPRPLPDVPAVTIPPPPPKRLRISAKEAGIDVKTTEVDHSHIDVEHTFDRINDPFDDDNDDVIVL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00737429;
90% Identity
-
80% Identity
-