Etes010788.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Eulithis testata
Gene Symbol
CLVS2
Assembly
GCA_947507515.1
Location
OX382209.1:1557557-1564786[-]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 6.5e-10 3.3e-07 30.1 0.0 2 40 24 62 23 66 0.87

Sequence Information

Coding Sequence
ATGGCCAAAACAACTAAAAAAAAAAAAAGCCGAAGACGTGTAGGTGCACGACCGTACAAAAACTACACAAAAGAGATGTTGGACTTGGCGGTACAATATATAAAAGAAAAAAAAATGTCTTCAAGAGAAGCCGAACGCCACTTCGGCATACCACGGCGCACGTTATTAAACAAAAAAAATGAGAATCATCCAAAAAATGTAGGGAAACCTACATTGTTATCCGAGGAAGAAGAGGAAAACATTATAAAAGTTATAGTTGCAGCAGCGGACTTTGGTTGTCCTCTAACGAAGCTGGATTTAAGGCTGGTAGTCCATGGTTATTTAAAAAAAAATGGTCGTGATGAAATCTTTAACAACCAACCTCCCGGAAAGCAATGGGTAGAATGTTTCATGGAAAGGCATGAATCAAAACTGACAACGAGAACATGTCAAAATATAAAATTGGCTAGAGCAGAGAAAACAGTGGACGAATTCCTTGAATATTTTAACAATTTGGAAGAAACACTCAAAGATATTCCTTCAACGCATATATTAAATTTGGATGAAACTAATTTGAGCGATGATCCGGGCGCATCCAAATGTATTTTTAGGAGAGGAGTGAAGTATCCAGAGCGGATTTTGAACTCCACAAAAGGTGCTATTTCATTGATGTTTACAGCAACAGCTGCTGGCCAGGTTTTACCTGCTTATGTGGTGTACAAAGCTGAATGTCTTTATTCTGAATGGATTTCTGGAGGCCCCCGAGATACGCGCTATAATCGAACAAAGTCAGGATGGTTCGATTCCGCCACTTTTGAAGAATATTTTAAGAAAGTTGTCGTACCATGGGCAGACAGTTTACCAGGCAAGAAGGTAGTTATCTGTGATAATCTTTCCAGTCATCTCAGCGTCACCGTTATTCAACTTTGCGAGGTACACAATATATCTTTCGTATTTATACCCACGAACTCCACACATCTTACACAGCCTCTTGATGTAGCTTTTTTTGCTCCCCTAAAAAAGGCTTGGCGAAAAGTTCTACTTGAATACAAAATGGAAAATCCTAATCAAACTGCATTAAATAAAAATCATTTTCCGAAAATGTTGACAAATTTGATTAATAGTATACAACTGAAAGAGGCCAAAATTATCCAAAGTGGGTTTAAAGCCACCGGAATATTTCCATTAAACCCACGTCAAGTTCTTCAGCGCCTTCCTGATTTTGCTGACAATCTTGGAAATTATAGTGTAGATTCTGCATTACTGGATTATCTAAAAAAGGTGCGACAACCGAAGCCAGTCTCTGTACGTCGTAATAAAAAAGTGCCCGTGGAACCTGGGAAATCAGTAACGATTGATGATTTCTATCACATTCTAAGAGAGAAAGAAGCAGCTGCTGCAAATAAGAAATCACAGAAAGAAAAGAATACGGGAGTGGGAAAAAACAAAAATAAAAAAAAACAAAAAGAAAATAATGAAAATGAACAAGAGTTATCGCAACTCAATGATGCTAACGAATGTATACCAAGTGATGGTCTAAGTGACGATAAAATGATAAATAGCATTGATCAAAACAACTGTTCTGATATTTTTCCAGAAGAAAACTATTTAGTCGATTACTTTTTTGAGCAAGATGTCGTAACCGAACTTCTCGACTTAAAAGACACCACCGAGAATCACGACACAGAAGTTAAAAACGAAGAATTAAAAAATATCTACAAAGAAATCGGTGCTAACCTGTCAGACGATGAAACGATGAGTATTATAAAACCAGACCAAAATAATGAAATTCGTTTTTTGGACGAAGTTACAGGAGAAATTGTAAAATCATCTTGTCAAGGAAGACCAATAGCTCCACCAAGTTTGGCTCCACCAAGTTTGTCTGTCCTTTGTACGAAAAATATCAACAATCTTTTTGGCTCCTCAATACAGGAAGTTTTTGACACCCAAAACTCAAAAAACAATTTGACAAAAAAATTAATAATCTCTAATGAAAAGGTACATTTTGATTACAAAATAACATGTCCCGAAAAAGTGAACAAATTTAAAAAACTTCTAAGCGGAGCAGACATTATAAGACATTCAGCTTTGCAGATGAAATTGGCTCCCATGAAAAAACGAAAAGGAGTAAAACATGAAGTTAATATTTATGAAAAAAATACTAGTGATGAACAGAGTACATCAATTGACGCAACAAGAAAATGTAAACGAAATGATTCTAAAAATTCAGAGAGTCAAAGAGTTCAGAAAAAAGTGACAAAATGCATTTTTTTTACAAAAGATGATACTGCAAGTAAAGAAAGACCAGAAATAAGCAATAAGGTAACGAAGCGTGAAGAAAAGGCAAAATCAAAGAAGAGGGCTGTAAAAAAGAAGATAAACTTGAAAATGGAAACAAGCTCCGAAGTTTCAGATACTATGAGCATAGCAAACACAGATGATTCATTTGATGGAACATTTGATGAATATATCACAACTTTTCTTGAAGAACAAAACGAGAAAGAAAATATGGATCCAGAATCAGATGTTGTACCATTTGGGTGCAGTGACTTTCTATATTGCGCAGATAATAACTACAATAAAGATGATTGGGTTGTTGCCAAGTTTGCAACGAAGAAGAGTCTGAAACACTACGTCGGACGCATTTTAAGAACTGACACACAGAAATGGTCCTTCAAGGAGATAGCGTACCAGGCGGAGCTGAACCGGCATGAAGACACGGACTCCGCAGCTGACGCGTACGTCCTCTGTGATGAGGATCGGTACACCAAGAAGAGGAGTATTGACGAGCTGCGTGCTATGATATACGAAAGAGGTGAATGCCATCCGCCTAGGACTGACGACGCATTTTTGCTGCGATTTCTCAGAGCTAGAAAGTCCATACCAGCTCGAGCTCATAGACTGTTAGTTAGATACTGTACCTTCAGGGACCAGAACCCACATCTCTGGCGAGATATCGACTGGTTCAGTCTCACGCGGCTGGGCAACATATTCGAAGGTGTGCTTTACGATAGGCCAGATGTGGGCAGACTGATTATATGTAGGCTTGGTAAATGGGACCCCAGTGAGATCCCAGTAGAAGACCTCATTCGAGGCTCTCTCCTTCTTCTGGAAGTGGGCATCATACAGCCTAAGCTGCAGATTCTGGGTGGAACAGCTCTACTGGATTGCGAGGGTCTCACGATGCGGCACATGAGACAGCTGTCACCCACGATCGCTGCTCAGGCCATGAATGTTATGGGGTACGCATTCCCGGTCCACCAGCGGGGCATCCACATCATCAACTGTTCACGGTTCTTCGAGACCCTGTTCCCTCTGTTCAAGCGGTTTGCACCAGCTGAAGATCTGTGGAAGAAGGTTCACTTCCACGGCTATGACTTCACTTCTTTGCACAGATTCATAGACCCAGAATGCCTTCCTAGAAGGTACGGTGGCTGCCAAGATGAGACCTCTCTAGAGACATGGCTGACGAAGATCAGATATTACAAGAACAAGGAGTTTGATGAGGATATGAGGACTCTGGGATACTACGCCGATTGA
Protein Sequence
MAKTTKKKKSRRRVGARPYKNYTKEMLDLAVQYIKEKKMSSREAERHFGIPRRTLLNKKNENHPKNVGKPTLLSEEEEENIIKVIVAAADFGCPLTKLDLRLVVHGYLKKNGRDEIFNNQPPGKQWVECFMERHESKLTTRTCQNIKLARAEKTVDEFLEYFNNLEETLKDIPSTHILNLDETNLSDDPGASKCIFRRGVKYPERILNSTKGAISLMFTATAAGQVLPAYVVYKAECLYSEWISGGPRDTRYNRTKSGWFDSATFEEYFKKVVVPWADSLPGKKVVICDNLSSHLSVTVIQLCEVHNISFVFIPTNSTHLTQPLDVAFFAPLKKAWRKVLLEYKMENPNQTALNKNHFPKMLTNLINSIQLKEAKIIQSGFKATGIFPLNPRQVLQRLPDFADNLGNYSVDSALLDYLKKVRQPKPVSVRRNKKVPVEPGKSVTIDDFYHILREKEAAAANKKSQKEKNTGVGKNKNKKKQKENNENEQELSQLNDANECIPSDGLSDDKMINSIDQNNCSDIFPEENYLVDYFFEQDVVTELLDLKDTTENHDTEVKNEELKNIYKEIGANLSDDETMSIIKPDQNNEIRFLDEVTGEIVKSSCQGRPIAPPSLAPPSLSVLCTKNINNLFGSSIQEVFDTQNSKNNLTKKLIISNEKVHFDYKITCPEKVNKFKKLLSGADIIRHSALQMKLAPMKKRKGVKHEVNIYEKNTSDEQSTSIDATRKCKRNDSKNSESQRVQKKVTKCIFFTKDDTASKERPEISNKVTKREEKAKSKKRAVKKKINLKMETSSEVSDTMSIANTDDSFDGTFDEYITTFLEEQNEKENMDPESDVVPFGCSDFLYCADNNYNKDDWVVAKFATKKSLKHYVGRILRTDTQKWSFKEIAYQAELNRHEDTDSAADAYVLCDEDRYTKKRSIDELRAMIYERGECHPPRTDDAFLLRFLRARKSIPARAHRLLVRYCTFRDQNPHLWRDIDWFSLTRLGNIFEGVLYDRPDVGRLIICRLGKWDPSEIPVEDLIRGSLLLLEVGIIQPKLQILGGTALLDCEGLTMRHMRQLSPTIAAQAMNVMGYAFPVHQRGIHIINCSRFFETLFPLFKRFAPAEDLWKKVHFHGYDFTSLHRFIDPECLPRRYGGCQDETSLETWLTKIRYYKNKEFDEDMRTLGYYAD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00686273; iTF_00686274; iTF_00686275; iTF_00686276; iTF_00686277;
90% Identity
iTF_00686273;
80% Identity
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