Etes018549.1
Basic Information
- Insect
- Eulithis testata
- Gene Symbol
- -
- Assembly
- GCA_947507515.1
- Location
- OX382222.1:3914453-3916366[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 9.3e-11 4.7e-08 32.8 0.0 2 44 18 60 17 60 0.93
Sequence Information
- Coding Sequence
- ATGCCAAACTACTACGTACGAAAGGCGACAGCCACACGAGGCAACTGGGATGAAAAAGATTTAAAAAAAGCGATGGATGATGTACAAAAACAAACAATGTCCGTCTACAGAGCGTCAATTATGTACGACGTACCCAGAAAAACATTAGAAAGAAGACTGAAAACCAATAATGACACAAAGGGGCCTATGGGCCCAACTTCTACGTTCGGCACTGACAATGAAAAGCGACTATGTAAACACATAAAAGAAATGCAGTCCAAGGGTTTTCCCTTAACTATTGATGATACGAGAAAAATCGCATTTAAATTTGCGGAGCAATTAAAAATAAAACACAAATTCAATCCGACTTCTGAGAAGGCAGGCTACGATTGGTTACAGCTGTTTTTAAAAAGAAATCCTGACATTTCTTTGAGAAAATCAGAAGGAGTATCTTACGCTAGAAGTCAAGGCATGAACAGAACAGAAGTAAATGCTTATTTTGAAATGCTCGAGAGAACCCTGTATGAAAATGATTTGTTCGACAAACCTGGCAGTTTGTTTAACATGGATGAAACTGGATTGCAGCTGAACAATCGTCCAGGGCATGTTTTGGCTGAAAAAGGCTCCAAAGCTGTAGCTATGTCGACATCGACAGAGAAAGGAGAAACAATAACAGTCATTGCTTGTTGTAATGCGGAAGGAAACTTTTTGCCACCGGCTTGTATCATGAAAGGTCAAAGAAAAAAACCCGAGTTTGAAGATGGATTACCCCCGGGTTCACGTGTTTTTATGTCGCAAAAATCAGCTTACATAACCTCAGAAATATTTATGGAATGGATGAAGATTCAATTTTTGCCTCGAAAACCAGCTGGCAAAGTGCTTCTCTTGCTTGACGGTCACTCTACCCACTGCAATTCAGTTATGATGCTGGAATTTGCAAACGATAATGATATCATCTTACTGTCGATGCCAAGCCACACATCTCATTATCTGCAGCCGCTAGATGTTGCTGTCTTTAAGTCTCTCAAGACTTATTTTTACGAATCCTGTAGGCTATGGATAAAGCAGAATCCCGGACGCCGTCTGACAAGACATCAATTTGGTGCCTTGCTTAATCAAGGTTGGGGTAAATCAGCTACCTGCGCAAATGCAACTTCAGGGTTTAGAGCAACAGGCGTTTTCCCATTAAACCCAGGAGCCATACAGGACCACGCGTTTGGTGGAAACATCGAGGCACCTGTTGAAAGGCACCAGAATGACCATAACATAGAAAAAAGAACTGCTCAATCAACCACAGTGTCGGAAGGTTTAGATCCAGGTCCAAGTACTTCCGGAACACAACCATCGTATGGCAAACCTACACCGACAAGAATATTGAACGAAATATCACCACTGCCTAAAAAACTTTACGAAGTCCGCAAACGTGCAAAACAAGTAAGCATTcttttgacatctgacgatcatattgaaaagcgtaaaataaaagaaaaagaaaaatcagaaaagctagaaaaatccacaagactaaagatgataaaacaagaaatgaatgatagacctaaagaaaaaaagactgttaaacgtaaagctattcgtacaatatcagacagcagttgcgaagagatccctattattccttacgattcctcagaaagcggtaacgatgaaaaggaggaggacaactgcagaggctgcggagaaaattattataagactcaacttattgaagactggttgcaatgtaaaacatgtatgctgtgggtccacgaaaactgcacagagtacgaagacatgtgttcgagctgtggcagtaacaaaaaaaaggaggtcaaagagtctaagggcaagggaaagggcaaaaagagtagtggccatctacccccgaaccctatggccatcacccccgtatactgcgggagagatggccaatcgtga
- Protein Sequence
- MPNYYVRKATATRGNWDEKDLKKAMDDVQKQTMSVYRASIMYDVPRKTLERRLKTNNDTKGPMGPTSTFGTDNEKRLCKHIKEMQSKGFPLTIDDTRKIAFKFAEQLKIKHKFNPTSEKAGYDWLQLFLKRNPDISLRKSEGVSYARSQGMNRTEVNAYFEMLERTLYENDLFDKPGSLFNMDETGLQLNNRPGHVLAEKGSKAVAMSTSTEKGETITVIACCNAEGNFLPPACIMKGQRKKPEFEDGLPPGSRVFMSQKSAYITSEIFMEWMKIQFLPRKPAGKVLLLLDGHSTHCNSVMMLEFANDNDIILLSMPSHTSHYLQPLDVAVFKSLKTYFYESCRLWIKQNPGRRLTRHQFGALLNQGWGKSATCANATSGFRATGVFPLNPGAIQDHAFGGNIEAPVERHQNDHNIEKRTAQSTTVSEGLDPGPSTSGTQPSYGKPTPTRILNEISPLPKKLYEVRKRAKQVSILLTSDDHIEKRKIKEKEKSEKLEKSTRLKMIKQEMNDRPKEKKTVKRKAIRTISDSSCEEIPIIPYDSSESGNDEKEEDNCRGCGENYYKTQLIEDWLQCKTCMLWVHENCTEYEDMCSSCGSNKKKEVKESKGKGKGKKSSGHLPPNPMAITPVYCGRDGQS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01026045;
- 90% Identity
- iTF_00686292;
- 80% Identity
- -