Basic Information

Gene Symbol
jmj2
Assembly
GCA_947507515.1
Location
OX382193.1:4690936-4700413[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 4.9e-17 1.1e-13 51.5 0.0 16 89 902 974 886 974 0.82

Sequence Information

Coding Sequence
ATGTGTACGAAGTCGCGGGTATCAGCATACATAATCATCTTTTCCATCATAAACTTACCTCAAGCCGGATGGAAGAAATTACTTACAAACAACAAGGCTCATCTATACACGTTTCCCAGGAAAAGGCTGCAAGCCCAGCGAAAATTTGCTCAAGGGGCATACATTCCCCCTATAAATAATACATCCACAACTTCAGCCCCAGTTATGAATGCATCCCACAAGGCTGTCAATGCACCAGGTCCCGTTATTATTAACCACAGCAGCGCGAGGGACATATTTACACAGATGACTATAGGAAGAGCTCACCCACATATTGACTGGCATATAAGATTGAAGTATGAAAACAGTGTACCATCAAAACCTCTAGAAATTAATACAAAGAAAAAGTTGAAGGAAAGAAAAGCAAATAAAGTCAGTAGTTTAAAAAAAAAGTATTTGCTACGCAACAACCAAAAAATTACGGCTTATCCACGCCGCCTCAGTATCACCGACAGCGAAAGCGATACGCCACTGAGCAGGTTATCCGCAAAAATTATCAAAGAAAAACATGATGAAACAGTATCACCACCATTGCCGGGGGAAACCCGTCTGAGGCGAAACATACAACCTTACAGTAACCCTAACTACTCGTATAAATCGCTGGACGCTTCTGCAATAGCTGGTTGCTGTCTTTCCGATGTAGCCACAGAAAAACCTGATTCGGTTTCTGGCTCTATACCTCTCTCTGAAGTCACTACAAAATCGCTTTCTAAAAAAGCTAAGAAAAGGAAAACATTAAAAAACAAAGCTAATTTAAAACGAAATAAAGCTAAAATGCCAAAATGCGACGCAGCTTTTCCAGATGCTCAAACCAAGAGCCCTGCACTACCCAATGTTGAGGAAGTAGATACTGGATGTAGTACTTTTTCAGAAAACACGCAAGTGTTTACCGTGGTTAGTCCAGAAAGCTCGCCATCGCTTCTCGATAGCCATGTAAAAGATTCAGATTCTATGTCTCCAGATGTGCCATACGAAAAAACAGCTGAATGGGTTAGAACTCACCATCAGTCTGTCTATTCAACTGCTGTCGAAGAAAGTAATGCAACAATGGTTCAGACCAGGAAAAAAGTAGAAGACAGCAGTTCTACCCCAGACTCCAATGTCATACCAATGACTTTATGCACACAAAGTGATGATGCAAGCAGTTTGACTGTTTTGGGAAGAAGATTAACAGCTCTTGAGAGTTACATGTCATTATCTCAAGACAACACTGAATCAACAGTAATTGCCCCGGGCAGCAACGGTACCACTCCAGTACTGAGTGTCTCAGATCCCGATGCGCAAGTAAGCGACAAATACTTTAAAATTCCTCATTTGCCGGTGCGTTTCACTAAGCGGAAGAAAAGTATGAACAGCTGTTCTACTCGATTGTTTGATACACTTCAGACCTTGCTGAATGAACAGTCGGCAGAAAAGGAATCCGGTTATTGCAACATTTGCAAGCGCTGCGAGCTTTTGACTAAGTACAGAAAAGTTAGAAAACTTTTACCAGTCAGTGATCCTAACGAACCAGACATTCTAGATATGAAACCGAATGACGTATACAGTTTTGATTCTGACGAGGGTGGACTTAAATTTCTAAGACGAGGTCGAGAACTTGTCCGCAATGTGCTCACTACAAAAAGATTCCCGATATGGCTGAGCAATTTGGAAATGAACTTGAAGAAAACCATGTTTCAAGATGAACACAAACTTGGAACATTGAAAAGGACATTAGTTTTTGATAAAGATGATGTTTTAGACGAAATGGTAAATAAGGTTATTACACGAGTTGACTATTTGGCTCGGTGCATCGCCGAAGATAAAAAGGAACTAAATAAGGAGTCGTCTAGGCGGAGACTGCGGTCGGCGAAAGCATCACCACTTTGCGGAAAGAAGAAATTTTCACGAACGAAGAAATTGGTTCCTCGTCGGAAGCAAGCCTCGGCGGCGACACTTACCAAGCCCGCTTGCTCTAAGCCGCCCGTTGAACTTGAGCCAGAACGTGTTACTCCCACTGGTGCCCTTCCCAATTCACGTGATGTTGAGCCACGTCGTATGGTTCTCTGTTTGACACCCGTTGAAAAAATTATAAAACAATGTGGTTTGGCCCAGGCACTTCAGCCGCTACCTCTAGATGAGAAACTGAATCCTGTTAGTAAATTAAACATTAGCCAAACTTCACATCCCCCAAAAGTCGGGCAAGCCTTTGTGAGCCTAGAAAGAGTGAAGGAAAATATTCCACTGGCCCGAAAGTCAAGTATCAATAAGCCTTCTAGTTGTGGGGCCTCGAAAGATGACAAAGCCGCAGAGGAAGAACAAACACATTTCGATTTTCCACTTGATAAAGATTTTCATCGAGCCTCCAGCTCCTTATATCCAAATACTCAAAATAAACCACTTTCAATCGAGTCGTCGGAAGCATTACTTGTGTTCAGACCTACTCTAGAAGAGTTCAAGAATCCAATGGGGTACATTGAAAAAATTAAAGAAAGAGCTGGAATATACGGCATTTGCAAAATTATTCCTCCAGCCGGTTTCGATGTTCCTAGTCAACTGGACGATAGTGTCAAGTTCACTACAATATCTCAGTATCTGGGTCGCCTGTACCACCGATGGGGTCCGACGTCACGAGAGATGGCTATTATACAGACGTATGTCGCCATGCTTGCAAATACTAGGGAAAGAGACCAATTCACCAAAGCTCCATTGTTTGACGGAGTAGAAGTGGATTTGGTGAAATTGTATCATGTGGTCGTTGAAGAAGGAGGAATTGAAAAGATGTTGGCTGATAGCGAGAATTGGACTGTCGTAGCTGAGAAAATGGGCTTTGCCACATCTCGTACCAAACCTGATTACAAGAAACTTGAAAAACTGTACTGCAAACATGTGCTACCCTACGAGTCTCTATCAAATCACGACCGCCAAAAAATCCAAGAGAAGGTGGACAAAGTGTGGGCTGAACGCGTTAAAAGCATGATGCGTCGCGTTCAACGACCGTTGCATTACCAACAGCGCGTACTTGGCGAGACGAACTCTGATGATGAAGACGAACTGTGTCTCGACCCTGACATCGAAGCCGTAAGAGTTGCAGGCAAACAGTGCTTTGATCGCATAGAGGAGTGCACTGGAAAGGGACGCCCTATGAACCTCTCTATATACCGTCGGATTTCCGCGTGTCTAAAAGAAATGCGATTCCCAAATACACCGGACCCCACCACCCTTCAAATAGAGGATGAATACTGGAGCATCGTGACGTTGGGAAAGGAGCACACAGGCGTGTTATCGGCATTCATAGACACGTCTGTCAAAAATCTGGGCCACCCGAGCAACCCTAGCGAACCCGGAGGCAGCCATCCGTGGAACTTGAAGCGTCTAACTGAGAATCCAGACAACGTTCTGAGCTCGCTCGGCAAGACGCTGAGCGTGACTGTCCCGACGCTGTGTCTCAATCAACTGTTTAGCACTAACTGCTGGCACATGGATCCGCACCAGCTCGCTTGGATGGATTACATGCACGAGGGACCCACTAAAATATGGTACGCAGTAGCAGAGCGCGATGCTGCCGTGTTCCGGCGCGCGATGTTAATGCTTGTACCAGCCGTCGTGCAGCACAAAGGCATCTGGCTCGCGTCCGACACGACAATGGTACCGCCGAGCGAACTAATCGCGCACGGCGTGCAACTGCAGCGCGTCGAACAAAACTTCGGAGAGTACATAGTAGTGTTCCCCGGCGCGTACGCATCATCCATTGCCACAGGACTCACGATCTCGGAGAGCATCTACTTTGAGAACACGTCGTTTCTGACGAGGCTCGATACTACGTTCTTGCAAATGCGCGTGGACTGCGAACCGGCGATGTTCTCAAACACTTTACTCCTGATGCGAATGGCGAGTGACCCCGCCGTCAGTGGGGCCGTTCTGCCGCACGTTCGTTATCTACTCAAGGGGTTGTTTAAAAAGGAATTTGATGCACGACGAGAGGCTGAAGAACTGAAGTGCAACATTATCATGGATAAGAGTCGCGGAGATACAGCGCAGTGGCCGATTTCGTGGCCCTACCAGGAAGAATGCGTCATCTGTCGCTCTCCACTCATACTTTCCAAGAGCACGCAGTACAACGAGTCCCGTTCACTGATGTGCCTTGAGCACGCGTTACGAGTCTACAGATGCTCGCCCGTGGAGGAAAAGGCGCAGCCGCCGCCCGTCACGTTACTCTACTCTGCCAGCGAACTCAACGCAATCGTGGTGGCGCTTGAACGACGAATACTTACTATAAGTAACTAA
Protein Sequence
MCTKSRVSAYIIIFSIINLPQAGWKKLLTNNKAHLYTFPRKRLQAQRKFAQGAYIPPINNTSTTSAPVMNASHKAVNAPGPVIINHSSARDIFTQMTIGRAHPHIDWHIRLKYENSVPSKPLEINTKKKLKERKANKVSSLKKKYLLRNNQKITAYPRRLSITDSESDTPLSRLSAKIIKEKHDETVSPPLPGETRLRRNIQPYSNPNYSYKSLDASAIAGCCLSDVATEKPDSVSGSIPLSEVTTKSLSKKAKKRKTLKNKANLKRNKAKMPKCDAAFPDAQTKSPALPNVEEVDTGCSTFSENTQVFTVVSPESSPSLLDSHVKDSDSMSPDVPYEKTAEWVRTHHQSVYSTAVEESNATMVQTRKKVEDSSSTPDSNVIPMTLCTQSDDASSLTVLGRRLTALESYMSLSQDNTESTVIAPGSNGTTPVLSVSDPDAQVSDKYFKIPHLPVRFTKRKKSMNSCSTRLFDTLQTLLNEQSAEKESGYCNICKRCELLTKYRKVRKLLPVSDPNEPDILDMKPNDVYSFDSDEGGLKFLRRGRELVRNVLTTKRFPIWLSNLEMNLKKTMFQDEHKLGTLKRTLVFDKDDVLDEMVNKVITRVDYLARCIAEDKKELNKESSRRRLRSAKASPLCGKKKFSRTKKLVPRRKQASAATLTKPACSKPPVELEPERVTPTGALPNSRDVEPRRMVLCLTPVEKIIKQCGLAQALQPLPLDEKLNPVSKLNISQTSHPPKVGQAFVSLERVKENIPLARKSSINKPSSCGASKDDKAAEEEQTHFDFPLDKDFHRASSSLYPNTQNKPLSIESSEALLVFRPTLEEFKNPMGYIEKIKERAGIYGICKIIPPAGFDVPSQLDDSVKFTTISQYLGRLYHRWGPTSREMAIIQTYVAMLANTRERDQFTKAPLFDGVEVDLVKLYHVVVEEGGIEKMLADSENWTVVAEKMGFATSRTKPDYKKLEKLYCKHVLPYESLSNHDRQKIQEKVDKVWAERVKSMMRRVQRPLHYQQRVLGETNSDDEDELCLDPDIEAVRVAGKQCFDRIEECTGKGRPMNLSIYRRISACLKEMRFPNTPDPTTLQIEDEYWSIVTLGKEHTGVLSAFIDTSVKNLGHPSNPSEPGGSHPWNLKRLTENPDNVLSSLGKTLSVTVPTLCLNQLFSTNCWHMDPHQLAWMDYMHEGPTKIWYAVAERDAAVFRRAMLMLVPAVVQHKGIWLASDTTMVPPSELIAHGVQLQRVEQNFGEYIVVFPGAYASSIATGLTISESIYFENTSFLTRLDTTFLQMRVDCEPAMFSNTLLLMRMASDPAVSGAVLPHVRYLLKGLFKKEFDARREAEELKCNIIMDKSRGDTAQWPISWPYQEECVICRSPLILSKSTQYNESRSLMCLEHALRVYRCSPVEEKAQPPPVTLLYSASELNAIVVALERRILTISN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-