Basic Information

Insect: Eugnorisma glareosa
Gene Symbol: -
Assembly: GCA_947578425.1
Location: OX387984.1:8762095-8783822[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 4.6 4e+02 2.4 0.8 1 23 188 211 188 211 0.83

2 14 1.6 1.4e+02 3.9 0.4 5 21 275 291 274 292 0.92

3 14 0.021 1.9 9.8 0.1 1 23 303 326 303 326 0.94

4 14 0.0026 0.22 12.7 3.1 2 20 364 382 363 384 0.93

5 14 0.59 51 5.2 1.7 1 23 389 411 389 411 0.97

6 14 9 7.8e+02 1.5 2.2 1 20 660 678 660 679 0.89

7 14 6.6 5.7e+02 1.9 0.1 3 23 721 741 720 741 0.94

8 14 3.1 2.7e+02 2.9 0.5 1 23 764 785 764 785 0.81

9 14 0.0017 0.14 13.2 0.3 2 23 862 883 861 883 0.97

10 14 4.7e-07 4e-05 24.4 2.7 1 23 889 911 889 911 0.99

11 14 4.1e-05 0.0036 18.3 0.3 3 23 918 938 916 938 0.96

12 14 0.00061 0.052 14.6 1.1 2 23 945 967 944 967 0.96

13 14 1.3 1.1e+02 4.2 0.3 1 20 974 993 974 997 0.89

14 14 0.0011 0.099 13.8 2.1 3 23 1006 1026 1005 1027 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	4.6	4e+02	2.4	0.8	1	23	188	211	188	211	0.83
2	14	1.6	1.4e+02	3.9	0.4	5	21	275	291	274	292	0.92
3	14	0.021	1.9	9.8	0.1	1	23	303	326	303	326	0.94
4	14	0.0026	0.22	12.7	3.1	2	20	364	382	363	384	0.93
5	14	0.59	51	5.2	1.7	1	23	389	411	389	411	0.97
6	14	9	7.8e+02	1.5	2.2	1	20	660	678	660	679	0.89
7	14	6.6	5.7e+02	1.9	0.1	3	23	721	741	720	741	0.94
8	14	3.1	2.7e+02	2.9	0.5	1	23	764	785	764	785	0.81
9	14	0.0017	0.14	13.2	0.3	2	23	862	883	861	883	0.97
10	14	4.7e-07	4e-05	24.4	2.7	1	23	889	911	889	911	0.99
11	14	4.1e-05	0.0036	18.3	0.3	3	23	918	938	916	938	0.96
12	14	0.00061	0.052	14.6	1.1	2	23	945	967	944	967	0.96
13	14	1.3	1.1e+02	4.2	0.3	1	20	974	993	974	997	0.89
14	14	0.0011	0.099	13.8	2.1	3	23	1006	1026	1005	1027	0.95

Sequence Information

Coding Sequence: ATGGCGAAAATACCTAAAAAGTCTTTTCCACCAATCACCTACATTAATAAACAGAAAACAACTAAAAAGGTGTTTAAACAACCAGAACCTAGCATTGCAAAATTGGAAGGAACAACTATTTCAACACCACAAGAAGTTGATACAAGCGTTCTAAGAAAAATCAATGCATCGTCAGCTAAAGATATTGAACCAAAAATAAAAGTATCACCAAGAAAATTCGAGATTAATATTGAGGTGGAATCATGCGAAGATGGCGATGACGAATTTGCTAGCATTAGAGTCGAAAATGAATTGACACCAGGTAAAGATGTACTCAGTACAAACTCACGTCCAACACCTATAGTGCTCTCTCGAGAACACATACTTGATGAAGCCGACAACTTACTAGAAACTTCAACACAGGTCGCTGATAAAATCTTAAACATCTACCTAAGGAATACTATAGGCTATGAACAGAAAGAAACGCTAAAAAACGACGGATTTGAAAAACGAATCCAGGCAGCATTAGACGAGTGGAAGACATGGCAGTTCCGCAGTTTCCACAGAGAAGATCCTCTATTTTACAAATGTTATATCTGTACTAGATCCTGGTGGTTTCTGTCAGATTTCCGCACCCATCTGTCTTCAGTACACCCAAATGATAAGGAGATCAAGATTGTTTTGGAGAAGTATGAAACGCATGAGGTTAATTTATTAGCTTACCATGAAAGGCTTGTTGTGATTAAGGATATATACACTGAAGGTCTTTGTCACCGTTGCGGCAAAGACGATGCTGCTCATCAATTAACAGAGAGATTCAAGCAAAAATTTTACCAAAACAAAGGATGTACTAAACAGTTTTTTACCTGCATGGGTCTCAGAGATCATATACAGTCTTGCCCTGTATGTAAGTTAGAGGACAAGCCGTACAAGTGTGACATTTGTAAGTCAACATTTGACACAGAAGTTGAAGTGGCAAATCATTTAGTGATATCTCACTCGGTTCGGTCTGACATACCAATCATGACCCATAATAACCACTGTAAGAGGTGTTCAGAAAAATATATATGTAGATTCTTGCACAAATGTTGGCAGCAAAGCTCTTATTGTGAATGTCCTCACTGCTTCAGGAGCTTCTCAAACAACATGTCCTTAGAACTCCATCTGGAACATTCAAATATACCTTATGAATGTGAAATTTGCGACGTAGTGATGAGGTATAGTTGCAAGAAGTTTGAGCATATGTTGACTCACACCGACAACTTTATGGCTGTAAGGAAATGTGATAAATGCAAGGACCTGAATGTGTTTCTGAACAATGAGGATGCTGCAACCCATTCGAAATTGGAACACAAGTTCGAGGATACGCAACAGCAAAAAGTATTTCCTAAACTTGTAGTACCATCATCCTGCATATATAAGAGCTTAGCGGAATCTGAAATGGCTGAACAAGAACCGTTGGCAGAAGACAAAGAATCGATTCTGAAAGAAGAACAATTGTTACCAGCATATGAACAGAGATTACATGACTTGCAAGAATCAACAACAGACTTTATGACGGATGATTTTGTTGTCAAAGAAGAACCAGAAGACTACGAAGACAATCCACAACTTACAATCAAAGAAGAACCTTTAGACGAAGCAGAAAGCCAAATACAAGACGACGAAAATGAAACGGACAACTTTGAACACCAAATAACTGTGAAAGAAGAATTTATTGAACAAGAAGAAGATATAGACATAGAAGAAGAATATGATGGAGACATAATTAAACTCAACTTTAACATCGAAGACCTGTTGGTGAAGCAAGAATCTATTTTAGAGGATGCAGGAGAGGAATACTCTCAAGAACAGATAGAAACCCAAACAGAAGATGATGAAGTGTCACAAGACTTACCTCGACCAATGGAAGAAAAAGAAGATAATGAAGAATCTATGATAGAAGAACCAGAACCAGAAGTTAACAACCGAAGAGGTGGTAAAAGAAAAGAACTCAAATACCGTTGCACAAGATGCGGTTTTAAAGCGCACCATAAACAGTACAGGGCTCACATTGAGTTTAACTGTCCCAAAGACCCGATCAGACACAGGGACTATTTCTGTACAAAGTGTTATTGCACATTCAATTCGATGAAGAAATATTTGTCTCACTTTGAAAAGCATGGTTACAAACAAAGAGCGTGCCCGGAGTGTCTGAATCAATTTGAAAACTACTCCATTCTAGGTACACATTTGCAGTCACATATTAAACAGAATTTTGTTCGAGTGAAGTTGATTACGCATGCAGGAAGAGCAATGACTAAACCAGACTTTCAATGCAAGAAATGTTCCGAAACGATTTCTTTGGGAGAATTCTTTGAACACTGGGAGCTGCACATTAATGCCCAGCCTACTCATCCTATAAAAGTGACTTCTAGGCCTCCGCTGAAACGGGGAGACCTACATGAGACTATTATAAAGGAGTGCATTGTCCGTCTCCACAAAACTCCAAAAGAATGCAACCATTGCCACCGTTGGTTCAAGCGCGTCAACGAATGCAAGAGACACATCATTGAACACCTCCTAGCGGACGCTTACAGCCACAAACACATATTCAACGAGCTCAAATGCCAAATATGTGAAACTGGCTTCGCATTGCCGGAGAAATATAAGCAACACATGCGAGATCATGCGTCTCTACCTGTCTATAAGTGTGAATTATGTGATAGGACATTCAGTGATTCAAGTAACTTTACTAAGCATAAAAAAGTACATAATTTGAGAGTGATTATTTGTGATTTATGCGGCAAGAAGTTCCAGTCCAAGGTGTCTTTGGCGAAGCATATTGAGAAACATAAAACCACAGCGCCGATCACTTGTGAGCTTTGCAACAAAATCTTCTATTTCGACTCTTCATATCGCCGACATATACGATACTACCATGAAAAGACAACCCATGGATTCCGCTGCATAAACTGCGGACAGCGATTCAACACCTTAAAGGCGAAATGGGACCATATGTGGAGTGCCCACAAGGAACGCAAGCAAAAAGCCGACTGTCCGATATGCCACGAGTCTTTTAGAAAATTTTCTGATGTTCGCGCCCATGCCAGAGACCATCATTTAATGGAGGTTTCAGTTCTAAGTGTCAAAAAAGCGACTAATAGAGCTGTTAATGTAGATAAGTTCTTGAGTGATCCGACGACGATTAAAGTCGGTAGATCAGAGACTTTGGTAGTCTTTGATTCTGATTAG
Protein Sequence: MAKIPKKSFPPITYINKQKTTKKVFKQPEPSIAKLEGTTISTPQEVDTSVLRKINASSAKDIEPKIKVSPRKFEINIEVESCEDGDDEFASIRVENELTPGKDVLSTNSRPTPIVLSREHILDEADNLLETSTQVADKILNIYLRNTIGYEQKETLKNDGFEKRIQAALDEWKTWQFRSFHREDPLFYKCYICTRSWWFLSDFRTHLSSVHPNDKEIKIVLEKYETHEVNLLAYHERLVVIKDIYTEGLCHRCGKDDAAHQLTERFKQKFYQNKGCTKQFFTCMGLRDHIQSCPVCKLEDKPYKCDICKSTFDTEVEVANHLVISHSVRSDIPIMTHNNHCKRCSEKYICRFLHKCWQQSSYCECPHCFRSFSNNMSLELHLEHSNIPYECEICDVVMRYSCKKFEHMLTHTDNFMAVRKCDKCKDLNVFLNNEDAATHSKLEHKFEDTQQQKVFPKLVVPSSCIYKSLAESEMAEQEPLAEDKESILKEEQLLPAYEQRLHDLQESTTDFMTDDFVVKEEPEDYEDNPQLTIKEEPLDEAESQIQDDENETDNFEHQITVKEEFIEQEEDIDIEEEYDGDIIKLNFNIEDLLVKQESILEDAGEEYSQEQIETQTEDDEVSQDLPRPMEEKEDNEESMIEEPEPEVNNRRGGKRKELKYRCTRCGFKAHHKQYRAHIEFNCPKDPIRHRDYFCTKCYCTFNSMKKYLSHFEKHGYKQRACPECLNQFENYSILGTHLQSHIKQNFVRVKLITHAGRAMTKPDFQCKKCSETISLGEFFEHWELHINAQPTHPIKVTSRPPLKRGDLHETIIKECIVRLHKTPKECNHCHRWFKRVNECKRHIIEHLLADAYSHKHIFNELKCQICETGFALPEKYKQHMRDHASLPVYKCELCDRTFSDSSNFTKHKKVHNLRVIICDLCGKKFQSKVSLAKHIEKHKTTAPITCELCNKIFYFDSSYRRHIRYYHEKTTHGFRCINCGQRFNTLKAKWDHMWSAHKERKQKADCPICHESFRKFSDVRAHARDHHLMEVSVLSVKKATNRAVNVDKFLSDPTTIKVGRSETLVVFDSD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01063304;
90% Identity: -
80% Identity: -