Basic Information

Insect: Eugnorisma glareosa
Gene Symbol: -
Assembly: GCA_947578425.1
Location: OX387982.1:11542211-11547630[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.032 2.8 9.2 0.4 3 23 234 255 233 255 0.97

2 8 0.2 18 6.7 0.7 1 23 260 282 260 282 0.98

3 8 0.00016 0.014 16.5 2.6 1 23 286 308 286 308 0.98

4 8 0.026 2.2 9.5 0.3 1 23 321 344 321 344 0.89

5 8 0.00041 0.035 15.2 1.5 1 23 348 370 348 370 0.99

6 8 0.00029 0.025 15.6 2.5 2 23 403 424 402 424 0.96

7 8 0.0054 0.46 11.6 1.0 1 19 430 448 430 454 0.84

8 8 0.57 49 5.3 0.5 2 23 459 481 459 481 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.032	2.8	9.2	0.4	3	23	234	255	233	255	0.97
2	8	0.2	18	6.7	0.7	1	23	260	282	260	282	0.98
3	8	0.00016	0.014	16.5	2.6	1	23	286	308	286	308	0.98
4	8	0.026	2.2	9.5	0.3	1	23	321	344	321	344	0.89
5	8	0.00041	0.035	15.2	1.5	1	23	348	370	348	370	0.99
6	8	0.00029	0.025	15.6	2.5	2	23	403	424	402	424	0.96
7	8	0.0054	0.46	11.6	1.0	1	19	430	448	430	454	0.84
8	8	0.57	49	5.3	0.5	2	23	459	481	459	481	0.96

Sequence Information

Coding Sequence: ATGGCAAATACCTTGGACTTGAAGCTGGTGCTGAAACATCTCTCAACCGGAACACTTGGCGAAAACCTGTGCATAAATTGTCTGAAGCCGCTCCGGGAACAGTATGAGAATATTTTTACAAAAGTTTGTAAATATGACAAGGAGTATTGCATAGCGGACGTGCTCCGAATCATGTGTGATGTTGAGTTGTCAGAAACCGGTAACTACAATGTCTGCGTCAATTGTTTCATGATGGCATCCATGGCTTACAAGTTCTACTTACTATCTAAACGGAGCCATGAAATCCTCAACTTTTACACAAATGAACTTCTCAGCAACTTGGACCAAATACAGTTACCAGAAGAAACAATGAACAATACATTATGTATTTCCCTCCCTGAGATAGTAACAGAAACACCAATTTACGACTTTAATTTGCATGCTATAGGCAAAGAAATAAAGAGTGATAATGTAGAGCGTGTGAAAATTAAAAAGGAAGTCGTAGAAAAGGAAGAAGATGAAAAAGTGGTGGTTATTATACAAGACAACGGCAAGCCTTCGTTTTACCGGGTTAAACCAGATGGAGTTCTAACTGCCCTTGGAGATTATGAGGCAAAGAAATATACAAAAAAGTTTAATGCGTCAATGGTAGTACAGGTACAGCCTAAAGAAGATCGGCCTAAAAGAGGTAGGAAGAGAGGACCGATGTCATTGAAGCTTTGCACTCGGTGTCCGGTCAAATATAGGTTTATTGCTAAACTGAAGGAGCATATGAGATTGGAGCACAATGTTGTTCTTTACGTTTGTGAGGTGTGTAAAGCGCTTACAGAAGATGAACAGGAGTACCACAGCCACCTAAAGACTCACACAAATATACACCAGTGTGCCATCTGCAACATGGTGTTTAAGAAGAGGTCCACCATCATCAAGCATCTGAAGCGGCATGAGAGGATGAAGAATATTGCTTATAGCGACAATGCCCACATCTGTGAGCAATGTGGCAAGATCCTGGAAGACGAGGAATCCCTCCGCCTGCACAACGACAGCAAGCATTACAAGAAGTACACCTGCTACTACTGCGGACGGATGTACAAAGGAGAGATGAGCTTCGAGATGCATATCAAGAAACATGAGGATAATCTGGAGACAGGGAAATATAGACAAAACATTTACAAAAAGAAAGATGGCATTCCAACTGAGAAGGCAAAGCCAGTAATCAAGCGATGTATGTGTTCTACATGCGGCCGCCATTTTGTGGACGAGCGCGCCCTGCTGTGGCATCAACGGCTGCATAACAACGAGAGGCCTTACACTTGCAATGACTGCGGGCGCAGCTTCGTGTCGCTGAACCGCCGCAACCAGCACGCGCTGTGCGCGCACACGGCGCCCACGCGCCGCTGCCCGCTGTGCCCCGCGCTCTTCCATCTGCGCTCTATGGTCAACACGCACGTCAAGAAGGTGCACTTGAAACAACATAAGCGTCGCAACCGCATCAGTAAACATCAGAACGTGTTCTGGCGAACGGAGACCGTGCCCGTACAGGAGCTCAGTGTCGAGATACAGAACGATATACTGGAGCTGCAAGCTGCTAATAAGGACCAGGATTGGGTAAGACATGTCACAGGTTACGACTGCAAACATGCTACGGTAATACACTCGGCTGACCAATCTAGTCCTACCGTAAGGTGTGTGTGCGTGGAGATACACCTATTAAGATGGAAAGCATATGACGAAAGCGGAACAGGAAGCTGGAACAACAACAAGCCGCCGAGAAGATGCTGA
Protein Sequence: MANTLDLKLVLKHLSTGTLGENLCINCLKPLREQYENIFTKVCKYDKEYCIADVLRIMCDVELSETGNYNVCVNCFMMASMAYKFYLLSKRSHEILNFYTNELLSNLDQIQLPEETMNNTLCISLPEIVTETPIYDFNLHAIGKEIKSDNVERVKIKKEVVEKEEDEKVVVIIQDNGKPSFYRVKPDGVLTALGDYEAKKYTKKFNASMVVQVQPKEDRPKRGRKRGPMSLKLCTRCPVKYRFIAKLKEHMRLEHNVVLYVCEVCKALTEDEQEYHSHLKTHTNIHQCAICNMVFKKRSTIIKHLKRHERMKNIAYSDNAHICEQCGKILEDEESLRLHNDSKHYKKYTCYYCGRMYKGEMSFEMHIKKHEDNLETGKYRQNIYKKKDGIPTEKAKPVIKRCMCSTCGRHFVDERALLWHQRLHNNERPYTCNDCGRSFVSLNRRNQHALCAHTAPTRRCPLCPALFHLRSMVNTHVKKVHLKQHKRRNRISKHQNVFWRTETVPVQELSVEIQNDILELQAANKDQDWVRHVTGYDCKHATVIHSADQSSPTVRCVCVEIHLLRWKAYDESGTGSWNNNKPPRRC

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01093599;
90% Identity: iTF_00446681;
80% Identity: -