Basic Information

Insect: Eugnorisma glareosa
Gene Symbol: -
Assembly: GCA_947578425.1
Location: OX387973.1:4677355-4694371[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.0024 0.2 12.8 2.6 3 23 241 261 239 261 0.97

2 9 0.18 15 6.9 10.4 1 23 267 289 267 289 0.96

3 9 5.1e-05 0.0044 18.0 5.8 1 23 295 317 295 317 0.98

4 9 0.00046 0.04 15.0 1.5 1 23 323 345 323 345 0.97

5 9 9.5e-06 0.00082 20.3 0.9 1 23 351 373 351 373 0.97

6 9 2.1e-06 0.00018 22.4 0.1 1 23 379 401 379 401 0.98

7 9 7.3e-05 0.0064 17.5 0.4 1 23 406 428 406 428 0.96

8 9 0.7 61 5.0 3.6 3 19 436 452 435 458 0.90

9 9 3.6e-05 0.0031 18.5 0.4 1 23 563 585 563 585 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.0024	0.2	12.8	2.6	3	23	241	261	239	261	0.97
2	9	0.18	15	6.9	10.4	1	23	267	289	267	289	0.96
3	9	5.1e-05	0.0044	18.0	5.8	1	23	295	317	295	317	0.98
4	9	0.00046	0.04	15.0	1.5	1	23	323	345	323	345	0.97
5	9	9.5e-06	0.00082	20.3	0.9	1	23	351	373	351	373	0.97
6	9	2.1e-06	0.00018	22.4	0.1	1	23	379	401	379	401	0.98
7	9	7.3e-05	0.0064	17.5	0.4	1	23	406	428	406	428	0.96
8	9	0.7	61	5.0	3.6	3	19	436	452	435	458	0.90
9	9	3.6e-05	0.0031	18.5	0.4	1	23	563	585	563	585	0.97

Sequence Information

Coding Sequence: ATGTGTATGCCAACTCCTAACAATGTTTCGGGCTTCGGTTACTCGTGGGGCTTCACGAGTTCTGCGGACCTTACGAAGGGCGAAGTGGAAACACCGAGTAGTTTGAGCTATACTTTGGGCAATACGGTTTCCCCAGAAACAACTTTGACTGTTATGTCCCACAAGACCCCACAAGTACAAGAAAAAGCAGGTGCCGTCACAGTAGCGGTATCAAATGCAGGTGCACAACTAACCAGGGTGGTAACTACAGGCACACCAGTCTCAGGAAGACGGATGTTTGTGGTGAACGATGCCACAGCCCATACATTGAACAGGGTGACACAGCAGAATCAGACCACTACTATACATACGAACTTAGCAGCTAAGCCGTTTATGACACCGATAGGTCCCATCCAGCTAACGGCGGAAGAATGCAACGAAATTTTGATGAAGAGGGCTCTACAGGCCCAAGGCATCGCGACCCCGGTCATAGATGCGTCGCAACTAAACCATACGATATTAAACGGGGGCTTGAAGAGTCTAGCGGAGGCGACTCAGCAAACGCAGGCGGAAACGATTCAGACTACGACAGTACATCAGCATCATTTGTTACATGCGAAACAAGAGCCTGGGACTACTAATAATTCGCCTAAAACGGTATATTCGCAGACGGAGCTGATGAACACGAACTCGGTGATGACGACAGCGCCTCCTGCCACTGTGAAGGAGCGCCCTTACGGCTGCGACGAGTGTGGCAAGTCTTTCCTGCTCAAACATCATCTCACGACGCATGCGAGAGTACATACAGGTGAGCGACCGCACTCGTGCGTTCACTGCGCCAAGACATTCGCGCACAAGCATTGCCTCAACACCCACCTCTTACTGCACTCTTCTAACCGCCCGTACCGCTGCCCCGAGTGCAAGAAAACCTTCACGCTCAAACACCACCTACTCACACACTCAAGGGTACACAGTCGAGAGCGTCCATTCGTTTGCAACGAGTGCGGGCGCGGGTTCCCTCTCAAGCGCCACCTGGTGACGCACAGCAAGTACCACGCGGGCGAGCGGCCCTACGTCTGTAGCGACTGTGGAGAGAGCTTTGCGCAGAAGGAGCACCTAGTAATGCACAGTCGTTTCCACGGCTCCCTCTCACCATACGTTTGTCCAGACTGCGGCGTGACGTTTGCGCGCAAGTTCCAGCTCGTGAACCACGGGCGAGTGCACGGGCGAGTCCCTCACGCGTGTCCCGTGTGCGGCAAGGAGTTCCTACAGAAGAGAACACTTGTCGCGCATATGAAAATCCATACAGGGGAAGGTGCAGTTGCCTGTTTAGAATGTGGTGAAGCCTTCAAATGCAAGTCAGAGTTGCAGCAACACTGTAAAATGACGCGGCACTGTCTACAATCGACGCAATCTCAACAGCAACAACAACAACAGCAACAACAGCAACAGCAGCAACAACAACAACAGCAACAAGCACAACAACAAGCTCAGCAACAGGCGCAACAGCAAGCACAGCAACAAGCTCAGCAGCAGCAGCAACAGCAACAACAACAACAACAACAGCAGCAACAACAACAACAACAACAGCAGCAGCAACAACAACAGCAACAAGCAACTGTGATAAAACAAGATGACTTTAAACCGCAAATTGTACAGGTTATTGGTGCAGACGGTCAAATAGTATCAGAGAAAACGACACCGGGATATGCGTGTCCAGAGTGTGGTTCCTGTTTCAACACGAAGGAGGCGCTGTCGCTGCACGTGCGCCTGCACGCGGGCGACCGCACGTGCGTCACCGACCTGTGCGCGCTCACCGCGGCGCTGCAGCCCGGCCTGGTCGCCGCGCACTCTGCACACAGTATGTATGCTAGGTCACCCTCAGGACGCGCTGTCGCTGCACGTGCGCCTGCACGCGGGCGACCGCACGACGCGCTGTCGCTGCACGTGCGCCTGCACGCGGGCGACCGCACGTGCGTCACCGACCTGTGCGCGCTCACCGCGGCGCTGCAGCCCGGCCTGGTCGCCGCGCACTCTGCACACAGTATGTATGCTAGGTCACCCTCAGGACGCGCTGTCGCTGCACGTGCGCCTGCACGCGGGCGACCGCACGACGCGCTGTCGCTGCACGTGCGCCTGCACGCGGGCGACCGCACGTGCGTCACCGACCTGTGCGCGCTCACCGCGGCGCTGCAGCCCGGCCTGGTCGCCGCGCACTCTGCACACAGTATGTATGCTAGGTCACCCTCAGGACGCGCTGTCGCTGCACGTGCGCCTGCACGCGGGCGACCGCACGACGCGCTGTCGCTGCACGTGCGCCTGCACGCGGGCGACCGCACGTGCGTCACCGACCTGTGCGCGCTCACCGCGGCGCTGCAGCCCGGCCTGGTCGCCGCGCACTCTGCACACAGTATGTATGCTAGGTCACCCTCAGGACGCGCTGTCGCTGCACGTGCGCCTGCACGCGGGCGACCGCACGACGCGCTGTCGCTGCACGTGCGCCTGCACGCGGGCGACCGCACGTGCGTCACCGACCTGTGCGCGCTCACCGCGGCGCTGCAGCCCGGCCTGGTCGCCGCGCACTCTGCACACAGTATGTATGCTAGGTCACCCTCAGGACGCGCTGTCGCTGCACGTGCGCCTGCACGCGGGCGACCGCACGACGCGCTGTCGCTGCACGTGCGCCTGCACGCGGGCGACCGCACGTGCGTCACCGACCTGTGCGCGCTCACCGCGGCGCTGCAGCCCGGCCTGGTCGCCGCGCACTCTGCACACAGTATGTATGCTAGGTCACCCTCAGGACGCGCTGTCGCTGCACGTGCGCCTGCACGCGGGCGACCGCACGTGCGTCACCGACCTGTGCGCGCTCACCGCGGCGCTGCAGCCCGGCCTGGTCGCCGCGCACTCTGCACACAGTATGTATGCTAG
Protein Sequence: MCMPTPNNVSGFGYSWGFTSSADLTKGEVETPSSLSYTLGNTVSPETTLTVMSHKTPQVQEKAGAVTVAVSNAGAQLTRVVTTGTPVSGRRMFVVNDATAHTLNRVTQQNQTTTIHTNLAAKPFMTPIGPIQLTAEECNEILMKRALQAQGIATPVIDASQLNHTILNGGLKSLAEATQQTQAETIQTTTVHQHHLLHAKQEPGTTNNSPKTVYSQTELMNTNSVMTTAPPATVKERPYGCDECGKSFLLKHHLTTHARVHTGERPHSCVHCAKTFAHKHCLNTHLLLHSSNRPYRCPECKKTFTLKHHLLTHSRVHSRERPFVCNECGRGFPLKRHLVTHSKYHAGERPYVCSDCGESFAQKEHLVMHSRFHGSLSPYVCPDCGVTFARKFQLVNHGRVHGRVPHACPVCGKEFLQKRTLVAHMKIHTGEGAVACLECGEAFKCKSELQQHCKMTRHCLQSTQSQQQQQQQQQQQQQQQQQQQQAQQQAQQQAQQQAQQQAQQQQQQQQQQQQQQQQQQQQQQQQQQQQQATVIKQDDFKPQIVQVIGADGQIVSEKTTPGYACPECGSCFNTKEALSLHVRLHAGDRTCVTDLCALTAALQPGLVAAHSAHSMYARSPSGRAVAARAPARGRPHDALSLHVRLHAGDRTCVTDLCALTAALQPGLVAAHSAHSMYARSPSGRAVAARAPARGRPHDALSLHVRLHAGDRTCVTDLCALTAALQPGLVAAHSAHSMYARSPSGRAVAARAPARGRPHDALSLHVRLHAGDRTCVTDLCALTAALQPGLVAAHSAHSMYARSPSGRAVAARAPARGRPHDALSLHVRLHAGDRTCVTDLCALTAALQPGLVAAHSAHSMYARSPSGRAVAARAPARGRPHDALSLHVRLHAGDRTCVTDLCALTAALQPGLVAAHSAHSMYARSPSGRAVAARAPARGRPHVRHRPVRAHRGAAARPGRRALCTQYVC

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01533346;
90% Identity: -
80% Identity: -