Basic Information

Insect: Eugnorisma glareosa
Gene Symbol: -
Assembly: GCA_947578425.1
Location: OX387984.1:6414572-6432337[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 3.6 3.1e+02 2.8 0.1 2 23 287 309 286 309 0.91

2 8 3.3e-05 0.0029 18.6 2.3 1 23 316 338 316 338 0.98

3 8 0.37 32 5.9 0.1 3 23 373 394 372 394 0.91

4 8 0.034 3 9.1 0.4 2 23 399 420 398 420 0.95

5 8 0.25 22 6.4 1.5 3 23 462 482 461 482 0.91

6 8 0.0027 0.24 12.6 1.2 1 23 515 538 515 538 0.94

7 8 9.9e-05 0.0085 17.1 0.9 2 23 575 596 574 596 0.97

8 8 1.2e-06 0.00011 23.1 1.8 1 23 602 624 602 624 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	3.6	3.1e+02	2.8	0.1	2	23	287	309	286	309	0.91
2	8	3.3e-05	0.0029	18.6	2.3	1	23	316	338	316	338	0.98
3	8	0.37	32	5.9	0.1	3	23	373	394	372	394	0.91
4	8	0.034	3	9.1	0.4	2	23	399	420	398	420	0.95
5	8	0.25	22	6.4	1.5	3	23	462	482	461	482	0.91
6	8	0.0027	0.24	12.6	1.2	1	23	515	538	515	538	0.94
7	8	9.9e-05	0.0085	17.1	0.9	2	23	575	596	574	596	0.97
8	8	1.2e-06	0.00011	23.1	1.8	1	23	602	624	602	624	0.99

Sequence Information

Coding Sequence: ATGTCGCATTTTTGTTATACATGTTTAAGCGAAGATCGGAAATTAAATCCTGTGGATACTTTGTATACTAAACCTACGCTTTTGGAATGGTTCAAAGATAGTAGATTTAAAGTCAATGTGGACCGCTTCCAATTATGTTGGGAGTGCTGTGCATTAATTATAAAATTAAGTAAATTCAAAAGACAAGTCTTCAAAGCTCAGCAAATACGGCTCAGAGTGCAAAAGAAAAAGTCAGCACGTTTGGTTAGTCAAACCAAACTGTGTGTATATGCAAAAGAAATCTACGACGGTGAATATGTGTTCGAAGAGAGCAACACTGAAATAACCCAAACCAAAAAAAGAACACCTAAAAGGAAGGAGCATACTTATTCTAAAACCAAAACGAAACTTAGGAAGGGTCATGATCCCGATCCTGAACCAAAAGAAAGTGTTCCGAATATCTATAATATCTACAATTATTATAATAATACTATTGTACCTGATATTATAAAAGAAACATCAAAAAATGTCAGCGAAACCAAAGACAAAACAAAAAGATTAAAAGAAAAAGAAAATGATTTAACGAAGGACCCAAAACTGTCCGCAATGCCCGTTGTATTAATAGATAAAGAAATAAAACAAGAGCTCATTGACGCTTATGAAGCTGAAACTGAATACAAAAGAGCAACGCCGGCTATGTTTATAGATGCAGGCCGCATTCGACCAAGCGTTATTGTCAAAGTAATACCAACTGATGACGCCGAGATAAACTGGGAGGATTCCAGTTTAAAATTCAGTGTTGTGAATTTAACTGAGGATCAAATGCTGAAAACTCGGGATTTAGATCGGAGTGAAAGAGTATATATGAAGCATTTTCTAAAGTGTGAATCTTGTGTCATTGGGTTTGCTGAAGAAACTGAATTGGACAAGCATAATAAAGAGAAACACAGCGAGCTCATCGGCAAGTTCGTGTGCCCAATATGCGACACCCGCTTCAACAAGGAGTGTCTCCTCACTCGACATGAAAAGACCCACTATTTTAGCTTTAAATGCCGTCAATGCGACTTTGAACATCATCGAAGATATGTGATTGAAATGCACGTGGTGAAGGAACATGATTTGACACCGTCGCCTGTTTGCGCGGCTTGCGATACGGAGTTTGGTACACAACAGCGTCTTAACGCTCATTTCGAGAAAGCTCACAAAGAGAGGCTGAAGTGCAACCAGTGTGCACAGAGTTTTGACACCGTGGACAGACTGAAGGATCATGCGACCTCGCACAAAGAAAAAGACGAGGTCGTAGAAATATTCCCGTGTGATCCATGCCAGGGCATTTTTGAGGGGAAGGCGGCATATCGCGCGCATGTGCAGTGCGTGCACAAGGAGTTAGCCCAGCACGCATATTGTGGACAATGCGATCTGCAGTTCGATACATTTGAGAAGTTTAAACATCATGTAGGAGAGCATAGTCTCTTTGATCAGTTGAAATATTTTGATCTCTCAAGCGGCAGTTCTGAAGATACTGTCGCGAGTGATATGAAGCGCGTGCATCGTATGTTGACCCATACCTGCGGTCTTTGTAAGAAGGGCTTTTCTGATGAAATGCGCCTGAAGGTGCACATTGAGCAGAAGCACCCTCAGGTGGTGACGACTGACCTTTCGCCGGCTCCATCGTCACCACTTCAAGATGTTTCTTTAGCCGGAGAGAACCATTCTGATGTAATCGAGGCGACGAAAGACAAGTCTTGCCCGATATGCAGCGAGGGATTTGTTACCCGCTGCGAGTTACTGGACCACCTGCGCACTCATAAAGCTGAAAAGCATTTTAAATGTGACGTATGCGACAAAAGCTTTGTTACCGAAATGATGTTGAGGAAACATTTTCGAACTCACGCATGGGACTACGACAGCGAATAA
Protein Sequence: MSHFCYTCLSEDRKLNPVDTLYTKPTLLEWFKDSRFKVNVDRFQLCWECCALIIKLSKFKRQVFKAQQIRLRVQKKKSARLVSQTKLCVYAKEIYDGEYVFEESNTEITQTKKRTPKRKEHTYSKTKTKLRKGHDPDPEPKESVPNIYNIYNYYNNTIVPDIIKETSKNVSETKDKTKRLKEKENDLTKDPKLSAMPVVLIDKEIKQELIDAYEAETEYKRATPAMFIDAGRIRPSVIVKVIPTDDAEINWEDSSLKFSVVNLTEDQMLKTRDLDRSERVYMKHFLKCESCVIGFAEETELDKHNKEKHSELIGKFVCPICDTRFNKECLLTRHEKTHYFSFKCRQCDFEHHRRYVIEMHVVKEHDLTPSPVCAACDTEFGTQQRLNAHFEKAHKERLKCNQCAQSFDTVDRLKDHATSHKEKDEVVEIFPCDPCQGIFEGKAAYRAHVQCVHKELAQHAYCGQCDLQFDTFEKFKHHVGEHSLFDQLKYFDLSSGSSEDTVASDMKRVHRMLTHTCGLCKKGFSDEMRLKVHIEQKHPQVVTTDLSPAPSSPLQDVSLAGENHSDVIEATKDKSCPICSEGFVTRCELLDHLRTHKAEKHFKCDVCDKSFVTEMMLRKHFRTHAWDYDSE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -