Egla026502.2
Basic Information
- Insect
- Eugnorisma glareosa
- Gene Symbol
- -
- Assembly
- GCA_947578425.1
- Location
- OX387974.1:20169442-20192605[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 0.0023 0.2 12.8 0.1 1 23 425 447 425 447 0.98 2 11 0.012 1 10.6 0.1 1 19 453 471 453 473 0.95 3 11 2.1 1.8e+02 3.5 0.4 2 19 481 498 480 500 0.92 4 11 2.1 1.8e+02 3.5 0.4 2 19 606 623 605 625 0.92 5 11 2.1 1.8e+02 3.5 0.4 2 19 731 748 730 750 0.92 6 11 2.1 1.8e+02 3.5 0.4 2 19 852 869 851 871 0.92 7 11 2.1 1.8e+02 3.5 0.4 2 19 950 967 949 969 0.92 8 11 9.3 8e+02 1.5 0.0 2 23 974 996 974 996 0.89 9 11 0.0017 0.15 13.2 1.6 1 23 1004 1026 1004 1026 0.97 10 11 0.013 1.1 10.4 0.7 1 23 1032 1057 1032 1057 0.91 11 11 5.3e-06 0.00046 21.1 0.1 2 23 1082 1103 1081 1103 0.97
Sequence Information
- Coding Sequence
- ATGGCAGCAGAAGTGATGAAGGTTGAGTTAGAGATGGAGACGTGTTGCGTCTGCGGCGGCGGTGGAGAACTGCTGTCGCCGGAGGAGCACGACGCGGGTGCTCCGCCCATGCAGGTGCCGCTGCGGACCATGTTAGTGCACCTCAACTCCAGCAAGGTGGTCCCTGAGGGGCGCCTATGTGGCAGTTGCATCCGCCGCACGCTGGAGTCATATGAGTTCAGCACGGCGCTGTCACAAAGAGGAGTCCCGCCACTCAGCGAGAAGATTCGAGCGCTGCGGAGGAGTCGAAAGCGGAGAGTAACATTTAACCAGCTCGAGACTTTGTGGGAGATTTTAAATGAGAACAGAGCTCTCGCAACTGGCTACAACAAATCTTCCCAAGCCCGAGAATATTCCAAAAGGATGTGGCAAATCGCGGCAGGCACATTGAACTCCCAGGGTGATGGTGCAGAAAAGGATTGGAAGGGCTGGTGTAAGTACTGGAATGACTATAAAAGCAAATTAAAAACTAAAGTCGCCAGTGCACGAGCCTCTCTGCACAGAACTGGAGGTGGGCCATCTATCGAAGGAAGATTGTCCGATTTGGAGTTAAAATTTCTCCAAATATTGATTAAGGATTTTGGGGTGGGTCTTCTTGGAGTTAGAGTGCAACCGTCATTTAATATTCCAACAGACGATCAAACTGAGGCAGGGAGCGCTCCACTATTATCTGCTCATAGTGAGCAATCTGAAAGCATACTGGCTCATCACTTGAACATGGAGTCAGTATTAGATATGCTAGTGATTCCTCCTGAGCCAACAGCGGCGGCGTCTACACCACCCGCGCCCGCGCTAGCAACGACCCCGCCCCCTCCGCCAGCCCGGACCCCATCCCCTCCATCAGCCCCGGCAGCGGCGCCACACGTCTCATCTACTCCGCGCCGTACCCCGCGACGGCGGCAGCGCCAGCGCCGGTTGGTACCTATGTCTGCAGCTACAGCAAGGCAATCCTTGGTTAATATGTCTGAGGAGAGAGTTAGACTTGAAGAAAGAAGAAACGCAATTTTAGAAAATATAGCTCTTGAACTCAGAGAAATAAAAGGCATATTAAATACTAGACTGCACGAGCTGACGCAGAAGATCGACGTGTTCATCGTGGTGGGCGGTGCGGGCGCGGGGGGGGCGTACTCCGAGGAGGACATCATCATGGTAGAGCGCGACACGCTGGCGGCGGCGGCGGCGGCTGATGATGATGACCTGGAGCGAGCCCGCAACGCGCGCGGCGACTCCGTCTACCAGTGCTCTGTGTGTCCGTTGTCCTTCCAGCGCGTGGCGGAGTACCGCGCGCACTCTGCGACTCACGCGGCCGACGCGCTGCACTCGTGCTGGACGTGCGGCGCGCAGTTCTCTACCCGCGCCGCCCTGCGCGAGCACGCGGGCGCGGCGTGCGGCGCCGCGCTGTGCTGCGCGCTGTGCGGCCGCGCACACGCGCACGCCGCCGAGCTGCGCCGCCACGAGGCCGCCTGTCCGCCGCGCTGCCCCGCCTGCAGTACGTATAGCTCACCTTGTCTCCACGCGCGCCGCACTGTGCTGCGCGCTGTGCGGCCGCGCACACGCGCACGCCGCCGAGCTGCGCCGCCACGAGGCCGCCTGTCCGCCGCGCTGCCCCGCCTGCAGTACCTCACCTTGTCTCCACGCGCGCCGCACTGTGCTGCGCGCTGTGCGGCCGCGCACACGCGCACGCCGCCGAGCTGCGCCGCCACGAGGCCGCCTGTCCGCCGCGCTGCCCCGCCTGCAGTACGTATAGCTCACCTTGTCTCCACGCGCGCCGCACTGTGCTGCGCGCTGTGCGGCCGCGCACACGCGCACGCCGCCGAGCTGCGCCGCCACGAGGCCGCCTGTCCGCCGCGCTGCCCCGCCTGCAGTACGTATAGCTCACCTTGTCTCCACGCGCGCCGCACTGTGCTGCGCGCTGTGCGGCCGCGCACACGCGCACGCCGCCGAGCTGCGCCGCCACGAGGCCGCCTGTCCGCCGCGCTGCCCCGCCTGCAGTACCTCACCTTGTCTCCACGCGCGCCGCACTGTGCTGCGCGCTGTGCGGCCGCGCACACGCGCACGCCGCCGAGCTGCGCCGCCACGAGGCCGCCTGTCCGCCGCGCTGCCCCGCCTGCAGTACGTATAGCTCACCTTGTCTCCACGCGCGCCGCACTGTGCTGCGCGCTGTGCGGCCGCGCACACGCGCACGCCGCCGAGCTGCGCCGCCACGAGGCCGCCTGTCCGCCGCGCTGCCCCGCCTGCAGTACGTATAGCTCACCTTGTCTCCACGCGCGCCGCACTGTGCTGCGCGCTGTGCGGCCGCGCACACGCGCACGCCGCCGAGCTGCGCCGCCACGAGGCCGCCTGTCCGCCGCGCTGCCCCGCCTGCAGTACCTCACCTTGTCTCCACGCGCGCCGCACTGTGCGGCCGCGCACACGCGCACGCCGCCGAGCTGCGCCGCCACGAGGCCGCCTGTCCGCCGCGCTGCCCCGCCTGCAGTACGTATAGCTCACCTTGTCTCCACGCGCGCCGCACTGTGCTGCGCGCTGTGCGGCCGCGCACACGCGCACGCCGCCGAGCTGCGCCGCCACGAGGCCGCCTGTCCGCCGCGCTGCCCCGCCTGCAGTACGTATAGCTCACCTTGTCTCCACGCGCGCCGCACTGTGCTGCGCGCTCTCACCTTGTCTCCACGCGCGCCGCACTGTGCTGCGCGCTGTGCGGCCGCGCACACGCGCACGCCGCCGAGCTGCGCCGCCACGAGGCCGCCTGTCCGCCGCGCTGCCCCGCCTGCAGTACGTATAGCTCACCTTGTCTCCACGCGCGCCGCACTGTGCTGCGCGCTGTGCGGCCGCGCACACGCGCACGCCGCCGAGCTGCGCCGCCACGAGGCCGCCTGTCCGCCGCGCTGCCCCGCCTGCAACCTACTGCTGTCGGACCGCGCGGCGCTATCGTCGCACGTGGCGGCACTGCACGGGCGCACGTCGCACGCGCCGCACGTGTGCCCGCAGTGCTTCCGCACGTGCGACACGCCCGAGCTGCTGAGCGCGCACCTGCTGCGGCATCGCCAGGCCAAGCAGTTCGTGTGCGGGTATGACGGCTGCATCCTGCGCTTTGGGACCAGGAGTAACCTGATGGCGCACATCCGCAAGTGCCACTCGAGCGACGCGCCGGAGGAGGCGGCCGAGCCCGAGCCGGCGCCGCTCGCGCCCCCGCCGCCCTCGTCCTCCACGTGCGATGATTGCGGACGCACGTTCGGCTCGGCGGCCGCCCTGAAGCGCCACGCGCGCGTGCACCGGCCGCCGCGCCACTACCAGCGCGCTGCACAGGTACGACTCTGTTTATTAATATTTATGCCACTCCATCTTAGCTAA
- Protein Sequence
- MAAEVMKVELEMETCCVCGGGGELLSPEEHDAGAPPMQVPLRTMLVHLNSSKVVPEGRLCGSCIRRTLESYEFSTALSQRGVPPLSEKIRALRRSRKRRVTFNQLETLWEILNENRALATGYNKSSQAREYSKRMWQIAAGTLNSQGDGAEKDWKGWCKYWNDYKSKLKTKVASARASLHRTGGGPSIEGRLSDLELKFLQILIKDFGVGLLGVRVQPSFNIPTDDQTEAGSAPLLSAHSEQSESILAHHLNMESVLDMLVIPPEPTAAASTPPAPALATTPPPPPARTPSPPSAPAAAPHVSSTPRRTPRRRQRQRRLVPMSAATARQSLVNMSEERVRLEERRNAILENIALELREIKGILNTRLHELTQKIDVFIVVGGAGAGGAYSEEDIIMVERDTLAAAAAADDDDLERARNARGDSVYQCSVCPLSFQRVAEYRAHSATHAADALHSCWTCGAQFSTRAALREHAGAACGAALCCALCGRAHAHAAELRRHEAACPPRCPACSTYSSPCLHARRTVLRAVRPRTRARRRAAPPRGRLSAALPRLQYLTLSPRAPHCAARCAAAHTRTPPSCAATRPPVRRAAPPAVRIAHLVSTRAALCCALCGRAHAHAAELRRHEAACPPRCPACSTYSSPCLHARRTVLRAVRPRTRARRRAAPPRGRLSAALPRLQYLTLSPRAPHCAARCAAAHTRTPPSCAATRPPVRRAAPPAVRIAHLVSTRAALCCALCGRAHAHAAELRRHEAACPPRCPACSTYSSPCLHARRTVLRAVRPRTRARRRAAPPRGRLSAALPRLQYLTLSPRAPHCAAAHTRTPPSCAATRPPVRRAAPPAVRIAHLVSTRAALCCALCGRAHAHAAELRRHEAACPPRCPACSTYSSPCLHARRTVLRALTLSPRAPHCAARCAAAHTRTPPSCAATRPPVRRAAPPAVRIAHLVSTRAALCCALCGRAHAHAAELRRHEAACPPRCPACNLLLSDRAALSSHVAALHGRTSHAPHVCPQCFRTCDTPELLSAHLLRHRQAKQFVCGYDGCILRFGTRSNLMAHIRKCHSSDAPEEAAEPEPAPLAPPPPSSSTCDDCGRTFGSAAALKRHARVHRPPRHYQRAAQVRLCLLIFMPLHLS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -